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Aliases for C16orf92 Gene

Aliases for C16orf92 Gene

  • Chromosome 16 Open Reading Frame 92 2 3 5

External Ids for C16orf92 Gene

Previous GeneCards Identifiers for C16orf92 Gene

  • GC16P029944
  • GC16P027695

Summaries for C16orf92 Gene

GeneCards Summary for C16orf92 Gene

C16orf92 (Chromosome 16 Open Reading Frame 92) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C16orf92 Gene

Genomics for C16orf92 Gene

Regulatory Elements for C16orf92 Gene

Promoters for C16orf92 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around C16orf92 on UCSC Golden Path with GeneCards custom track

Genomic Location for C16orf92 Gene

Chromosome:
16
Start:
30,023,334 bp from pter
End:
30,027,736 bp from pter
Size:
4,403 bases
Orientation:
Plus strand

Genomic View for C16orf92 Gene

Genes around C16orf92 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C16orf92 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C16orf92 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C16orf92 Gene

Proteins for C16orf92 Gene

  • Protein details for C16orf92 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96LL3-CP092_HUMAN
    Recommended name:
    Uncharacterized protein C16orf92
    Protein Accession:
    Q96LL3
    Secondary Accessions:
    • Q494R8

    Protein attributes for C16orf92 Gene

    Size:
    132 amino acids
    Molecular mass:
    14383 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C16orf92 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C16orf92 Gene

Proteomics data for C16orf92 Gene at MOPED

Post-translational modifications for C16orf92 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C16orf92 Gene

No data available for DME Specific Peptides for C16orf92 Gene

Domains & Families for C16orf92 Gene

Protein Domains for C16orf92 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C16orf92: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C16orf92 Gene

Function for C16orf92 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C16orf92 Gene

Localization for C16orf92 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C16orf92 Gene

Membrane; Single-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C16orf92 Gene COMPARTMENTS Subcellular localization image for C16orf92 gene
Compartment Confidence
cytosol 1
extracellular 1
mitochondrion 1
nucleus 1
peroxisome 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for C16orf92 Gene

Pathways & Interactions for C16orf92 Gene

SuperPathways for C16orf92 Gene

No Data Available

Interacting Proteins for C16orf92 Gene

Gene Ontology (GO) - Biological Process for C16orf92 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C16orf92 Gene

Drugs & Compounds for C16orf92 Gene

No Compound Related Data Available

Transcripts for C16orf92 Gene

mRNA/cDNA for C16orf92 Gene

Unigene Clusters for C16orf92 Gene

Chromosome 16 open reading frame 92:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C16orf92 Gene

ExUns: 1 ^ 2a · 2b ^ 3 ^ 4
SP1:
SP2: -

Relevant External Links for C16orf92 Gene

GeneLoc Exon Structure for
C16orf92
ECgene alternative splicing isoforms for
C16orf92

Expression for C16orf92 Gene

mRNA expression in normal human tissues for C16orf92 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for C16orf92 Gene

This gene is overexpressed in Testis (x37.6) and Brain - Cerebellum (x4.6).

SOURCE GeneReport for Unigene cluster for C16orf92 Gene Hs.651588

genes like me logo Genes that share expression patterns with C16orf92: view

Primer Products

In Situ Assay Products

No data available for Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for C16orf92 Gene

Orthologs for C16orf92 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C16orf92 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia C25H16orf92 35
  • 78.18 (n)
  • 70 (a)
dog
(Canis familiaris)
Mammalia C6H16orf92 35
  • 78.48 (n)
  • 68.18 (a)
C16orf92 36
  • 54 (a)
OneToOne
mouse
(Mus musculus)
Mammalia 4930451I11Rik 35
  • 73.39 (n)
  • 66.06 (a)
4930451I11Rik 16
4930451I11Rik 36
  • 55 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia C16H16orf92 35
  • 99.09 (n)
  • 99.09 (a)
C16orf92 36
  • 99 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1563217 35
  • 75.15 (n)
  • 66.36 (a)
Species with no ortholog for C16orf92:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C16orf92 Gene

ENSEMBL:
Gene Tree for C16orf92 (if available)
TreeFam:
Gene Tree for C16orf92 (if available)

Paralogs for C16orf92 Gene

No data available for Paralogs for C16orf92 Gene

Variants for C16orf92 Gene

Structural Variations from Database of Genomic Variants (DGV) for C16orf92 Gene

Variant ID Type Subtype PubMed ID
nsv905717 CNV Loss 21882294
dgv2668n71 CNV Loss 21882294

Variation tolerance for C16orf92 Gene

Residual Variation Intolerance Score: 68.8% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.54; 11.68% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C16orf92 Gene

HapMap Linkage Disequilibrium report
C16orf92

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for C16orf92 Gene

Disorders for C16orf92 Gene

Relevant External Links for C16orf92

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C16orf92

No disorders were found for C16orf92 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C16orf92 Gene

Publications for C16orf92 Gene

  1. Biological insights from 108 schizophrenia-associated genetic loci. (PMID: 25056061) (Nature 2014) 3 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for C16orf92 Gene

Sources for C16orf92 Gene

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