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Aliases for C15orf62 Gene

Aliases for C15orf62 Gene

  • Chromosome 15 Open Reading Frame 62 2 3

External Ids for C15orf62 Gene

Previous GeneCards Identifiers for C15orf62 Gene

  • GC15P038853
  • GC15P041062
  • GC15P017910

Summaries for C15orf62 Gene

GeneCards Summary for C15orf62 Gene

C15orf62 (Chromosome 15 Open Reading Frame 62) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C15orf62 Gene

Genomics for C15orf62 Gene

Regulatory Elements for C15orf62 Gene

Genomic Location for C15orf62 Gene

Start:
40,769,961 bp from pter
End:
40,772,449 bp from pter
Size:
2,489 bases
Orientation:
Plus strand

Genomic View for C15orf62 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C15orf62 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C15orf62 Gene

Proteins for C15orf62 Gene

  • Protein details for C15orf62 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8K5M9-CO062_HUMAN
    Recommended name:
    Uncharacterized protein C15orf62, mitochondrial
    Protein Accession:
    A8K5M9
    Secondary Accessions:
    • A6NK01

    Protein attributes for C15orf62 Gene

    Size:
    175 amino acids
    Molecular mass:
    19679 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C15orf62 Gene

Proteomics data for C15orf62 Gene at MOPED

Post-translational modifications for C15orf62 Gene

No Post-translational modifications

Other Protein References for C15orf62 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C15orf62 Gene

Domains for C15orf62 Gene

Protein Domains for C15orf62 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C15orf62: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C15orf62 Gene

Function for C15orf62 Gene

Gene Ontology (GO) - Molecular Function for C15orf62 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0017049 GTP-Rho binding IBA --
genes like me logo Genes that share ontologies with C15orf62: view

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C15orf62

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C15orf62 Gene

Localization for C15orf62 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C15orf62 Gene

Mitochondrion.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C15orf62 Gene COMPARTMENTS Subcellular localization image for C15orf62 gene
Compartment Confidence
mitochondrion 3
nucleus 2
cytosol 1

Gene Ontology (GO) - Cellular Components for C15orf62 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IBA --
GO:0005739 mitochondrion IEA --
GO:0005856 cytoskeleton IBA --
GO:0005886 plasma membrane IBA --
genes like me logo Genes that share ontologies with C15orf62: view

Pathways for C15orf62 Gene

SuperPathways for C15orf62 Gene

No Data Available

Interacting Proteins for C15orf62 Gene

Gene Ontology (GO) - Biological Process for C15orf62 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007266 Rho protein signal transduction IBA --
GO:0008360 regulation of cell shape IBA --
GO:0030838 positive regulation of actin filament polymerization IBA --
GO:0031274 positive regulation of pseudopodium assembly IBA --
genes like me logo Genes that share ontologies with C15orf62: view

No data available for Pathways by source for C15orf62 Gene

Transcripts for C15orf62 Gene

mRNA/cDNA for C15orf62 Gene

(2) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C15orf62 Gene

Chromosome 15 open reading frame 62:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C15orf62

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C15orf62 Gene

No ASD Table

Relevant External Links for C15orf62 Gene

GeneLoc Exon Structure for
C15orf62
ECgene alternative splicing isoforms for
C15orf62

Expression for C15orf62 Gene

mRNA expression in normal human tissues for C15orf62 Gene

mRNA expression in normal human tissues for C15orf62 Gene

Protein differential expression in normal tissues for C15orf62 Gene

This gene is overexpressed in Plasma (47.4) and Heart (21.6).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C15orf62 Gene

SOURCE GeneReport for Unigene cluster for C15orf62 Gene Hs.631715

genes like me logo Genes that share expressions with C15orf62: view

Expression partners for C15orf62 Gene

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for C15orf62 Gene

Orthologs for C15orf62 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C15orf62 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia C10H15orf62 35
  • 86.27 (n)
  • 88.24 (a)
C15orf62 36
  • 85 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C30H15orf62 35
  • 88.95 (n)
  • 89.14 (a)
C15orf62 36
  • 89 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm14137 35
  • 85.33 (n)
  • 86.29 (a)
Gm14137 16
Gm14137 36
  • 83 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia C15H15orf62 35
  • 99.62 (n)
  • 100 (a)
rat
(Rattus norvegicus)
Mammalia LOC691418 35
  • 84.95 (n)
  • 86.29 (a)
oppossum
(Monodelphis domestica)
Mammalia C15orf62 36
  • 80 (a)
OneToOne
chicken
(Gallus gallus)
Aves C5H15ORF62 35
  • 54.17 (n)
  • 45 (a)
C15orf62 36
  • 38 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C15orf62 36
  • 33 (a)
OneToOne
Species with no ortholog for C15orf62:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C15orf62 Gene

ENSEMBL:
Gene Tree for C15orf62 (if available)
TreeFam:
Gene Tree for C15orf62 (if available)

Paralogs for C15orf62 Gene

No data available for Paralogs for C15orf62 Gene

Variants for C15orf62 Gene

Structural Variations from Database of Genomic Variants (DGV) for C15orf62 Gene

Variant ID Type Subtype PubMed ID
nsv904101 CNV Loss 21882294
nsv904102 CNV Loss 21882294
nsv827306 CNV Loss 20364138

Relevant External Links for C15orf62 Gene

HapMap Linkage Disequilibrium report
C15orf62

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for C15orf62 Gene

Disorders for C15orf62 Gene

Relevant External Links for C15orf62

Genetic Association Database (GAD)
C15orf62
Human Genome Epidemiology (HuGE) Navigator
C15orf62

No disorders were found for C15orf62 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for C15orf62 Gene

Publications for C15orf62 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody M.C. … Nusbaum C. (Nature 2006) 3 4
  3. Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. (PMID: 20628086) Bailey S.D. … Anand S. (Diabetes Care 2010) 3 48
  4. Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip. (PMID: 19913121) Talmud P.J. … . (Am. J. Hum. Genet. 2009) 3
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for C15orf62 Gene

Sources for C15orf62 Gene

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