Free for academic non-profit institutions. Other users need a Commercial license

Aliases for C11orf94 Gene

Aliases for C11orf94 Gene

  • Chromosome 11 Open Reading Frame 94 2 3 5

External Ids for C11orf94 Gene

Previous GeneCards Identifiers for C11orf94 Gene

  • GC11M045885
  • GC11M045928
  • GC11M045635
  • GC11M047069
  • GC11M047916
  • GC11M050773
  • GC11M051568
  • GC11M052230
  • GC11M052890
  • GC11M053558

Summaries for C11orf94 Gene

GeneCards Summary for C11orf94 Gene

C11orf94 (Chromosome 11 Open Reading Frame 94) is a Protein Coding gene.

Additional gene information for C11orf94 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C11orf94 Gene

Genomics for C11orf94 Gene

GeneHancer (GH) Regulatory Elements for C11orf94 Gene

Promoters and enhancers for C11orf94 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I045905 Promoter/Enhancer 1.2 EPDnew ENCODE dbSUPER 550.8 +0.1 136 2.9 GATA3 NFIC POLR2A CREB1 SUPT5H C11orf94 ENSG00000255498 SLC35C1 MAPK8IP1
GH11I045879 Enhancer 1.1 ENCODE dbSUPER 13 +26.1 26148 3.1 ATF1 PKNOX1 TCF12 FOS ATF7 NCOA1 REST TSHZ1 ATF4 GMEB1 C11orf94 ENSG00000255498 LARGE2 PEX16 MAPK8IP1 DKFZp779M0652 CRY2
GH11I045854 Enhancer 1.1 Ensembl ENCODE dbSUPER 11.6 +49.2 49180 6.2 MXI1 CLOCK USF1 KLF17 MAX SIN3A ZIC2 RAD21 YY1 ZFHX2 MAPK8IP1 C11orf94 ENSG00000255498 LARGE2 PEX16 DKFZp779M0652 SLC35C1 CRY2
GH11I045941 Enhancer 0.4 dbSUPER 13 -34.9 -34913 2.3 ATF4 ATF7 ATF2 PEX16 LARGE2 C11orf94 ENSG00000255498 PHF21A ENSG00000254653
GH11I045944 Enhancer 0.4 ENCODE 12.5 -38.4 -38367 2.2 NFIC IKZF1 CBFA2T3 LARGE2 PEX16 C11orf94 ENSG00000255498 SLC35C1 PHF21A ENSG00000254653
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around C11orf94 on UCSC Golden Path with GeneCards custom track

Genomic Locations for C11orf94 Gene

Genomic Locations for C11orf94 Gene
chr11:45,906,513-45,907,282
(GRCh38/hg38)
Size:
770 bases
Orientation:
Minus strand
chr11:45,928,085-45,928,833
(GRCh37/hg19)

Genomic View for C11orf94 Gene

Genes around C11orf94 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C11orf94 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C11orf94 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C11orf94 Gene

Proteins for C11orf94 Gene

  • Protein details for C11orf94 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    C9JXX5-CK094_HUMAN
    Recommended name:
    Uncharacterized protein C11orf94
    Protein Accession:
    C9JXX5

    Protein attributes for C11orf94 Gene

    Size:
    98 amino acids
    Molecular mass:
    10902 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C11orf94 Gene

Post-translational modifications for C11orf94 Gene

No Post-translational modifications

Other Protein References for C11orf94 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C11orf94 Gene

Domains & Families for C11orf94 Gene

Gene Families for C11orf94 Gene

Human Protein Atlas (HPA):
  • Predicted secreted proteins

Protein Domains for C11orf94 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C11orf94: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C11orf94 Gene

Function for C11orf94 Gene

genes like me logo Genes that share phenotypes with C11orf94: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C11orf94 Gene

Localization for C11orf94 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C11orf94 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for C11orf94 gene
Compartment Confidence
extracellular 4
plasma membrane 2
mitochondrion 1
endoplasmic reticulum 1

Gene Ontology (GO) - Cellular Components for C11orf94 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with C11orf94: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for C11orf94 Gene

Pathways & Interactions for C11orf94 Gene

SuperPathways for C11orf94 Gene

No Data Available

Interacting Proteins for C11orf94 Gene

Gene Ontology (GO) - Biological Process for C11orf94 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C11orf94 Gene

Drugs & Compounds for C11orf94 Gene

No Compound Related Data Available

Transcripts for C11orf94 Gene

mRNA/cDNA for C11orf94 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(4) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C11orf94 Gene

Chromosome 11 open reading frame 94:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for C11orf94 Gene

No ASD Table

Relevant External Links for C11orf94 Gene

GeneLoc Exon Structure for
C11orf94
ECgene alternative splicing isoforms for
C11orf94

Expression for C11orf94 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for C11orf94 Gene

mRNA differential expression in normal tissues according to GTEx for C11orf94 Gene

This gene is overexpressed in Testis (x43.3).

Protein differential expression in normal tissues from HIPED for C11orf94 Gene

This gene is overexpressed in Cervix (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for C11orf94 Gene



Protein tissue co-expression partners for C11orf94 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of C11orf94 Gene:

C11orf94

SOURCE GeneReport for Unigene cluster for C11orf94 Gene:

Hs.193741
genes like me logo Genes that share expression patterns with C11orf94: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C11orf94 Gene

Orthologs for C11orf94 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C11orf94 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C11H11orf94 33
  • 99.32 (n)
C11orf94 34
  • 99 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C11orf94 34
  • 85 (a)
OneToOne
C18H11orf94 33
  • 82.31 (n)
mouse
(Mus musculus)
Mammalia 1700029I15Rik 33 16 34
  • 82.65 (n)
rat
(Rattus norvegicus)
Mammalia RGD1563263 33
  • 82.47 (n)
cow
(Bos Taurus)
Mammalia C15H11orf94 33 34
  • 79.93 (n)
oppossum
(Monodelphis domestica)
Mammalia C11orf94 34
  • 50 (a)
OneToOne
Species where no ortholog for C11orf94 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C11orf94 Gene

ENSEMBL:
Gene Tree for C11orf94 (if available)
TreeFam:
Gene Tree for C11orf94 (if available)

Paralogs for C11orf94 Gene

No data available for Paralogs for C11orf94 Gene

Variants for C11orf94 Gene

Sequence variations from dbSNP and Humsavar for C11orf94 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000372980 -- 45,907,982(-) G/T upstream_transcript_variant
rs1000697853 -- 45,909,007(-) A/G upstream_transcript_variant
rs1001700743 -- 45,909,069(-) G/A upstream_transcript_variant
rs1001960913 -- 45,908,277(-) T/C upstream_transcript_variant
rs1002021223 -- 45,908,017(-) G/A upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for C11orf94 Gene

Variant ID Type Subtype PubMed ID
nsv516442 CNV loss 19592680

Variation tolerance for C11orf94 Gene

Residual Variation Intolerance Score: 82.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.00; 20.62% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for C11orf94 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C11orf94

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C11orf94 Gene

Disorders for C11orf94 Gene

Additional Disease Information for C11orf94

No disorders were found for C11orf94 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C11orf94 Gene

Publications for C11orf94 Gene

  1. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 4 58
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for C11orf94 Gene

Sources for C11orf94 Gene

Content
Loading form....