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Aliases for C12orf66 Gene

Aliases for C12orf66 Gene

  • Chromosome 12 Open Reading Frame 66 2 3

External Ids for C12orf66 Gene

Previous GeneCards Identifiers for C12orf66 Gene

  • GC12M062867
  • GC12M064581
  • GC12M061638

Summaries for C12orf66 Gene

GeneCards Summary for C12orf66 Gene

C12orf66 (Chromosome 12 Open Reading Frame 66) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C12orf66 Gene

Genomics for C12orf66 Gene

Regulatory Elements for C12orf66 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for C12orf66 Gene

64,186,316 bp from pter
64,222,296 bp from pter
35,981 bases
Minus strand

Genomic View for C12orf66 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C12orf66 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C12orf66 Gene

Proteins for C12orf66 Gene

  • Protein details for C12orf66 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    UPF0536 protein C12orf66
    Protein Accession:
    Secondary Accessions:
    • C9JX54
    • Q8IYA0

    Protein attributes for C12orf66 Gene

    445 amino acids
    Molecular mass:
    50415 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C12orf66 Gene

Proteomics data for C12orf66 Gene at MOPED

Post-translational modifications for C12orf66 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C12orf66 Gene

No data available for DME Specific Peptides for C12orf66 Gene

Domains for C12orf66 Gene

Protein Domains for C12orf66 Gene


Suggested Antigen Peptide Sequences for C12orf66 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Q96MD2
  • Belongs to the UPF0536 family.
genes like me logo Genes that share domains with C12orf66: view

No data available for Gene Families for C12orf66 Gene

Function for C12orf66 Gene

Animal Model Products

CRISPR Products

miRNA for C12orf66 Gene

miRTarBase miRNAs that target C12orf66

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for C12orf66 Gene

Localization for C12orf66 Gene

Subcellular locations from

Jensen Localization Image for C12orf66 Gene COMPARTMENTS Subcellular localization image for C12orf66 gene
Compartment Confidence
cytosol 2
nucleus 2
peroxisome 2

Gene Ontology (GO) - Cellular Components for C12orf66 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0015630 microtubule cytoskeleton IDA --
GO:0045171 intercellular bridge IDA --
genes like me logo Genes that share ontologies with C12orf66: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for C12orf66 Gene

Pathways for C12orf66 Gene

SuperPathways for C12orf66 Gene

No Data Available

Interacting Proteins for C12orf66 Gene

Gene Ontology (GO) - Biological Process for C12orf66 Gene


No data available for Pathways by source for C12orf66 Gene

Transcripts for C12orf66 Gene

Unigene Clusters for C12orf66 Gene

Chromosome 12 open reading frame 66:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C12orf66

Primer Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C12orf66 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4a · 4b · 4c ^ 5
SP1: - - -
SP2: - -
SP3: -

Relevant External Links for C12orf66 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C12orf66 Gene

mRNA expression in normal human tissues for C12orf66 Gene

Protein differential expression in normal tissues for C12orf66 Gene

This gene is overexpressed in Liver, secretome (43.2), Peripheral blood mononuclear cells (15.1), and Adipocyte (7.2).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C12orf66 Gene

SOURCE GeneReport for Unigene cluster for C12orf66 Gene Hs.505871

genes like me logo Genes that share expressions with C12orf66: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Expression partners for C12orf66 Gene

Orthologs for C12orf66 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C12orf66 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia C5H12orf66 35
  • 92.96 (n)
  • 97.53 (a)
C5H12orf66 36
  • 97 (a)
(Canis familiaris)
Mammalia C10H12orf66 35
  • 92.88 (n)
  • 97.3 (a)
C12orf66 36
  • 97 (a)
(Mus musculus)
Mammalia BC048403 35
  • 89.21 (n)
  • 94.83 (a)
BC048403 16
BC048403 36
  • 94 (a)
(Pan troglodytes)
Mammalia C12H12orf66 35
  • 99.78 (n)
  • 99.33 (a)
C12orf66 36
  • 94 (a)
(Rattus norvegicus)
Mammalia RGD1565498 35
  • 89.51 (n)
  • 94.83 (a)
(Monodelphis domestica)
Mammalia C12orf66 36
  • 84 (a)
(Ornithorhynchus anatinus)
Mammalia C12orf66 36
  • 82 (a)
(Gallus gallus)
Aves C1H12ORF66 35
  • 83.3 (n)
  • 93.71 (a)
C12orf66 36
  • 93 (a)
(Anolis carolinensis)
Reptilia C12orf66 36
  • 88 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia c12orf66 35
  • 75.27 (n)
  • 84.02 (a)
African clawed frog
(Xenopus laevis)
Amphibia Xl.23915 35
(Danio rerio)
Actinopterygii si:ch211-125a15.1 35
  • 71.94 (n)
  • 77.29 (a)
C4H12orf66 36
  • 74 (a)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.10480 35
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 27 (a)
Species with no ortholog for C12orf66:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C12orf66 Gene

Gene Tree for C12orf66 (if available)
Gene Tree for C12orf66 (if available)

Paralogs for C12orf66 Gene

No data available for Paralogs for C12orf66 Gene

Variants for C12orf66 Gene

Sequence variations from dbSNP and Humsavar for C12orf66 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs699636 -- 64,189,693(-) actgt(C/T)tgtgg intron-variant
rs699637 -- 64,189,732(-) gccca(A/G)tgttt intron-variant
rs699638 - 64,193,853(+) TTTGG(A/C)TCCAG reference, missense
rs789721 -- 64,194,785(-) CTCCA(C/T)CTTTT intron-variant
rs789749 -- 64,192,441(-) CCTGG(C/T)AGAAG intron-variant, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for C12orf66 Gene

Variant ID Type Subtype PubMed ID
esv1536875 CNV Insertion 17803354

Relevant External Links for C12orf66 Gene

HapMap Linkage Disequilibrium report
Human Gene Mutation Database (HGMD)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C12orf66 Gene

Disorders for C12orf66 Gene

Relevant External Links for C12orf66

Genetic Association Database (GAD)

No disorders were found for C12orf66 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships and Genatlas for C12orf66 Gene

Publications for C12orf66 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. Discovery of genetic biomarkers contributing to variation in drug response of cytidine analogues using human lymphoblastoid cell lines. (PMID: 24483146) Li L. … Wang L. (BMC Genomics 2014) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. The finished DNA sequence of human chromosome 12. (PMID: 16541075) Scherer S.E. … Gibbs R.A. (Nature 2006) 4

Products for C12orf66 Gene

Sources for C12orf66 Gene

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