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Aliases for C16orf72 Gene

Aliases for C16orf72 Gene

  • Chromosome 16 Open Reading Frame 72 2 3
  • UPF0472 Protein C16orf72 3
  • PRO0149 3

External Ids for C16orf72 Gene

Previous GeneCards Identifiers for C16orf72 Gene

  • GC16P009094
  • GC16P009185
  • GC16P009106

Summaries for C16orf72 Gene

GeneCards Summary for C16orf72 Gene

C16orf72 (Chromosome 16 Open Reading Frame 72) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C16orf72 Gene

Genomics for C16orf72 Gene

Regulatory Elements for C16orf72 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for C16orf72 Gene

9,091,648 bp from pter
9,121,640 bp from pter
29,993 bases
Plus strand

Genomic View for C16orf72 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C16orf72 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C16orf72 Gene

Proteins for C16orf72 Gene

  • Protein details for C16orf72 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    UPF0472 protein C16orf72
    Protein Accession:
    Secondary Accessions:

    Protein attributes for C16orf72 Gene

    275 amino acids
    Molecular mass:
    30926 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C16orf72 Gene

Proteomics data for C16orf72 Gene at MOPED

Post-translational modifications for C16orf72 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C16orf72 Gene

ENSEMBL proteins:
REFSEQ proteins:

Antibody Products

No data available for DME Specific Peptides for C16orf72 Gene

Domains for C16orf72 Gene

Protein Domains for C16orf72 Gene


Suggested Antigen Peptide Sequences for C16orf72 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the UPF0472 family.
  • Belongs to the UPF0472 family.
genes like me logo Genes that share domains with C16orf72: view

No data available for Gene Families for C16orf72 Gene

Function for C16orf72 Gene

Gene Ontology (GO) - Molecular Function for C16orf72 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with C16orf72: view

Phenotypes for C16orf72 Gene

genes like me logo Genes that share phenotypes with C16orf72: view

Animal Model Products

CRISPR Products

miRNA for C16orf72 Gene

miRTarBase miRNAs that target C16orf72

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C16orf72

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for C16orf72 Gene

Localization for C16orf72 Gene

Subcellular locations from

Jensen Localization Image for C16orf72 Gene COMPARTMENTS Subcellular localization image for C16orf72 gene
Compartment Confidence
nucleus 3
cytosol 2

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C16orf72 Gene

Pathways for C16orf72 Gene

SuperPathways for C16orf72 Gene

No Data Available

Interacting Proteins for C16orf72 Gene

STRING Interaction Network Preview (showing 3 interactants - click image to see details)
Selected Interacting proteins: ENSP00000331720 Q14CZ0-CP072_HUMAN for C16orf72 Gene via STRING UniProtKB

Gene Ontology (GO) - Biological Process for C16orf72 Gene


No data available for Pathways by source for C16orf72 Gene

Transcripts for C16orf72 Gene

mRNA/cDNA for C16orf72 Gene

Unigene Clusters for C16orf72 Gene

Chromosome 16 open reading frame 72:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C16orf72

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C16orf72 Gene

No ASD Table

Relevant External Links for C16orf72 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C16orf72 Gene

mRNA expression in normal human tissues for C16orf72 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for C16orf72 Gene

This gene is overexpressed in Whole Blood (4.4).

SOURCE GeneReport for Unigene cluster for C16orf72 Gene Hs.221497

genes like me logo Genes that share expressions with C16orf72: view

Primer Products

In Situ Assay Products

No data available for Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for C16orf72 Gene

Orthologs for C16orf72 Gene

This gene was present in the common ancestor of animals.

Orthologs for C16orf72 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia C25H16orf72 35
  • 97.7 (n)
  • 100 (a)
C25H16ORF72 36
  • 100 (a)
(Mus musculus)
Mammalia 1810013L24Rik 35
  • 97.09 (n)
  • 98.55 (a)
1810013L24Rik 16
1810013L24Rik 36
  • 99 (a)
(Pan troglodytes)
Mammalia C16H16orf72 35
  • 99.24 (n)
  • 98.46 (a)
C16orf72 36
  • 99 (a)
(Rattus norvegicus)
Mammalia RGD1309748 35
  • 96.24 (n)
  • 98.55 (a)
(Canis familiaris)
Mammalia C16orf72 36
  • 83 (a)
(Monodelphis domestica)
Mammalia C16orf72 36
  • 97 (a)
(Ornithorhynchus anatinus)
Mammalia C16orf72 36
  • 95 (a)
(Gallus gallus)
Aves LOC416639 35
  • 88.03 (n)
  • 91.12 (a)
C16orf72 36
  • 94 (a)
(Anolis carolinensis)
Reptilia C16orf72 36
  • 82 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia c16orf72 35
  • 84.38 (n)
  • 92.91 (a)
Str.5950 35
African clawed frog
(Xenopus laevis)
Amphibia MGC68553 35
(Danio rerio)
Actinopterygii wufb59e09 35
zgc:77849 35
  • 75.63 (n)
  • 86.56 (a)
C3H16orf72 36
  • 83 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.3294 35
fruit fly
(Drosophila melanogaster)
Insecta CG4768 36
  • 32 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.11201 36
  • 44 (a)
Species with no ortholog for C16orf72:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C16orf72 Gene

Gene Tree for C16orf72 (if available)
Gene Tree for C16orf72 (if available)

Paralogs for C16orf72 Gene Pseudogenes for C16orf72 Gene

genes like me logo Genes that share paralogs with C16orf72: view

No data available for Paralogs for C16orf72 Gene

Variants for C16orf72 Gene

Sequence variations from dbSNP and Humsavar for C16orf72 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type MAF
rs6777 -- 9,119,562(+) TGTTT(A/C)ATATT utr-variant-3-prime
rs9039 -- 9,111,506(-) TACAC(A/G)GAAAA intron-variant
rs11450 -- 9,111,505(-) ACACA(A/G)AAAAT intron-variant
rs13543 -- 9,118,166(+) TTTTT(A/T)GATGA utr-variant-3-prime
rs1048687 -- 9,119,130(+) GAATT(C/T)GTCAC utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for C16orf72 Gene

Variant ID Type Subtype PubMed ID
dgv2600n71 CNV Gain 21882294
nsv457400 CNV Gain 19166990
nsv525864 CNV Loss 19592680
nsv457401 CNV Gain 19166990
nsv519065 CNV Gain 19592680
nsv457402 CNV Gain 19166990

Relevant External Links for C16orf72 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C16orf72 Gene

Disorders for C16orf72 Gene

(2) University of Copenhagen DISEASES for C16orf72 Gene

Relevant External Links for C16orf72

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator
genes like me logo Genes that share disorders with C16orf72: view

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , Novoseek inferred disease relationships and Genatlas for C16orf72 Gene

Publications for C16orf72 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. Ubiquitin-mediated proteolysis of HuR by heat shock. (PMID: 19322201) Abdelmohsen K. … Gorospe M. (EMBO J. 2009) 3
  5. A genome-wide association study of behavioral disinhibition. (PMID: 23942779) McGue M. … Iacono W.G. (Behav. Genet. 2013) 3

Products for C16orf72 Gene

Sources for C16orf72 Gene

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