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Aliases for C11orf70 Gene

Aliases for C11orf70 Gene

  • Chromosome 11 Open Reading Frame 70 2 3

External Ids for C11orf70 Gene

Summaries for C11orf70 Gene

GeneCards Summary for C11orf70 Gene

C11orf70 (Chromosome 11 Open Reading Frame 70) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C11orf70 Gene

Genomics for C11orf70 Gene

Genomic Location for C11orf70 Gene

Start:
102,047,416 bp from pter
End:
102,084,560 bp from pter
Size:
37,145 bases
Orientation:
Plus strand

Genomic View for C11orf70 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C11orf70 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C11orf70 Gene

Regulatory Elements for C11orf70 Gene

Transcription factor binding sites by QIAGEN in the C11orf70 gene promoter:

Proteins for C11orf70 Gene

  • Protein details for C11orf70 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BRQ4-CK070_HUMAN
    Recommended name:
    Uncharacterized protein C11orf70
    Protein Accession:
    Q9BRQ4
    Secondary Accessions:
    • E9PJU1

    Protein attributes for C11orf70 Gene

    Size:
    267 amino acids
    Molecular mass:
    30859 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C11orf70 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C11orf70 Gene

Proteomics data for C11orf70 Gene at MOPED

Post-translational modifications for C11orf70 Gene

No Post-translational modifications

Other Protein References for C11orf70 Gene

No data available for DME Specific Peptides for C11orf70 Gene

Domains for C11orf70 Gene

Protein Domains for C11orf70 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with C11orf70: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C11orf70 Gene

Function for C11orf70 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C11orf70 Gene

Localization for C11orf70 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C11orf70 Gene COMPARTMENTS Subcellular localization image for C11orf70 gene
Compartment Confidence
nucleus 2
cytosol 1
extracellular 1
mitochondrion 1
peroxisome 1

No data available for Gene Ontology (GO) - Cellular Components for C11orf70 Gene

Pathways for C11orf70 Gene

SuperPathways for C11orf70 Gene

No Data Available

Interacting Proteins for C11orf70 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000414390%0d%0a9606.ENSP00000254108%0d%0a
Selected Interacting proteins: ENSP00000414390 for C11orf70 Gene via STRING

Symbol External ID(s) Details
FUS

Gene Ontology (GO) - Biological Process for C11orf70 Gene

None

No data available for Pathways by source for C11orf70 Gene

Transcripts for C11orf70 Gene

Unigene Clusters for C11orf70 Gene

Chromosome 11 open reading frame 70:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C11orf70 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b · 4c ^ 5a · 5b ^ 6 ^ 7
SP1: -
SP2: - - -
SP3:
SP4:

Relevant External Links for C11orf70 Gene

GeneLoc Exon Structure for
C11orf70
ECgene alternative splicing isoforms for
C11orf70

Expression for C11orf70 Gene

mRNA expression in normal human tissues for C11orf70 Gene

mRNA differential expression in normal tissues according to GTEx for C11orf70 Gene

This gene is overexpressed in Testis (11.0).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for C11orf70 Gene

SOURCE GeneReport for Unigene cluster for C11orf70 Gene Hs.98328

genes like me logo Genes that share expressions with C11orf70: view

Orthologs for C11orf70 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C11orf70 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C11H11orf70 36
  • 99.38 (n)
  • 99.63 (a)
C11ORF70 37
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia -- 37
  • 88 (a)
OneToMany
-- 37
  • 75 (a)
OneToMany
C15H11orf70 36
  • 90.14 (n)
  • 87.27 (a)
dog
(Canis familiaris)
Mammalia C11orf70 37
  • 89 (a)
OneToOne
C5H11orf70 36
  • 90.48 (n)
  • 89.16 (a)
mouse
(Mus musculus)
Mammalia 9230110C19Rik 36
  • 83.52 (n)
  • 83.52 (a)
9230110C19Rik 16
9230110C19Rik 37
  • 84 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C11orf70 37
  • 69 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C11orf70 37
  • 76 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC654482 36
  • 82.27 (n)
  • 82.77 (a)
chicken
(Gallus gallus)
Aves C1H11ORF70 36
  • 67.68 (n)
  • 64.26 (a)
C1H11ORF70 37
  • 64 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia C11orf70 37
  • 57 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia c11orf70 36
  • 66.14 (n)
  • 62.55 (a)
Str.17259 36
zebrafish
(Danio rerio)
Actinopterygii C21H11orf70 37
  • 49 (a)
OneToOne
si:rp71-1p14.7 36
  • 58.02 (n)
  • 51.15 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 37
  • 42 (a)
OneToOne
Species with no ortholog for C11orf70:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C11orf70 Gene

ENSEMBL:
Gene Tree for C11orf70 (if available)
TreeFam:
Gene Tree for C11orf70 (if available)

Paralogs for C11orf70 Gene

No data available for Paralogs for C11orf70 Gene

Variants for C11orf70 Gene

Sequence variations from dbSNP and Humsavar for C11orf70 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs948734 -- 102,058,178(+) CCACC(C/T)CCGGA intron-variant
rs2156168 -- 102,057,248(+) acagg(A/G)aaatc intron-variant
rs4366456 -- 102,050,398(+) CACTA(C/G)TGAAC intron-variant
rs6590945 -- 102,083,569(+) AACAT(G/T)TCTAC utr-variant-3-prime
rs6590946 -- 102,083,728(+) AGTAA(C/T)GTTCT utr-variant-3-prime, downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for C11orf70 Gene

Variant ID Type Subtype PubMed ID
nsv898333 CNV Gain 21882294

Relevant External Links for C11orf70 Gene

HapMap Linkage Disequilibrium report
C11orf70

Disorders for C11orf70 Gene

No disorders were found for C11orf70 Gene.

No data available for UniProtKB/Swiss-Prot for C11orf70 Gene

Publications for C11orf70 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics. (PMID: 21145461) Bennett E.J. … Harper J.W. (Cell 2010) 3
  4. Interaction of amyotrophic lateral sclerosis/frontotemporal lobar degeneration-associated fused-in-sarcoma with proteins involved in metabolic and protein degradation pathways. (PMID: 25192599) Wang T. … Xu J. (Neurobiol. Aging 2015) 3
  5. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 4

Products for C11orf70 Gene

Sources for C11orf70 Gene

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