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Aliases for C15orf32 Gene

Aliases for C15orf32 Gene

  • Chromosome 15 Open Reading Frame 32 2 3 5

External Ids for C15orf32 Gene

Previous GeneCards Identifiers for C15orf32 Gene

  • GC15P090816
  • GC15P093014
  • GC15P069151

Summaries for C15orf32 Gene

GeneCards Summary for C15orf32 Gene

C15orf32 (Chromosome 15 Open Reading Frame 32) is a Protein Coding gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C15orf32 Gene

Genomics for C15orf32 Gene

Regulatory Elements for C15orf32 Gene

Enhancers for C15orf32 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G092491 0.8 ENCODE 11.4 +21.0 20981 1.3 HDAC1 ATF1 CBX3 SIN3A ZNF2 ZBTB40 RAD21 ZNF143 CREM ZNF263 C15orf32 PIRC77
GH15G092448 0.5 ENCODE 11.7 -21.3 -21312 3.6 PAF1 GATA3 FOS C15orf32 ENSG00000239197 ST8SIA2 GC15P092447 LOC104613533
GH15G092494 0.4 ENCODE 11.3 +23.9 23903 1.4 ZIC2 C15orf32 PIRC77
GH15G092540 0.4 ENCODE 11.2 +70.1 70139 1.9 ZNF121 C15orf32 ST8SIA2 PIRC77
GH15G092876 2 FANTOM5 Ensembl ENCODE dbSUPER 2.1 +411.3 411257 12.3 HDGF PKNOX1 FOXA2 CREB3L1 ARNT WRNIP1 ARID4B SIN3A DMAP1 YY1 FAM174B CHD2 C15orf32 ENSG00000279765 LINC01578
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C15orf32 on UCSC Golden Path with GeneCards custom track

Genomic Location for C15orf32 Gene

Chromosome:
15
Start:
92,471,654 bp from pter
End:
92,501,117 bp from pter
Size:
29,464 bases
Orientation:
Plus strand

Genomic View for C15orf32 Gene

Genes around C15orf32 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C15orf32 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C15orf32 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C15orf32 Gene

Proteins for C15orf32 Gene

  • Protein details for C15orf32 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q32M92-CO032_HUMAN
    Recommended name:
    Uncharacterized protein C15orf32
    Protein Accession:
    Q32M92
    Secondary Accessions:
    • C5HTZ8
    • Q96M45

    Protein attributes for C15orf32 Gene

    Size:
    178 amino acids
    Molecular mass:
    20262 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C15orf32 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C15orf32 Gene

Post-translational modifications for C15orf32 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C15orf32 Gene

No data available for DME Specific Peptides for C15orf32 Gene

Domains & Families for C15orf32 Gene

Protein Domains for C15orf32 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C15orf32: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C15orf32 Gene

Function for C15orf32 Gene

Animal Model Products

CRISPR Products

miRNA for C15orf32 Gene

miRTarBase miRNAs that target C15orf32

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for C15orf32 Gene

Localization for C15orf32 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for C15orf32 gene
Compartment Confidence
plasma membrane 1
peroxisome 1
nucleus 1
cytosol 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C15orf32 Gene

Pathways & Interactions for C15orf32 Gene

SuperPathways for C15orf32 Gene

No Data Available

Interacting Proteins for C15orf32 Gene

Gene Ontology (GO) - Biological Process for C15orf32 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C15orf32 Gene

Drugs & Compounds for C15orf32 Gene

No Compound Related Data Available

Transcripts for C15orf32 Gene

mRNA/cDNA for C15orf32 Gene

Unigene Clusters for C15orf32 Gene

Chromosome 15 open reading frame 32:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for C15orf32 Gene

ExUns: 1a · 1b ^ 2a · 2b ^ 3a · 3b
SP1: -
SP2:

Relevant External Links for C15orf32 Gene

GeneLoc Exon Structure for
C15orf32
ECgene alternative splicing isoforms for
C15orf32

Expression for C15orf32 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C15orf32 Gene

mRNA differential expression in normal tissues according to GTEx for C15orf32 Gene

This gene is overexpressed in Testis (x47.3).

NURSA nuclear receptor signaling pathways regulating expression of C15orf32 Gene:

C15orf32

SOURCE GeneReport for Unigene cluster for C15orf32 Gene:

Hs.367879
genes like me logo Genes that share expression patterns with C15orf32: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C15orf32 Gene

Orthologs for C15orf32 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C15orf32 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C15H15orf32 34
  • 99.63 (n)
C15orf32 35
  • 99 (a)
OneToOne
Species where no ortholog for C15orf32 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C15orf32 Gene

ENSEMBL:
Gene Tree for C15orf32 (if available)
TreeFam:
Gene Tree for C15orf32 (if available)

Paralogs for C15orf32 Gene

No data available for Paralogs for C15orf32 Gene

Variants for C15orf32 Gene

Sequence variations from dbSNP and Humsavar for C15orf32 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000012850 -- 92,465,905(+) TAGTC(A/C/G)TATTC utr-variant-3-prime, utr-variant-5-prime
rs1000079101 -- 92,471,081(+) ACTAA(A/T)TTATC intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1000080307 -- 92,498,009(+) CATTA(G/T)GTGTA intron-variant
rs1000096089 -- 92,478,943(+) TCCCC(A/G)GAGTC intron-variant
rs1000131502 -- 92,471,366(+) TGGGG(G/T)GCTGG nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for C15orf32 Gene

Variant ID Type Subtype PubMed ID
dgv460e214 CNV loss 21293372
nsv1037972 CNV loss 25217958
nsv1049561 CNV loss 25217958
nsv519402 CNV gain 19592680

Variation tolerance for C15orf32 Gene

Residual Variation Intolerance Score: 81.7% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.66; 56.92% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C15orf32 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C15orf32

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C15orf32 Gene

Disorders for C15orf32 Gene

Relevant External Links for C15orf32

Genetic Association Database (GAD)
C15orf32
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C15orf32

No disorders were found for C15orf32 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C15orf32 Gene

Publications for C15orf32 Gene

  1. Genome-wide association study of bipolar I disorder in the Han Chinese population. (PMID: 20386566) Lee M.T. … Cheng A.T. (Mol. Psychiatry 2011) 3 46 64
  2. A quantitative-trait genome-wide association study of alcoholism risk in the community: findings and implications. (PMID: 21529783) Heath A.C. … Montgomery G.W. (Biol. Psychiatry 2011) 3 46 64
  3. Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk J.B. … O'Connor G.T. (BMC Med. Genet. 2007) 3 46 64
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64

Products for C15orf32 Gene

Sources for C15orf32 Gene

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