C14orf64 Gene
protein-coding GIFtS: 26
GCID: GC14M098391
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chromosome 14 open reading frame 64
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Aliases
for C14orf64 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
This gene clusters with an RNA gene
Subcategory (RNA class): lncRNA
Quality score for the ORGUL clustered with this gene is 8
| Aliases |
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| Chromosome 14 Open Reading Frame 641 2 |
| External Ids: | HGNC: 201111 | Entrez Gene: 3880112 | Ensembl: ENSG000002462237 | UniProtKB: H0YJ134 | UniProtKB: H0YJ234 |
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| UniProtKB: H0YJ284 | UniProtKB: H0YJB04 | UniProtKB: H0YJM94 | UniProtKB: H0YJQ24 |
Export aliases for C14orf64 gene to outside databasesPrevious GC identifers: GC14U900157 GC14M078575
Summaries
for C14orf64 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
-- |
Genomic Views
for C14orf64 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000014.8 NC_018925.1 NT_026437.12
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the C14orf64 gene promoter:
STAT1 STAT1beta STAT1alpha E47 HNF-1A STAT2 HNF-1 STAT3 Sox9 Hand1
Other transcription factors
Search SABiosciences Chromatin IP Primers for C14orf64
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat C14orf64 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 14q32.2 Ensembl cytogenetic band: 14q32.2 HGNC cytogenetic band: 14q32.2C14orf64 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 14 GeneLoc Exon Structure GeneLoc location for GC14M098391: view genomic region
(about GC identifiers)
Start:
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98,391,947 bp from pter |
End:
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98,444,461 bp from pter |
Size:
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52,515 bases |
Orientation:
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minus strand |
ORGUL member locations:
Legend (see complete legend)
- n374042
- n344766
- n374346
- n374074
- n374463
- n374075
- n379644
- n379975
- n374347
- n374348
- n374349
- n374464
- n374350
- n374351
- n374466
98391946 98700309 99008671 chr14
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Proteins
for C14orf64 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/TrEMBL: H0YJ13 (See
protein sequence)Recommended Name: Protein C14orf64 Size: 89 amino acids; 9709 Da
Caution: The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered aspreliminary dataUniProtKB/TrEMBL: H0YJ23 (See
protein sequence) Recommended Name: Protein C14orf64 Size: 137 amino acids; 14984 Da
Caution: The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered aspreliminary dataUniProtKB/TrEMBL: H0YJ28 (See
protein sequence) Recommended Name: Protein C14orf64 Size: 132 amino acids; 14433 Da
Caution: The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered aspreliminary dataUniProtKB/TrEMBL: H0YJB0 (See
protein sequence) Recommended Name: Protein C14orf64 Size: 111 amino acids; 12343 Da
Caution: The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered aspreliminary dataUniProtKB/TrEMBL: H0YJM9 (See
protein sequence) Recommended Name: Protein C14orf64 Size: 133 amino acids; 14570 Da
Caution: The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered aspreliminary dataUniProtKB/TrEMBL: H0YJQ2 (See
protein sequence) Recommended Name: Protein C14orf64 Size: 118 amino acids; 13190 Da
Caution: The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered aspreliminary dataC14orf64 Protein expression data from MOPED and PaxDb: --
ENSEMBL proteins: ENSP00000450685 ENSP00000450631 ENSP00000451817 ENSP00000450702 ENSP00000451120 ENSP00000451954
Human Recombinant Protein Products:
C14orf64 Antibody Products:
Assay Products for C14orf64: |
Protein
Domains /
Families
for C14orf64 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| ProtoNet protein and cluster: H0YJ13 |
Function
for C14orf64 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for C14orf64 |
|
Pathways & Interactions
for C14orf64 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for C14orf64
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Drugs & Compounds
for C14orf64 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for C14orf64
Search CenterWatch for drugs/clinical trials and news about C14orf64 
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Transcripts
for C14orf64 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
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Unigene Cluster for C14orf64: Chromosome 14 open reading frame 64 Hs.651477 [show with all ESTs]Unigene Representative Sequence: AK0916686 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000499006(uc001yfw.2) ENST00000556462(uc001yfx.2) ENST00000502187(uc001yfy.2 uc010avq.2)
ENST00000512901 ENST00000554822 ENST00000556138
Additional cDNA sequence: AK091668.1 AK097943.1 BC043585.1 BX647564.1 JX073283.1 NR_015430.1 6 DOTS entries: DT.101978367 DT.75100840 DT.100021056 DT.75165145 DT.427747 DT.91751809 23 AceView cDNA sequences: AA418739 AA356385 BI772351 AK097943 AI424963 AA486557 BX109572 AI246285 AK091668 BC043585 BV205945 AA418794 AA486654 BX647564 AW137548 BI834723 AI275518 AW054808 AV707761 AI140993 AW243292 CD686762 AI766277
GeneLoc Exon Structure
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Expression
for C14orf64 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| C14orf64 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: --
About this image
Genevestigator expression for C14orf64
SOURCE GeneReport for Unigene cluster: Hs.651477
SABiosciences Custom PCR Arrays for C14orf64
Primer
Products: |  | Browse OriGene genome-wide validated SYBR primer pairs
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat C14orf64 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat C14orf64 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat C14orf64 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for C14orf64 |
Orthologs
for C14orf64 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
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ENSEMBL Gene Tree for C14orf64 (if available)
TreeFam Gene Tree for C14orf64 (if available) |
Paralogs
for C14orf64 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| -- |
Genomic Variants
for C14orf64 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 14 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
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HapMap Linkage Disequilibrium report for C14orf64 (98391947 - 98444461 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 1 variation for C14orf64
1 CNV: 4846 | SABiosciences Cancer Mutation PCR Assays |
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Disorders
/ Diseases
for C14orf64 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
| -- |
Publications
for C14orf64 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for C14orf64 gene integrated from 9 sources:
(articles sorted by number of sources associating them with C14orf64) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1 Ota T.... Sugano S. (2004)
- Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932)1 Strausberg R.L....Marra M.A. (2002)
|
External Searches for C14orf64 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing C14orf64 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing C14orf64 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing C14orf64 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for C14orf64 | Pharmacogenomics, SNPs, Pathways |
|
| | |
About This Section
| Patent Information for C14orf64 gene:
Search GeneIP for patents involving C14orf64
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for C14orf64 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
About This Section
|
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|  | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat C14orf64 | | | Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing C14orf64 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat C14orf64 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat C14orf64 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat C14orf64 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat C14orf64 |
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 | | | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for C14orf64 |
|  |  |  | | | | Search ThermoFisher Antibodies for C14orf64 |
| | | Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat C14orf64 |
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GeneCards Homepage -
Last full update: 19 Mar 2013 -
Incrementals: 21 Mar 2013 , 15 Apr 2013 , 27 Apr 2013
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