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Aliases for C11orf72 Gene

Subcategory (RNA class) for C11orf72 Gene


Quality Score for this RNA gene is


Aliases for C11orf72 Gene

  • Chromosome 11 Open Reading Frame 72 2 3

External Ids for C11orf72 Gene

Previous GeneCards Identifiers for C11orf72 Gene

  • GC11M067127
  • GC11M067372

Summaries for C11orf72 Gene

GeneCards Summary for C11orf72 Gene

C11orf72 (Chromosome 11 Open Reading Frame 72) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C11orf72 Gene

Genomics for C11orf72 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for C11orf72 Gene

67,602,880 bp from pter
67,606,706 bp from pter
3,827 bases
Minus strand

Genomic View for C11orf72 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C11orf72 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C11orf72 Gene

No data available for Regulatory Elements for C11orf72 Gene

Proteins for C11orf72 Gene

  • Protein details for C11orf72 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Uncharacterized protein C11orf72
    Protein Accession:

    Protein attributes for C11orf72 Gene

    251 amino acids
    Molecular mass:
    27887 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C11orf72 Gene

Proteomics data for C11orf72 Gene at MOPED

Post-translational modifications for C11orf72 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for C11orf72 Gene

Domains & Families for C11orf72 Gene

Protein Domains for C11orf72 Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C11orf72: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C11orf72 Gene

Function for C11orf72 Gene

Phenotypes for C11orf72 Gene

GenomeRNAi human phenotypes for C11orf72:
genes like me logo Genes that share phenotypes with C11orf72: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C11orf72 Gene

Localization for C11orf72 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for C11orf72 Gene

Pathways & Interactions for C11orf72 Gene

SuperPathways for C11orf72 Gene

No Data Available

Interacting Proteins for C11orf72 Gene

Gene Ontology (GO) - Biological Process for C11orf72 Gene


No data available for Pathways by source and SIGNOR curated interactions for C11orf72 Gene

Drugs & Compounds for C11orf72 Gene

No Compound Related Data Available

Transcripts for C11orf72 Gene

mRNA/cDNA for C11orf72 Gene

(1) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C11orf72 Gene

Chromosome 11 open reading frame 72:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C11orf72 Gene

No ASD Table

Relevant External Links for C11orf72 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for C11orf72 Gene

mRNA expression in normal human tissues for C11orf72 Gene

mRNA differential expression in normal tissues according to GTEx for C11orf72 Gene

This gene is overexpressed in Testis (x5.8).

SOURCE GeneReport for Unigene cluster for C11orf72 Gene Hs.382074

genes like me logo Genes that share expression patterns with C11orf72: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for C11orf72 Gene

Orthologs for C11orf72 Gene

Evolution for C11orf72 Gene

Gene Tree for C11orf72 (if available)
Gene Tree for C11orf72 (if available)

No data available for Orthologs for C11orf72 Gene

Paralogs for C11orf72 Gene

No data available for Paralogs for C11orf72 Gene

Variants for C11orf72 Gene

Sequence variations from dbSNP and Humsavar for C11orf72 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs4024254 -- 67,603,295(-) CTCAG(C/T)ATTCA nc-transcript-variant
rs4930450 -- 67,602,515(+) AGAGC(A/G)AGACT downstream-variant-500B
rs7945823 -- 67,604,074(+) gatga(C/G)tctta nc-transcript-variant
rs28894705 -- 67,603,548(+) TGTTT(C/G)TCGAA nc-transcript-variant
rs35250482 -- 67,604,630(+) CTGTT(-/C)CCATG nc-transcript-variant

Variation tolerance for C11orf72 Gene

Gene Damage Index Score: 5.31; 70.57% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for C11orf72 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for C11orf72 Gene

Disorders for C11orf72 Gene

Relevant External Links for C11orf72

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with C11orf72: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C11orf72 Gene

Publications for C11orf72 Gene

  1. [Experimental analysis of human specific protein coding open reading frame c11orf72]. (PMID: 23964515) Baskaev K.K. … Buzdin A.A. (Bioorg. Khim. 2013) 67
  2. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 67
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 67
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67

Products for C11orf72 Gene

Sources for C11orf72 Gene

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