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Aliases for C14orf93 Gene

Aliases for C14orf93 Gene

  • Chromosome 14 Open Reading Frame 93 2 3
  • EC 2.4.2.18 64
  • EC 2.4.2.21 64

External Ids for C14orf93 Gene

Summaries for C14orf93 Gene

GeneCards Summary for C14orf93 Gene

C14orf93 (Chromosome 14 Open Reading Frame 93) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C14orf93 Gene

Genomics for C14orf93 Gene

Genomic Location for C14orf93 Gene

Start:
22,985,908 bp from pter
End:
23,010,201 bp from pter
Size:
24,294 bases
Orientation:
Minus strand

Genomic View for C14orf93 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C14orf93 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C14orf93 Gene

Regulatory Elements for C14orf93 Gene

Proteins for C14orf93 Gene

  • Protein details for C14orf93 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H972-CN093_HUMAN
    Recommended name:
    Uncharacterized protein C14orf93
    Protein Accession:
    Q9H972
    Secondary Accessions:
    • B7WP03
    • D3DS38
    • D3DS39
    • Q86SE6
    • Q96CF7
    • Q9HA68

    Protein attributes for C14orf93 Gene

    Size:
    538 amino acids
    Molecular mass:
    58697 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C14orf93 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C14orf93 Gene

Proteomics data for C14orf93 Gene at MOPED

Selected DME Specific Peptides for C14orf93 Gene

Post-translational modifications for C14orf93 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys71

Domains for C14orf93 Gene

Protein Domains for C14orf93 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with C14orf93: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C14orf93 Gene

Function for C14orf93 Gene

Enzyme Numbers (IUBMB) for C14orf93 Gene

Gene Ontology (GO) - Molecular Function for C14orf93 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
GO:0044822 poly(A) RNA binding IDA 22658674
genes like me logo Genes that share ontologies with C14orf93: view

Phenotypes for C14orf93 Gene

GenomeRNAi human phenotypes for C14orf93:
genes like me logo Genes that share phenotypes with C14orf93: view

miRNA for C14orf93 Gene

miRTarBase miRNAs that target C14orf93

No data available for Molecular function , Animal Models , Transcription Factor Targeting and HOMER Transcription for C14orf93 Gene

Localization for C14orf93 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C14orf93 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C14orf93 Gene COMPARTMENTS Subcellular localization image for C14orf93 gene
Compartment Confidence
extracellular 3
cytosol 2
nucleus 2
plasma membrane 1

Gene Ontology (GO) - Cellular Components for C14orf93 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with C14orf93: view

Pathways for C14orf93 Gene

SuperPathways for C14orf93 Gene

No Data Available

Interacting Proteins for C14orf93 Gene

STRING Interaction Network Preview (showing 3 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000299088%0d%0a9606.ENSP00000318352%0d%0a9606.ENSP00000405965%0d%0a9606.ENSP00000344818%0d%0a
Selected Interacting proteins: ENSP00000299088 Q9H972-CN093_HUMAN for C14orf93 Gene via STRING UniProtKB

Gene Ontology (GO) - Biological Process for C14orf93 Gene

None

No data available for Pathways by source for C14orf93 Gene

Transcripts for C14orf93 Gene

Unigene Clusters for C14orf93 Gene

Chromosome 14 open reading frame 93:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C14orf93 Gene

ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7a · 7b · 7c · 7d · 7e · 7f · 7g · 7h · 7i ^ 8a · 8b · 8c · 8d ^ 9a · 9b · 9c ^
SP1:
SP2: - - - - - - -
SP3: - - - - - - - - -
SP4: - - - - - - - - - - - - -
SP5: - - - - - -
SP6: - - - - - - - - - - - - -
SP7: - - - -
SP8: - - - - -
SP9: - - - - - - - - - - -
SP10: - - - - - -
SP11: - - - -
SP12: - - - - - - - -
SP13: - - - - - - - -
SP14: - - - - - - - -
SP15: - - - - - - - - -
SP16: - - - - - - - -

ExUns: 10 ^ 11 ^ 12 ^ 13 ^ 14
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:
SP9:
SP10:
SP11:
SP12:
SP13:
SP14:
SP15:
SP16:

Relevant External Links for C14orf93 Gene

GeneLoc Exon Structure for
C14orf93
ECgene alternative splicing isoforms for
C14orf93

Expression for C14orf93 Gene

mRNA expression in normal human tissues for C14orf93 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for C14orf93 Gene

SOURCE GeneReport for Unigene cluster for C14orf93 Gene Hs.255874

genes like me logo Genes that share expressions with C14orf93: view

Orthologs for C14orf93 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C14orf93 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C14orf93 37
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C10H14orf93 36
  • 88.97 (n)
  • 91.45 (a)
C10H14ORF93 37
  • 91 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C14orf93 37
  • 92 (a)
OneToOne
C8H14orf93 36
  • 90.89 (n)
  • 92.57 (a)
mouse
(Mus musculus)
Mammalia 4931414P19Rik 36
  • 84.95 (n)
  • 87.69 (a)
4931414P19Rik 16
4931414P19Rik 37
  • 87 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C14orf93 37
  • 87 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C14orf93 37
  • 82 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1565222 36
  • 85.14 (n)
  • 88.06 (a)
lizard
(Anolis carolinensis)
Reptilia C14orf93 37
  • 65 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.3310 36
tropical clawed frog
(Silurana tropicalis)
Amphibia c14orf93 36
  • 59.29 (n)
  • 60.08 (a)
Str.14071 36
Species with no ortholog for C14orf93:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C14orf93 Gene

ENSEMBL:
Gene Tree for C14orf93 (if available)
TreeFam:
Gene Tree for C14orf93 (if available)

Paralogs for C14orf93 Gene

No data available for Paralogs for C14orf93 Gene

Variants for C14orf93 Gene

Sequence variations from dbSNP and Humsavar for C14orf93 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
rs997154 -- 22,995,273(+) CCAAG(A/G)TGCCC intron-variant
rs1043675 -- 22,987,106(-) AAAGC(A/G)AATTT utr-variant-3-prime
rs1318009 -- 22,993,802(+) TTTTG(C/G)TTCAC intron-variant
rs1885099 -- 22,994,607(+) cctgt(A/T)atccc intron-variant
rs2331896 -- 23,003,226(+) TTAAT(C/T)TGCCT intron-variant

Relevant External Links for C14orf93 Gene

HapMap Linkage Disequilibrium report
C14orf93

No data available for Structural Variations from Database of Genomic Variants (DGV) for C14orf93 Gene

Disorders for C14orf93 Gene

No disorders were found for C14orf93 Gene.

No data available for UniProtKB/Swiss-Prot for C14orf93 Gene

Publications for C14orf93 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation. (PMID: 15146197) Brandenberger R. … Stanton L.W. (Nat. Biotechnol. 2004) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for C14orf93 Gene

Sources for C14orf93 Gene

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