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Aliases for C11orf63 Gene

Aliases for C11orf63 Gene

  • Chromosome 11 Open Reading Frame 63 2 3

External Ids for C11orf63 Gene

Summaries for C11orf63 Gene

GeneCards Summary for C11orf63 Gene

C11orf63 (Chromosome 11 Open Reading Frame 63) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C11orf63 Gene

Genomics for C11orf63 Gene

Genomic Location for C11orf63 Gene

Start:
122,882,528 bp from pter
End:
122,959,798 bp from pter
Size:
77,271 bases
Orientation:
Plus strand

Genomic View for C11orf63 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C11orf63 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C11orf63 Gene

Regulatory Elements for C11orf63 Gene

Proteins for C11orf63 Gene

  • Protein details for C11orf63 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6NUN7-CK063_HUMAN
    Recommended name:
    Uncharacterized protein C11orf63
    Protein Accession:
    Q6NUN7
    Secondary Accessions:
    • A8K6G0
    • Q96GB5
    • Q9H5D6

    Protein attributes for C11orf63 Gene

    Size:
    778 amino acids
    Molecular mass:
    88569 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH09820.2; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=BAB15691.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for C11orf63 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C11orf63 Gene

Proteomics data for C11orf63 Gene at MOPED

Post-translational modifications for C11orf63 Gene

No Post-translational modifications

Other Protein References for C11orf63 Gene

No data available for DME Specific Peptides for C11orf63 Gene

Domains for C11orf63 Gene

Protein Domains for C11orf63 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with C11orf63: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C11orf63 Gene

Function for C11orf63 Gene

genes like me logo Genes that share phenotypes with C11orf63: view

miRNA for C11orf63 Gene

miRTarBase miRNAs that target C11orf63

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , Transcription Factor Targeting and HOMER Transcription for C11orf63 Gene

Localization for C11orf63 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C11orf63 Gene COMPARTMENTS Subcellular localization image for C11orf63 gene
Compartment Confidence
nucleus 3
cytosol 2
mitochondrion 1

No data available for Gene Ontology (GO) - Cellular Components for C11orf63 Gene

Pathways for C11orf63 Gene

SuperPathways for C11orf63 Gene

No Data Available

Interacting Proteins for C11orf63 Gene

STRING Interaction Network Preview (showing 2 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000227349%0d%0a9606.ENSP00000362931%0d%0a9606.ENSP00000276326%0d%0a
Selected Interacting proteins: ENSP00000227349 Q6NUN7-CK063_HUMAN for C11orf63 Gene via STRING I2D

Gene Ontology (GO) - Biological Process for C11orf63 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007420 brain development IEA --
GO:0032053 ciliary basal body organization IEA --
GO:0033326 cerebrospinal fluid secretion IEA --
GO:0035082 axoneme assembly IEA --
genes like me logo Genes that share ontologies with C11orf63: view

No data available for Pathways by source for C11orf63 Gene

Transcripts for C11orf63 Gene

Unigene Clusters for C11orf63 Gene

Chromosome 11 open reading frame 63:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C11orf63 Gene

No ASD Table

Relevant External Links for C11orf63 Gene

GeneLoc Exon Structure for
C11orf63
ECgene alternative splicing isoforms for
C11orf63

Expression for C11orf63 Gene

mRNA expression in normal human tissues for C11orf63 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for C11orf63 Gene

This gene is overexpressed in Testis (8.0).

SOURCE GeneReport for Unigene cluster for C11orf63 Gene Hs.164705

genes like me logo Genes that share expressions with C11orf63: view

Orthologs for C11orf63 Gene

This gene was present in the common ancestor of chordates.

Orthologs for C11orf63 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C11orf63 37
  • 98 (a)
OneToOne
LOC451628 36
  • 99.08 (n)
  • 97.58 (a)
cow
(Bos Taurus)
Mammalia C11orf63 37
  • 65 (a)
OneToOne
C15H11orf63 36
  • 82.4 (n)
  • 73.8 (a)
dog
(Canis familiaris)
Mammalia C11orf63 37
  • 74 (a)
OneToOne
C5H11orf63 36
  • 84.02 (n)
  • 74.55 (a)
mouse
(Mus musculus)
Mammalia 4931429I11Rik 36
  • 75.71 (n)
  • 68.06 (a)
4931429I11Rik 16
4931429I11Rik 37
  • 67 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C11orf63 37
  • 51 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C11orf63 37
  • 47 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1309108 36
  • 74.15 (n)
  • 66.53 (a)
chicken
(Gallus gallus)
Aves C11orf63 37
  • 33 (a)
OneToOne
C24H11orf63 36
  • 55.27 (n)
  • 43.29 (a)
lizard
(Anolis carolinensis)
Reptilia C11orf63 37
  • 31 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii C10H11orf63 37
  • 26 (a)
OneToOne
Species with no ortholog for C11orf63:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C11orf63 Gene

ENSEMBL:
Gene Tree for C11orf63 (if available)
TreeFam:
Gene Tree for C11orf63 (if available)

Paralogs for C11orf63 Gene

No data available for Paralogs for C11orf63 Gene

Variants for C11orf63 Gene

Sequence variations from dbSNP and Humsavar for C11orf63 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs1057703 -- 122,959,543(+) CCTAT(G/T)ATTAT utr-variant-3-prime, downstream-variant-500B
rs1057704 -- 122,959,566(+) GTCCA(C/T)GTTTG utr-variant-3-prime, downstream-variant-500B
rs1343784 -- 122,923,172(-) CTAAC(G/T)CCTTC intron-variant
rs1461505 -- 122,951,300(+) CAAAC(A/G)GTATA intron-variant
rs1879886 -- 122,909,694(+) GAATC(A/G)TTTGA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C11orf63 Gene

Variant ID Type Subtype PubMed ID
nsv898433 CNV Gain 21882294
nsv520988 CNV Gain 19592680
esv2661962 CNV Deletion 23128226
nsv510278 CNV Loss 20534489
nsv522969 CNV Loss 19592680

Relevant External Links for C11orf63 Gene

HapMap Linkage Disequilibrium report
C11orf63

Disorders for C11orf63 Gene

Relevant External Links for C11orf63

Human Genome Epidemiology (HuGE) Navigator
C11orf63
genes like me logo Genes that share disorders with C11orf63: view

No data available for UniProtKB/Swiss-Prot for C11orf63 Gene

Publications for C11orf63 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Comparison of substrate specificity of the ubiquitin ligases Nedd4 and Nedd4-2 using proteome arrays. (PMID: 19953087) Persaud A. … Rotin D. (Mol. Syst. Biol. 2009) 3
  5. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3

Products for C11orf63 Gene

Sources for C11orf63 Gene

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