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Aliases for C16orf91 Gene

Aliases for C16orf91 Gene

  • Chromosome 16 Open Reading Frame 91 2 3
  • Cattle Cerebrum And Skeletal Muscle-Specific Protein 1 Family Member 2 3
  • CCSMST1 3 4
  • Up-Regulated In Lung Cancer 5 3
  • Protein CCSMST1 3
  • URLC5 3
  • Gs103 3

External Ids for C16orf91 Gene

Previous GeneCards Identifiers for C16orf91 Gene

  • GC16M001411
  • GC16M001469
  • GC16M001396

Summaries for C16orf91 Gene

GeneCards Summary for C16orf91 Gene

C16orf91 (Chromosome 16 Open Reading Frame 91) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C16orf91 Gene

Genomics for C16orf91 Gene

Regulatory Elements for C16orf91 Gene

Genomic Location for C16orf91 Gene

Start:
1,419,744 bp from pter
End:
1,420,800 bp from pter
Size:
1,057 bases
Orientation:
Minus strand

Genomic View for C16orf91 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C16orf91 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C16orf91 Gene

Proteins for C16orf91 Gene

  • Protein details for C16orf91 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q4G0I0-CSMT1_HUMAN
    Recommended name:
    Protein CCSMST1
    Protein Accession:
    Q4G0I0
    Secondary Accessions:
    • Q96RZ0

    Protein attributes for C16orf91 Gene

    Size:
    132 amino acids
    Molecular mass:
    15004 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAK61280.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; Sequence=EAW85657.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

neXtProt entry for C16orf91 Gene

Proteomics data for C16orf91 Gene at MOPED

Post-translational modifications for C16orf91 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C16orf91 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C16orf91 Gene

Domains for C16orf91 Gene

Protein Domains for C16orf91 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

Q4G0I0

UniProtKB/Swiss-Prot:

CSMT1_HUMAN :
  • Q4G0I0
Family:
  • Belongs to the CCSMST1 family.
genes like me logo Genes that share domains with C16orf91: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for C16orf91 Gene

Function for C16orf91 Gene

Phenotypes for C16orf91 Gene

GenomeRNAi human phenotypes for C16orf91:
genes like me logo Genes that share phenotypes with C16orf91: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C16orf91

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C16orf91 Gene

Localization for C16orf91 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C16orf91 Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C16orf91 Gene COMPARTMENTS Subcellular localization image for C16orf91 gene
Compartment Confidence
mitochondrion 2
cytosol 1
endoplasmic reticulum 1
nucleus 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for C16orf91 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with C16orf91: view

Pathways for C16orf91 Gene

SuperPathways for C16orf91 Gene

No Data Available

Interacting Proteins for C16orf91 Gene

Gene Ontology (GO) - Biological Process for C16orf91 Gene

None

No data available for Pathways by source for C16orf91 Gene

Transcripts for C16orf91 Gene

mRNA/cDNA for C16orf91 Gene

(7) Selected AceView cDNA sequences:
(4) Additional mRNA sequences :
(2) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C16orf91 Gene

Chromosome 16 open reading frame 91:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C16orf91

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for C16orf91
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C16orf91 Gene

No ASD Table

Relevant External Links for C16orf91 Gene

GeneLoc Exon Structure for
C16orf91
ECgene alternative splicing isoforms for
C16orf91

Expression for C16orf91 Gene

mRNA expression in normal human tissues for C16orf91 Gene

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for C16orf91 Gene

SOURCE GeneReport for Unigene cluster for C16orf91 Gene Hs.58373

genes like me logo Genes that share expressions with C16orf91: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for C16orf91 Gene

Orthologs for C16orf91 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C16orf91 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C16orf91 36
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C25H16orf91 35
  • 75.76 (n)
  • 63.64 (a)
CCSMST1 36
  • 48 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C16orf91 36
  • 44 (a)
OneToOne
C6H16orf91 35
  • 70.11 (n)
  • 57.94 (a)
mouse
(Mus musculus)
Mammalia BC003965 35
  • 73.74 (n)
  • 65.91 (a)
BC003965 16
BC003965 36
  • 51 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C16orf91 36
  • 43 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1565784 35
  • 73.99 (n)
  • 63.64 (a)
Species with no ortholog for C16orf91:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C16orf91 Gene

ENSEMBL:
Gene Tree for C16orf91 (if available)
TreeFam:
Gene Tree for C16orf91 (if available)

Paralogs for C16orf91 Gene

Selected SIMAP similar genes for C16orf91 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with C16orf91: view

No data available for Paralogs for C16orf91 Gene

Variants for C16orf91 Gene

Sequence variations from dbSNP and Humsavar for C16orf91 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs3028428 -- 1,421,188(+) ttttt(-/T/TT)ccgtt upstream-variant-2KB
rs7184624 -- 1,419,446(+) gctgg(A/G)actcc downstream-variant-500B
rs7189073 -- 1,421,884(+) agatc(A/G)ggccg upstream-variant-2KB
rs7194077 -- 1,422,100(+) gtgga(A/G/T)gttgc upstream-variant-2KB
rs11552604 -- 1,420,448(-) GGGCC(A/G)TACCA reference, missense

Structural Variations from Database of Genomic Variants (DGV) for C16orf91 Gene

Variant ID Type Subtype PubMed ID
esv2422427 CNV Duplication 17116639
nsv471066 CNV Loss 18288195
dgv2505n71 CNV Loss 21882294
dgv2525n71 CNV Loss 21882294
nsv904950 CNV Loss 21882294
nsv904954 CNV Loss 21882294
dgv2527n71 CNV Loss 21882294
dgv2528n71 CNV Loss 21882294
dgv2529n71 CNV Loss 21882294
dgv2530n71 CNV Loss 21882294
dgv2531n71 CNV Loss 21882294
nsv904991 CNV Loss 21882294
nsv457331 CNV Loss 19166990
nsv904993 CNV Gain 21882294
nsv819844 CNV Gain 19587683
nsv819259 CNV Gain 19587683
dgv2532n71 CNV Loss 21882294
dgv2533n71 CNV Loss 21882294
dgv2534n71 CNV Loss 21882294
nsv817713 CNV Loss 17921354

Relevant External Links for C16orf91 Gene

HapMap Linkage Disequilibrium report
C16orf91

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C16orf91 Gene

Disorders for C16orf91 Gene

No disorders were found for C16orf91 Gene.

No data available for UniProtKB/Swiss-Prot for C16orf91 Gene

Publications for C16orf91 Gene

  1. Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16. (PMID: 11157797) Daniels R.J. … Higgs D.R. (Hum. Mol. Genet. 2001) 3 4
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for C16orf91 Gene

Sources for C16orf91 Gene

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