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Aliases for C11orf85 Gene

Aliases for C11orf85 Gene

  • Chromosome 11 Open Reading Frame 85 2 3

External Ids for C11orf85 Gene

Previous GeneCards Identifiers for C11orf85 Gene

  • GC11M064463
  • GC11M064705
  • GC11M061032

Summaries for C11orf85 Gene

GeneCards Summary for C11orf85 Gene

C11orf85 (Chromosome 11 Open Reading Frame 85) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C11orf85 Gene

Genomics for C11orf85 Gene

Regulatory Elements for C11orf85 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for C11orf85 Gene

64,937,517 bp from pter
64,972,112 bp from pter
34,596 bases
Minus strand

Genomic View for C11orf85 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C11orf85 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C11orf85 Gene

Proteins for C11orf85 Gene

  • Protein details for C11orf85 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Uncharacterized protein C11orf85
    Protein Accession:
    Secondary Accessions:
    • B3KS99

    Protein attributes for C11orf85 Gene

    216 amino acids
    Molecular mass:
    24809 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C11orf85 Gene


neXtProt entry for C11orf85 Gene

Proteomics data for C11orf85 Gene at MOPED

Post-translational modifications for C11orf85 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C11orf85 Gene

Antibody Products

No data available for DME Specific Peptides for C11orf85 Gene

Domains & Families for C11orf85 Gene

Protein Domains for C11orf85 Gene


Suggested Antigen Peptide Sequences for C11orf85 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C11orf85: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C11orf85 Gene

Function for C11orf85 Gene

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C11orf85

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C11orf85 Gene

Localization for C11orf85 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for C11orf85 Gene

Pathways & Interactions for C11orf85 Gene

SuperPathways for C11orf85 Gene

No Data Available

Interacting Proteins for C11orf85 Gene

Gene Ontology (GO) - Biological Process for C11orf85 Gene


No data available for Pathways by source and SIGNOR curated interactions for C11orf85 Gene

Drugs & Compounds for C11orf85 Gene

No Compound Related Data Available

Transcripts for C11orf85 Gene

Unigene Clusters for C11orf85 Gene

Chromosome 11 open reading frame 85:
Representative Sequences:

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for C11orf85

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for C11orf85 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13
SP2: - - - - -

Relevant External Links for C11orf85 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C11orf85 Gene

mRNA expression in normal human tissues for C11orf85 Gene

mRNA differential expression in normal tissues according to GTEx for C11orf85 Gene

This gene is overexpressed in Testis (x40.1).

Protein differential expression in normal tissues from HIPED for C11orf85 Gene

This gene is overexpressed in Plasma (67.1).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for C11orf85 Gene

SOURCE GeneReport for Unigene cluster for C11orf85 Gene Hs.567793

genes like me logo Genes that share expression patterns with C11orf85: view

Protein tissue co-expression partners for C11orf85 Gene

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for C11orf85 Gene

Orthologs for C11orf85 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C11orf85 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia C29H11orf85 35
  • 83.33 (n)
  • 80.59 (a)
C11orf85 36
  • 54 (a)
(Canis familiaris)
Mammalia C18H11orf85 35
  • 86.86 (n)
  • 82.94 (a)
C11orf85 36
  • 76 (a)
(Mus musculus)
Mammalia 1700123I01Rik 35
  • 75 (n)
  • 65.38 (a)
1700123I01Rik 16
1700123I01Rik 36
  • 52 (a)
(Rattus norvegicus)
Mammalia LOC499306 35
  • 81.59 (n)
  • 75 (a)
(Ornithorhynchus anatinus)
Mammalia C11orf85 36
  • 63 (a)
(Pan troglodytes)
Mammalia C11orf85 36
  • 100 (a)
Species with no ortholog for C11orf85:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C11orf85 Gene

Gene Tree for C11orf85 (if available)
Gene Tree for C11orf85 (if available)

Paralogs for C11orf85 Gene

No data available for Paralogs for C11orf85 Gene

Variants for C11orf85 Gene

Sequence variations from dbSNP and Humsavar for C11orf85 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs183578 -- 64,961,114(-) CAGCA(A/G)TGTAA intron-variant
rs183579 -- 64,964,185(-) AGGGA(C/G)ATCAC intron-variant
rs240565 -- 64,963,577(-) TACAG(G/T)CGTGA intron-variant
rs240566 -- 64,962,905(-) GGGTG(A/G)TCTGC intron-variant
rs240567 -- 64,962,213(-) GTACA(A/G)CACAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C11orf85 Gene

Variant ID Type Subtype PubMed ID
dgv1173n71 CNV Loss 21882294
nsv526181 CNV Gain 19592680

Variation tolerance for C11orf85 Gene

Residual Variation Intolerance Score: 47.52% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.65; 13.96% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C11orf85 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C11orf85 Gene

Disorders for C11orf85 Gene

Relevant External Links for C11orf85

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with C11orf85: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C11orf85 Gene

Publications for C11orf85 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 67
  2. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 67
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 67
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67

Products for C11orf85 Gene

Sources for C11orf85 Gene

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