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Aliases for C11orf94 Gene

Aliases for C11orf94 Gene

  • Chromosome 11 Open Reading Frame 94 2 3 5

External Ids for C11orf94 Gene

Previous GeneCards Identifiers for C11orf94 Gene

  • GC11M045885
  • GC11M045928
  • GC11M045635
  • GC11M047069
  • GC11M047916
  • GC11M050773
  • GC11M051568
  • GC11M052230

Summaries for C11orf94 Gene

GeneCards Summary for C11orf94 Gene

C11orf94 (Chromosome 11 Open Reading Frame 94) is a Protein Coding gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C11orf94 Gene

Genomics for C11orf94 Gene

Regulatory Elements for C11orf94 Gene

Enhancers for C11orf94 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G045854 1.5 Ensembl ENCODE dbSUPER 11.6 +49.2 49181 6.2 ATF1 PKNOX1 CREB3L1 SIN3A YY1 TCF12 ELK1 FOS ZNF263 JUNB MAPK8IP1 ENSG00000255498 C11orf94 LARGE2 PEX16 DKFZp779M0652 SLC35C1 CRY2
GH11G045879 1.2 ENCODE dbSUPER 13 +26.1 26149 3.1 PKNOX1 ATF1 SIN3A TCF12 GLIS2 ELK1 FOS JUNB TSHZ1 REST C11orf94 ENSG00000255498 PEX16 LARGE2 MAPK8IP1 DKFZp779M0652 CRY2
GH11G045941 0.9 dbSUPER 13 -34.9 -34913 2.3 HDAC1 ATF1 PKNOX1 CBX3 SIN3A YBX1 RAD21 YY1 GATA2 ZNF143 LARGE2 PEX16 C11orf94 ENSG00000255498 ENSG00000254653
GH11G045862 0.8 dbSUPER 11.4 +43.8 43841 1.1 RB1 SAP130 ZMYM3 ARID4B SIN3A RBBP5 ZSCAN9 YY1 GLIS2 ZNF766 C11orf94 ENSG00000255498 PEX16 LARGE2 LOC101928812 CRY2 MAPK8IP1
GH11G045944 0.5 ENCODE 12.5 -38.4 -38367 2.2 ARID1B NFIC TAL1 IKZF1 LARGE2 PEX16 C11orf94 ENSG00000255498 SLC35C1 ENSG00000254653
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C11orf94 on UCSC Golden Path with GeneCards custom track

Genomic Location for C11orf94 Gene

Chromosome:
11
Start:
45,906,513 bp from pter
End:
45,907,282 bp from pter
Size:
770 bases
Orientation:
Minus strand

Genomic View for C11orf94 Gene

Genes around C11orf94 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C11orf94 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C11orf94 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C11orf94 Gene

Proteins for C11orf94 Gene

  • Protein details for C11orf94 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    C9JXX5-CK094_HUMAN
    Recommended name:
    Uncharacterized protein C11orf94
    Protein Accession:
    C9JXX5

    Protein attributes for C11orf94 Gene

    Size:
    98 amino acids
    Molecular mass:
    10902 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C11orf94 Gene

Post-translational modifications for C11orf94 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C11orf94 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C11orf94 Gene

Domains & Families for C11orf94 Gene

Protein Domains for C11orf94 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C11orf94: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C11orf94 Gene

Function for C11orf94 Gene

genes like me logo Genes that share phenotypes with C11orf94: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C11orf94 Gene

Localization for C11orf94 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C11orf94 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for C11orf94 gene
Compartment Confidence
extracellular 4
plasma membrane 2
mitochondrion 1
endoplasmic reticulum 1

Gene Ontology (GO) - Cellular Components for C11orf94 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with C11orf94: view

Pathways & Interactions for C11orf94 Gene

SuperPathways for C11orf94 Gene

No Data Available

Interacting Proteins for C11orf94 Gene

Gene Ontology (GO) - Biological Process for C11orf94 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C11orf94 Gene

Transcripts for C11orf94 Gene

mRNA/cDNA for C11orf94 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C11orf94 Gene

Chromosome 11 open reading frame 94:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C11orf94 Gene

No ASD Table

Relevant External Links for C11orf94 Gene

GeneLoc Exon Structure for
C11orf94
ECgene alternative splicing isoforms for
C11orf94

Expression for C11orf94 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C11orf94 Gene

mRNA differential expression in normal tissues according to GTEx for C11orf94 Gene

This gene is overexpressed in Testis (x43.3).

Protein differential expression in normal tissues from HIPED for C11orf94 Gene

This gene is overexpressed in Cervix (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for C11orf94 Gene



Protein tissue co-expression partners for C11orf94 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of C11orf94 Gene:

C11orf94

SOURCE GeneReport for Unigene cluster for C11orf94 Gene:

Hs.193741
genes like me logo Genes that share expression patterns with C11orf94: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C11orf94 Gene

Orthologs for C11orf94 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C11orf94 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C11H11orf94 34
  • 99.32 (n)
C11orf94 35
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C11orf94 35
  • 85 (a)
OneToOne
C18H11orf94 34
  • 82.31 (n)
mouse
(Mus musculus)
Mammalia 1700029I15Rik 34 16 35
  • 82.65 (n)
rat
(Rattus norvegicus)
Mammalia RGD1563263 34
  • 82.47 (n)
cow
(Bos Taurus)
Mammalia C15H11orf94 34 35
  • 79.93 (n)
oppossum
(Monodelphis domestica)
Mammalia C11orf94 35
  • 50 (a)
OneToOne
Species where no ortholog for C11orf94 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C11orf94 Gene

ENSEMBL:
Gene Tree for C11orf94 (if available)
TreeFam:
Gene Tree for C11orf94 (if available)

Paralogs for C11orf94 Gene

No data available for Paralogs for C11orf94 Gene

Variants for C11orf94 Gene

Sequence variations from dbSNP and Humsavar for C11orf94 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000372980 -- 45,907,982(+) AGCCT(G/T)TACAG upstream-variant-2KB
rs1000697853 -- 45,909,007(+) GGCCA(A/G)TGGAG upstream-variant-2KB
rs1001700743 -- 45,909,069(+) ACCGG(A/G)GCACC upstream-variant-2KB
rs1001960913 -- 45,908,277(+) TCTCC(C/T)CTGAC upstream-variant-2KB
rs1002021223 -- 45,908,017(+) CCCTC(A/G)CAGGC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for C11orf94 Gene

Variant ID Type Subtype PubMed ID
nsv516442 CNV loss 19592680

Variation tolerance for C11orf94 Gene

Residual Variation Intolerance Score: 82.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.00; 20.62% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C11orf94 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C11orf94

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C11orf94 Gene

Disorders for C11orf94 Gene

Relevant External Links for C11orf94

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C11orf94

No disorders were found for C11orf94 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C11orf94 Gene

Publications for C11orf94 Gene

  1. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 4 64
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for C11orf94 Gene

Sources for C11orf94 Gene

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