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Aliases for C14orf178 Gene

Aliases for C14orf178 Gene

  • Chromosome 14 Open Reading Frame 178 2 3

External Ids for C14orf178 Gene

Previous GeneCards Identifiers for C14orf178 Gene

  • GC14P077297
  • GC14P078226
  • GC14P058393

Summaries for C14orf178 Gene

GeneCards Summary for C14orf178 Gene

C14orf178 (Chromosome 14 Open Reading Frame 178) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C14orf178 Gene

Genomics for C14orf178 Gene

Regulatory Elements for C14orf178 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for C14orf178 Gene

Start:
77,760,830 bp from pter
End:
77,769,742 bp from pter
Size:
8,913 bases
Orientation:
Plus strand

Genomic View for C14orf178 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C14orf178 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C14orf178 Gene

Proteins for C14orf178 Gene

  • Protein details for C14orf178 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N769-CN178_HUMAN
    Recommended name:
    Uncharacterized protein C14orf178
    Protein Accession:
    Q8N769
    Secondary Accessions:
    • Q2HIX2
    • Q3KNR7

    Protein attributes for C14orf178 Gene

    Size:
    122 amino acids
    Molecular mass:
    13377 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C14orf178 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C14orf178 Gene

Proteomics data for C14orf178 Gene at MOPED

Post-translational modifications for C14orf178 Gene

No Post-translational modifications

Other Protein References for C14orf178 Gene

No data available for DME Specific Peptides for C14orf178 Gene

Domains for C14orf178 Gene

Protein Domains for C14orf178 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C14orf178: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C14orf178 Gene

Function for C14orf178 Gene

Animal Model Products

CRISPR Products

miRNA for C14orf178 Gene

miRTarBase miRNAs that target C14orf178

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for C14orf178 Gene

Localization for C14orf178 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C14orf178 Gene COMPARTMENTS Subcellular localization image for C14orf178 gene
Compartment Confidence
extracellular 2
nucleus 2
cytosol 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C14orf178 Gene

Pathways for C14orf178 Gene

SuperPathways for C14orf178 Gene

No Data Available

Interacting Proteins for C14orf178 Gene

Gene Ontology (GO) - Biological Process for C14orf178 Gene

None

No data available for Pathways by source for C14orf178 Gene

Transcripts for C14orf178 Gene

mRNA/cDNA for C14orf178 Gene

(2) REFSEQ mRNAs :
(2) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate C14orf178
    • Block miRNA regulation of C14orf178 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for C14orf178

    Primer Products

    • OriGene qSTAR qPCR primer pairs in human,mouse,rat for C14orf178
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for C14orf178 Gene

    No ASD Table

    Relevant External Links for C14orf178 Gene

    GeneLoc Exon Structure for
    C14orf178
    ECgene alternative splicing isoforms for
    C14orf178

    Expression for C14orf178 Gene

    mRNA expression in normal human tissues for C14orf178 Gene

    mRNA differential expression in normal tissues according to GTEx for C14orf178 Gene

    This gene is overexpressed in Testis (9.8).

    SOURCE GeneReport for Unigene cluster for C14orf178 Gene Hs.375834

    genes like me logo Genes that share expressions with C14orf178: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for C14orf178 Gene

    Orthologs for C14orf178 Gene

    This gene was present in the common ancestor of human and chimp.

