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Aliases for C11orf72 Gene

Subcategory (RNA class) for C11orf72 Gene

ncRNA

Quality Score for this RNA gene is

3

Aliases for C11orf72 Gene

  • Chromosome 11 Open Reading Frame 72 2 3

External Ids for C11orf72 Gene

Summaries for C11orf72 Gene

GeneCards Summary for C11orf72 Gene

C11orf72 (Chromosome 11 Open Reading Frame 72) is a RNA Gene, and belongs to ncRNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C11orf72 Gene

Genomics for C11orf72 Gene

Genomic Location for C11orf72 Gene

Start:
67,602,880 bp from pter
End:
67,606,706 bp from pter
Size:
3,827 bases
Orientation:
Minus strand

Genomic View for C11orf72 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C11orf72 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C11orf72 Gene

No data available for Regulatory Elements for C11orf72 Gene

Proteins for C11orf72 Gene

  • Protein details for C11orf72 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NBR9-CK072_HUMAN
    Recommended name:
    Uncharacterized protein C11orf72
    Protein Accession:
    Q8NBR9
    Secondary Accessions:

    Protein attributes for C11orf72 Gene

    Size:
    251 amino acids
    Molecular mass:
    27887 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C11orf72 Gene

Proteomics data for C11orf72 Gene at MOPED

Post-translational modifications for C11orf72 Gene

No Post-translational modifications

No data available for DME Specific Peptides for C11orf72 Gene

Domains for C11orf72 Gene

Protein Domains for C11orf72 Gene

ProtoNet:
genes like me logo Genes that share domains with C11orf72: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C11orf72 Gene

Function for C11orf72 Gene

Phenotypes for C11orf72 Gene

GenomeRNAi human phenotypes for C11orf72:
genes like me logo Genes that share phenotypes with C11orf72: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C11orf72 Gene

Localization for C11orf72 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C11orf72 Gene COMPARTMENTS Subcellular localization image for C11orf72 gene
Compartment Confidence
cytosol 2
nucleus 2
peroxisome 2
extracellular 1

No data available for Gene Ontology (GO) - Cellular Components for C11orf72 Gene

Pathways for C11orf72 Gene

SuperPathways for C11orf72 Gene

No Data Available

Interacting Proteins for C11orf72 Gene

Gene Ontology (GO) - Biological Process for C11orf72 Gene

None

No data available for Pathways by source for C11orf72 Gene

Transcripts for C11orf72 Gene

mRNA/cDNA for C11orf72 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C11orf72 Gene

Chromosome 11 open reading frame 72:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C11orf72 Gene

No ASD Table

Relevant External Links for C11orf72 Gene

GeneLoc Exon Structure for
C11orf72
ECgene alternative splicing isoforms for
C11orf72

Expression for C11orf72 Gene

mRNA expression in normal human tissues for C11orf72 Gene

mRNA differential expression in normal tissues according to GTEx for C11orf72 Gene

This gene is overexpressed in Testis (5.8).

SOURCE GeneReport for Unigene cluster for C11orf72 Gene Hs.382074

genes like me logo Genes that share expressions with C11orf72: view

Orthologs for C11orf72 Gene

Evolution for C11orf72 Gene

ENSEMBL:
Gene Tree for C11orf72 (if available)
TreeFam:
Gene Tree for C11orf72 (if available)

No data available for Orthologs for C11orf72 Gene

Paralogs for C11orf72 Gene

No data available for Paralogs for C11orf72 Gene

Variants for C11orf72 Gene

Sequence variations from dbSNP and Humsavar for C11orf72 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
VAR_029584 -

Relevant External Links for C11orf72 Gene

HapMap Linkage Disequilibrium report
C11orf72

No data available for Structural Variations from Database of Genomic Variants (DGV) for C11orf72 Gene

Disorders for C11orf72 Gene

No disorders were found for C11orf72 Gene.

No data available for UniProtKB/Swiss-Prot for C11orf72 Gene

Publications for C11orf72 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 3 4
  4. [Experimental analysis of human specific protein coding open reading frame c11orf72]. (PMID: 23964515) Baskaev K.K. … Buzdin A.A. (Bioorg. Khim. 2013) 3
  5. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3

Products for C11orf72 Gene

Sources for C11orf72 Gene

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