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Aliases for C11orf68 Gene

Aliases for C11orf68 Gene

  • Chromosome 11 Open Reading Frame 68 2 3
  • Basophilic Leukemia-Expressed Protein Bles03 3 4
  • Protein P5326 3 4
  • BLES03 3 4
  • Basophilic Leukemia Expressed Protein BLES03 3
  • Basophilic Leukemia-Expressed Protein 2
  • UPF0696 Protein C11orf68 3
  • P5326 3

External Ids for C11orf68 Gene

Summaries for C11orf68 Gene

GeneCards Summary for C11orf68 Gene

C11orf68 (Chromosome 11 Open Reading Frame 68) is a Protein Coding gene. Diseases associated with C11orf68 include leukemia.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C11orf68 Gene

Genomics for C11orf68 Gene

Genomic Location for C11orf68 Gene

Start:
65,916,808 bp from pter
End:
65,919,117 bp from pter
Size:
2,310 bases
Orientation:
Minus strand

Genomic View for C11orf68 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C11orf68 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C11orf68 Gene

Regulatory Elements for C11orf68 Gene

Proteins for C11orf68 Gene

  • Protein details for C11orf68 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H3H3-CK068_HUMAN
    Recommended name:
    UPF0696 protein C11orf68
    Protein Accession:
    Q9H3H3
    Secondary Accessions:
    • J3KQG9
    • Q9BT13

    Protein attributes for C11orf68 Gene

    Size:
    251 amino acids
    Molecular mass:
    27355 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH13185.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Three dimensional structures from OCA and Proteopedia for C11orf68 Gene

    Alternative splice isoforms for C11orf68 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C11orf68 Gene

Proteomics data for C11orf68 Gene at MOPED

Post-translational modifications for C11orf68 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C11orf68 Gene

No data available for DME Specific Peptides for C11orf68 Gene

Domains for C11orf68 Gene

Protein Domains for C11orf68 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for C11orf68 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9H3H3

UniProtKB/Swiss-Prot:

CK068_HUMAN
Family:
  • Belongs to the UPF0696 family.:
    • Q9H3H3
genes like me logo Genes that share domains with C11orf68: view

No data available for Gene Families for C11orf68 Gene

Function for C11orf68 Gene

Gene Ontology (GO) - Molecular Function for C11orf68 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 16189514
GO:0044822 poly(A) RNA binding IDA 22658674
genes like me logo Genes that share ontologies with C11orf68: view

Phenotypes for C11orf68 Gene

GenomeRNAi human phenotypes for C11orf68:
genes like me logo Genes that share phenotypes with C11orf68: view

miRNA for C11orf68 Gene

miRTarBase miRNAs that target C11orf68

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for C11orf68 Gene

Localization for C11orf68 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C11orf68 Gene COMPARTMENTS Subcellular localization image for C11orf68 gene
Compartment Confidence
mitochondrion 2
cytosol 1
extracellular 1
nucleus 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for C11orf68 Gene

Pathways for C11orf68 Gene

SuperPathways for C11orf68 Gene

No Data Available

Gene Ontology (GO) - Biological Process for C11orf68 Gene

None

No data available for Pathways by source for C11orf68 Gene

Transcripts for C11orf68 Gene

mRNA/cDNA for C11orf68 Gene

Unigene Clusters for C11orf68 Gene

Chromosome 11 open reading frame 68:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C11orf68 Gene

ExUns: 1 ^ 2a · 2b
SP1:
SP2:

Relevant External Links for C11orf68 Gene

GeneLoc Exon Structure for
C11orf68
ECgene alternative splicing isoforms for
C11orf68

Expression for C11orf68 Gene

mRNA expression in normal human tissues for C11orf68 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for C11orf68 Gene

SOURCE GeneReport for Unigene cluster for C11orf68 Gene Hs.433573

genes like me logo Genes that share expressions with C11orf68: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for C11orf68 Gene

Orthologs for C11orf68 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C11orf68 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C11H11orf68 35
  • 99.2 (n)
  • 99.32 (a)
C11ORF68 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C29H11orf68 35
  • 91.21 (n)
  • 95.97 (a)
C29H11orf68 36
  • 93 (a)
OneToOne
dog
(Canis familiaris)
Mammalia C11orf68 36
  • 92 (a)
OneToOne
C18H11orf68 35
  • 90.23 (n)
  • 95.97 (a)
mouse
(Mus musculus)
Mammalia AI837181 35
  • 89.74 (n)
  • 94.87 (a)
AI837181 16
AI837181 36
  • 89 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C11orf68 36
  • 81 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Bles03 35
  • 90.23 (n)
  • 95.6 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia c11orf68 35
  • 59.03 (n)
  • 56.54 (a)
Str.20341 35
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.5323 35
zebrafish
(Danio rerio)
Actinopterygii C7H11orf68 36
  • 56 (a)
OneToOne
zgc63470 35
zgc:63470 35
  • 63.92 (n)
  • 59.31 (a)
Species with no ortholog for C11orf68:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C11orf68 Gene

ENSEMBL:
Gene Tree for C11orf68 (if available)
TreeFam:
Gene Tree for C11orf68 (if available)

Paralogs for C11orf68 Gene

No data available for Paralogs for C11orf68 Gene

Variants for C11orf68 Gene

Sequence variations from dbSNP and Humsavar for C11orf68 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs10791832 -- 65,916,447(+) GCCTA(A/G)GGTGC downstream-variant-500B
rs11227352 -- 65,917,141(+) TAGCG(A/G)GGGAT utr-variant-3-prime
rs12288911 -- 65,916,800(+) ACCAC(A/C)AAGAC downstream-variant-500B
rs35117474 -- 65,916,810(+) CAGTA(-/T)TTTAA utr-variant-3-prime
rs35192938 -- 65,917,051(+) ATGAA(-/G)GCTCC utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for C11orf68 Gene

Variant ID Type Subtype PubMed ID
dgv393e1 CNV Complex 17122850
dgv1185n71 CNV Loss 21882294
nsv897764 CNV Loss 21882294
nsv832191 CNV Loss 17160897
nsv897767 CNV Loss 21882294

Relevant External Links for C11orf68 Gene

HapMap Linkage Disequilibrium report
C11orf68

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C11orf68 Gene

Disorders for C11orf68 Gene

(1) MalaCards Diseases for C11orf68 Gene

Search for C11orf68 Gene in MalaCards »
genes like me logo Genes that share disorders with C11orf68: view

No data available for UniProtKB/Swiss-Prot for C11orf68 Gene

Publications for C11orf68 Gene

  1. The structure at 2.5 A resolution of human basophilic leukemia- expressed protein BLES03. (PMID: 16511166) Bitto E. … Phillips G.N. Jr. (Acta Crystallogr. F 2005) 2 3 4 23
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. A human protein-protein interaction network: a resource for annotating the proteome. (PMID: 16169070) Stelzl U. … Wanker E.E. (Cell 2005) 3
  4. Towards a proteome-scale map of the human protein-protein interaction network. (PMID: 16189514) Rual J.F. … Vidal M. (Nature 2005) 3
  5. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3

Products for C11orf68 Gene

Sources for C11orf68 Gene

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