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Aliases for C15orf59-AS1 Gene

Subcategory (RNA class) for C15orf59-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for C15orf59-AS1 Gene

  • C15orf59 Antisense RNA 1 2 3 5
  • TCONS_00023459 3

External Ids for C15orf59-AS1 Gene

Summaries for C15orf59-AS1 Gene

GeneCards Summary for C15orf59-AS1 Gene

C15orf59-AS1 (C15orf59 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C15orf59-AS1 Gene

Genomics for C15orf59-AS1 Gene

Regulatory Elements for C15orf59-AS1 Gene

Enhancers for C15orf59-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G073763 0.5 ENCODE 4.6 +12.1 12086 0.9 FOS SMAD4 PPARG C15orf59-AS1 C15orf59 LOC105370892
GH15G073767 0.4 ENCODE 4.4 +15.6 15628 0.2 RFX1 ZBTB33 C15orf59-AS1 C15orf59 LOC105370892
GH15G073742 0.8 ENCODE 0.4 -9.2 -9180 1.0 HDGF ATF1 ZBTB21 NFIB THRB ZIC2 ZBTB7B CTBP1 GATA3 ZNF600 C15orf59-AS1 ENSG00000276807
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C15orf59-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for C15orf59-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000079139 683 801 ZSCAN26 SUZ12 ZNF76 KLF17 RBBP5 ZIC2 ZNF121 ZFHX2 GLIS2 ZBTB48

Genomic Location for C15orf59-AS1 Gene

Chromosome:
15
Start:
73,752,317 bp from pter
End:
73,770,613 bp from pter
Size:
18,297 bases
Orientation:
Plus strand

Genomic View for C15orf59-AS1 Gene

Genes around C15orf59-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C15orf59-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C15orf59-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C15orf59-AS1 Gene

Proteins for C15orf59-AS1 Gene

Post-translational modifications for C15orf59-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C15orf59-AS1 Gene

Domains & Families for C15orf59-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C15orf59-AS1 Gene

Function for C15orf59-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C15orf59-AS1 Gene

Localization for C15orf59-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for C15orf59-AS1 Gene

Pathways & Interactions for C15orf59-AS1 Gene

SuperPathways for C15orf59-AS1 Gene

No Data Available

Interacting Proteins for C15orf59-AS1 Gene

Gene Ontology (GO) - Biological Process for C15orf59-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C15orf59-AS1 Gene

Drugs & Compounds for C15orf59-AS1 Gene

No Compound Related Data Available

Transcripts for C15orf59-AS1 Gene

mRNA/cDNA for C15orf59-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for C15orf59-AS1 Gene

No ASD Table

Relevant External Links for C15orf59-AS1 Gene

GeneLoc Exon Structure for
C15orf59-AS1
ECgene alternative splicing isoforms for
C15orf59-AS1

Expression for C15orf59-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C15orf59-AS1 Gene

genes like me logo Genes that share expression patterns with C15orf59-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C15orf59-AS1 Gene

Orthologs for C15orf59-AS1 Gene

Evolution for C15orf59-AS1 Gene

ENSEMBL:
Gene Tree for C15orf59-AS1 (if available)
TreeFam:
Gene Tree for C15orf59-AS1 (if available)

No data available for Orthologs for C15orf59-AS1 Gene

Paralogs for C15orf59-AS1 Gene

No data available for Paralogs for C15orf59-AS1 Gene

Variants for C15orf59-AS1 Gene

Sequence variations from dbSNP and Humsavar for C15orf59-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1001192506 -- 73,767,721(+) CCCTG(A/T)ATCTC upstream-variant-2KB
rs1001443636 -- 73,766,639(+) CAGTG(A/G)TTCTG upstream-variant-2KB
rs1002616440 -- 73,766,219(+) CAGCT(A/G)CTCTT upstream-variant-2KB
rs1003037916 -- 73,768,950(+) GGCGG(G/T)CATGG intron-variant
rs1003050948 -- 73,769,374(+) TTTTT(C/T)TTTTT intron-variant

Relevant External Links for C15orf59-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C15orf59-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C15orf59-AS1 Gene

Disorders for C15orf59-AS1 Gene

Relevant External Links for C15orf59-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C15orf59-AS1

No disorders were found for C15orf59-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C15orf59-AS1 Gene

Publications for C15orf59-AS1 Gene

No publications were found for C15orf59-AS1 Gene.

Products for C15orf59-AS1 Gene

Sources for C15orf59-AS1 Gene

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