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Aliases for C11orf94 Gene

Aliases for C11orf94 Gene

  • Chromosome 11 Open Reading Frame 94 2 3

External Ids for C11orf94 Gene

Previous GeneCards Identifiers for C11orf94 Gene

  • GC11M045885
  • GC11M045928
  • GC11M045635

Summaries for C11orf94 Gene

GeneCards Summary for C11orf94 Gene

C11orf94 (Chromosome 11 Open Reading Frame 94) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C11orf94 Gene

Genomics for C11orf94 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for C11orf94 Gene

Start:
45,906,534 bp from pter
End:
45,907,282 bp from pter
Size:
749 bases
Orientation:
Minus strand

Genomic View for C11orf94 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C11orf94 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C11orf94 Gene

No data available for Regulatory Elements for C11orf94 Gene

Proteins for C11orf94 Gene

  • Protein details for C11orf94 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    C9JXX5-CK094_HUMAN
    Recommended name:
    Uncharacterized protein C11orf94
    Protein Accession:
    C9JXX5
    Secondary Accessions:

    Protein attributes for C11orf94 Gene

    Size:
    98 amino acids
    Molecular mass:
    10902 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C11orf94 Gene

Proteomics data for C11orf94 Gene at MOPED

Post-translational modifications for C11orf94 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C11orf94 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C11orf94 Gene

Domains for C11orf94 Gene

Protein Domains for C11orf94 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C11orf94: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C11orf94 Gene

Function for C11orf94 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C11orf94 Gene

Localization for C11orf94 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C11orf94 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C11orf94 Gene COMPARTMENTS Subcellular localization image for C11orf94 gene
Compartment Confidence
extracellular 3
plasma membrane 2
endoplasmic reticulum 1
mitochondrion 1

Gene Ontology (GO) - Cellular Components for C11orf94 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with C11orf94: view

Pathways for C11orf94 Gene

SuperPathways for C11orf94 Gene

No Data Available

Interacting Proteins for C11orf94 Gene

Gene Ontology (GO) - Biological Process for C11orf94 Gene

None

No data available for Pathways by source for C11orf94 Gene

Transcripts for C11orf94 Gene

mRNA/cDNA for C11orf94 Gene

(2) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(4) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C11orf94 Gene

Chromosome 11 open reading frame 94:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C11orf94

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for C11orf94

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C11orf94 Gene

No ASD Table

Relevant External Links for C11orf94 Gene

GeneLoc Exon Structure for
C11orf94
ECgene alternative splicing isoforms for
C11orf94

Expression for C11orf94 Gene

mRNA expression in normal human tissues for C11orf94 Gene

mRNA differential expression in normal tissues according to GTEx for C11orf94 Gene

This gene is overexpressed in Testis (43.3).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C11orf94 Gene

SOURCE GeneReport for Unigene cluster for C11orf94 Gene Hs.193741

genes like me logo Genes that share expressions with C11orf94: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for C11orf94 Gene

Orthologs for C11orf94 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C11orf94 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C11H11orf94 35
  • 99.32 (n)
  • 98.98 (a)
C11orf94 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C15H11orf94 35
  • 79.93 (n)
  • 80.61 (a)
C15H11orf94 36
  • 84 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C11orf94 36
  • 85 (a)
OneToOne
C18H11orf94 35
  • 82.31 (n)
  • 81.63 (a)
mouse
(Mus musculus)
Mammalia 1700029I15Rik 35
  • 82.65 (n)
  • 82.65 (a)
1700029I15Rik 16
1700029I15Rik 36
  • 80 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C11orf94 36
  • 50 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1563263 35
  • 82.47 (n)
  • 83.51 (a)
Species with no ortholog for C11orf94:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C11orf94 Gene

ENSEMBL:
Gene Tree for C11orf94 (if available)
TreeFam:
Gene Tree for C11orf94 (if available)

Paralogs for C11orf94 Gene

No data available for Paralogs for C11orf94 Gene

Variants for C11orf94 Gene

Sequence variations from dbSNP and Humsavar for C11orf94 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs5791709 -- 45,907,663(+) CAGCA(-/C)CCCCC upstream-variant-2KB
rs7925824 -- 45,908,410(+) CACCC(C/T)CTGCA upstream-variant-2KB
rs7926093 -- 45,908,672(+) GCCAC(G/T)GCCAT upstream-variant-2KB
rs11827882 -- 45,907,107(+) CCATC(C/G)GGCCC intron-variant
rs34079878 -- 45,907,462(+) TGTCC(A/G)AGGAA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for C11orf94 Gene

Variant ID Type Subtype PubMed ID
nsv897314 CNV Loss 21882294
nsv516442 CNV Loss 19592680

Relevant External Links for C11orf94 Gene

HapMap Linkage Disequilibrium report
C11orf94

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C11orf94 Gene

Disorders for C11orf94 Gene

No disorders were found for C11orf94 Gene.

No data available for UniProtKB/Swiss-Prot for C11orf94 Gene

Publications for C11orf94 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3
  2. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 4

Products for C11orf94 Gene

Sources for C11orf94 Gene

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