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Aliases for C11orf84 Gene

Aliases for C11orf84 Gene

  • Chromosome 11 Open Reading Frame 84 2 3

External Ids for C11orf84 Gene

Summaries for C11orf84 Gene

GeneCards Summary for C11orf84 Gene

C11orf84 (Chromosome 11 Open Reading Frame 84) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C11orf84 Gene

Genomics for C11orf84 Gene

Genomic Location for C11orf84 Gene

Start:
63,813,374 bp from pter
End:
63,827,718 bp from pter
Size:
14,345 bases
Orientation:
Plus strand

Genomic View for C11orf84 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C11orf84 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C11orf84 Gene

Regulatory Elements for C11orf84 Gene

Proteins for C11orf84 Gene

  • Protein details for C11orf84 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BUA3-CK084_HUMAN
    Recommended name:
    Uncharacterized protein C11orf84
    Protein Accession:
    Q9BUA3
    Secondary Accessions:
    • Q68CV7
    • Q6PHS2
    • Q96IH0

    Protein attributes for C11orf84 Gene

    Size:
    381 amino acids
    Molecular mass:
    41037 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C11orf84 Gene

Proteomics data for C11orf84 Gene at MOPED

Post-translational modifications for C11orf84 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C11orf84 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C11orf84 Gene

Domains for C11orf84 Gene

Protein Domains for C11orf84 Gene

ProtoNet:
genes like me logo Genes that share domains with C11orf84: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C11orf84 Gene

Function for C11orf84 Gene

miRNA for C11orf84 Gene

miRTarBase miRNAs that target C11orf84

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for C11orf84 Gene

Localization for C11orf84 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C11orf84 Gene COMPARTMENTS Subcellular localization image for C11orf84 gene
Compartment Confidence
nucleus 3
cytosol 2
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for C11orf84 Gene

Pathways for C11orf84 Gene

SuperPathways for C11orf84 Gene

No Data Available

Interacting Proteins for C11orf84 Gene

Gene Ontology (GO) - Biological Process for C11orf84 Gene

None

No data available for Pathways by source for C11orf84 Gene

Transcripts for C11orf84 Gene

Unigene Clusters for C11orf84 Gene

Chromosome 11 open reading frame 84:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C11orf84 Gene

ExUns: 1 ^ 2a · 2b ^ 3a · 3b ^ 4a · 4b ^ 5a · 5b ^ 6
SP1: -
SP2:
SP3: - -

Relevant External Links for C11orf84 Gene

GeneLoc Exon Structure for
C11orf84
ECgene alternative splicing isoforms for
C11orf84

Expression for C11orf84 Gene

mRNA expression in normal human tissues for C11orf84 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for C11orf84 Gene

SOURCE GeneReport for Unigene cluster for C11orf84 Gene Hs.502793

genes like me logo Genes that share expressions with C11orf84: view

Orthologs for C11orf84 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C11orf84 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C11H11orf84 36
  • 97.89 (n)
  • 97.99 (a)
C11orf84 37
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C29H11orf84 36
  • 85.24 (n)
  • 83.2 (a)
C29H11orf84 37
  • 82 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C11orf84 37
  • 89 (a)
OneToOne
C18H11orf84 36
  • 88.07 (n)
  • 87.89 (a)
mouse
(Mus musculus)
Mammalia AI846148 36
  • 82.02 (n)
  • 82.63 (a)
AI846148 16
AI846148 37
  • 82 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C11orf84 37
  • 53 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C11orf84 37
  • 48 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1308106 36
  • 82.12 (n)
  • 82.75 (a)
Species with no ortholog for C11orf84:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C11orf84 Gene

ENSEMBL:
Gene Tree for C11orf84 (if available)
TreeFam:
Gene Tree for C11orf84 (if available)

Paralogs for C11orf84 Gene

No data available for Paralogs for C11orf84 Gene

Variants for C11orf84 Gene

Sequence variations from dbSNP and Humsavar for C11orf84 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs8995 -- 63,827,600(+) TCCCA(A/C)CCCTG utr-variant-3-prime
rs479329 -- 63,816,902(+) GTGGC(C/T)CATGC intron-variant
rs480874 -- 63,824,493(-) tacgc(A/T)gtgcc intron-variant
rs483858 -- 63,824,140(-) ccgag(G/T)tcagg intron-variant
rs502529 -- 63,819,776(+) ACAGG(C/T)GTGAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C11orf84 Gene

Variant ID Type Subtype PubMed ID
esv33730 CNV Gain 17666407

Relevant External Links for C11orf84 Gene

HapMap Linkage Disequilibrium report
C11orf84

Disorders for C11orf84 Gene

No disorders were found for C11orf84 Gene.

No data available for UniProtKB/Swiss-Prot for C11orf84 Gene

Publications for C11orf84 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  3. Tandem immunoprecipitation of phosphotyrosine-mass spectrometry (TIPY-MS) indicates C19ORF19 becomes tyrosine-phosphorylated and associated with activated epidermal growth factor receptor. (PMID: 18271526) Tong J. … Moran M.F. (J. Proteome Res. 2008) 3
  4. System-wide changes to SUMO modifications in response to heat shock. (PMID: 19471022) Golebiowski F. … Hay R.T. (Sci Signal 2009) 3
  5. 14-3-3 epsilon dynamically interacts with key components of mitogen-activated protein kinase signal module for selective modulation of the TNF-alpha-induced time course-dependent NF-kappaB activity. (PMID: 20462248) Zuo S. … Chen X. (J. Proteome Res. 2010) 3

Products for C11orf84 Gene

Sources for C11orf84 Gene

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