    Orthologs for C14orf178 Gene

    Organism Taxonomy Gene Similarity Type Details
    chimpanzee
    (Pan troglodytes)
    Mammalia C14H14orf178 35
    • 97.81 (n)
    • 95.9 (a)
    C14orf178 36
    • 96 (a)
    OneToOne
    Species with no ortholog for C14orf178:
    • A. gosspyii yeast (Ashbya gossypii)
    • Actinobacteria (Mycobacterium tuberculosis)
    • African clawed frog (Xenopus laevis)
    • African malaria mosquito (Anopheles gambiae)
    • Alicante grape (Vitis vinifera)
    • alpha proteobacteria (Wolbachia pipientis)
    • amoeba (Dictyostelium discoideum)
    • Archea (Pyrococcus horikoshii)
    • baker's yeast (Saccharomyces cerevisiae)
    • barley (Hordeum vulgare)
    • beta proteobacteria (Neisseria meningitidis)
    • bread mold (Neurospora crassa)
    • chicken (Gallus gallus)
    • Chromalveolata (Phytophthora infestans)
    • common water flea (Daphnia pulex)
    • corn (Zea mays)
    • cow (Bos Taurus)
    • dog (Canis familiaris)
    • E. coli (Escherichia coli)
    • filamentous fungi (Aspergillus nidulans)
    • Firmicute bacteria (Streptococcus pneumoniae)
    • fission yeast (Schizosaccharomyces pombe)
    • fruit fly (Drosophila melanogaster)
    • green algae (Chlamydomonas reinhardtii)
    • honey bee (Apis mellifera)
    • K. lactis yeast (Kluyveromyces lactis)
    • lizard (Anolis carolinensis)
    • loblloly pine (Pinus taeda)
    • malaria parasite (Plasmodium falciparum)
    • medicago trunc (Medicago Truncatula)
    • moss (Physcomitrella patens)
    • mouse (Mus musculus)
    • oppossum (Monodelphis domestica)
    • orangutan (Pongo pygmaeus)
    • pig (Sus scrofa)
    • platypus (Ornithorhynchus anatinus)
    • rainbow trout (Oncorhynchus mykiss)
    • rat (Rattus norvegicus)
    • rice (Oryza sativa)
    • rice blast fungus (Magnaporthe grisea)
    • schistosome parasite (Schistosoma mansoni)
    • sea anemone (Nematostella vectensis)
    • sea squirt (Ciona intestinalis)
    • sea squirt (Ciona savignyi)
    • sea urchin (Strongylocentrotus purpuratus)
    • sorghum (Sorghum bicolor)
    • soybean (Glycine max)
    • stem rust fungus (Puccinia graminis)
    • sugarcane (Saccharum officinarum)
    • thale cress (Arabidopsis thaliana)
    • tomato (Lycopersicon esculentum)
    • toxoplasmosis (Toxoplasma gondii)
    • Trichoplax (Trichoplax adhaerens)
    • tropical clawed frog (Silurana tropicalis)
    • wheat (Triticum aestivum)
    • worm (Caenorhabditis elegans)
    • zebrafish (Danio rerio)

    Evolution for C14orf178 Gene

    ENSEMBL:
    Gene Tree for C14orf178 (if available)
    TreeFam:
    Gene Tree for C14orf178 (if available)

    Paralogs for C14orf178 Gene

    genes like me logo Genes that share paralogs with C14orf178: view

    No data available for Paralogs for C14orf178 Gene

    Variants for C14orf178 Gene

    Sequence variations from dbSNP and Humsavar for C14orf178 Gene

    SNP ID Clin Chr 14 pos Sequence Context AA Info Type MAF
    rs1978417 -- 77,768,441(+) ttttt(A/T)ttttt intron-variant
    rs3759728 -- 77,763,816(-) TTGTA(A/T)CACGT intron-variant
    rs6574399 -- 77,764,624(+) CCACC(A/T)CACCG intron-variant
    rs7142390 -- 77,766,537(+) ataga(C/T)tcata intron-variant
    rs7145717 -- 77,766,883(+) ataga(A/G)aaatt intron-variant

    Structural Variations from Database of Genomic Variants (DGV) for C14orf178 Gene

    Variant ID Type Subtype PubMed ID
    dgv643e1 CNV Complex 17122850

    Relevant External Links for C14orf178 Gene

    HapMap Linkage Disequilibrium report
    C14orf178

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C14orf178 Gene

    Disorders for C14orf178 Gene

    No disorders were found for C14orf178 Gene.

    No data available for UniProtKB/Swiss-Prot for C14orf178 Gene

    Publications for C14orf178 Gene

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
    2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
    3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
    4. The DNA sequence and analysis of human chromosome 14. (PMID: 12508121) Heilig R. … Weissenbach J. (Nature 2003) 4

    Products for C14orf178 Gene

    • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
    • QIAGEN qRT-PCR Assays for microRNAs that regulate C14orf178
      • QuantiTect SYBR Green Assays in human,mouse,rat
      • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
      • QuantiFast Probe-based Assays in human,mouse,rat
      • Predesigned siRNA for gene silencing in human,mouse,rat for C14orf178
      • Block miRNA regulation of C14orf178 using miScript Target Protectors

      Sources for C14orf178 Gene

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