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Aliases for C11orf44 Gene

Aliases for C11orf44 Gene

  • Chromosome 11 Open Reading Frame 44 2 3

External Ids for C11orf44 Gene

Summaries for C11orf44 Gene

GeneCards Summary for C11orf44 Gene

C11orf44 (Chromosome 11 Open Reading Frame 44) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C11orf44 Gene

Genomics for C11orf44 Gene

Genomic Location for C11orf44 Gene

Start:
130,672,956 bp from pter
End:
130,717,352 bp from pter
Size:
44,397 bases
Orientation:
Plus strand

Genomic View for C11orf44 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C11orf44 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C11orf44 Gene

Regulatory Elements for C11orf44 Gene

Proteins for C11orf44 Gene

  • Protein details for C11orf44 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N8P7-CK044_HUMAN
    Recommended name:
    Uncharacterized protein C11orf44
    Protein Accession:
    Q8N8P7
    Secondary Accessions:

    Protein attributes for C11orf44 Gene

    Size:
    122 amino acids
    Molecular mass:
    13691 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C11orf44 Gene

Proteomics data for C11orf44 Gene at MOPED

Post-translational modifications for C11orf44 Gene

No Post-translational modifications

Other Protein References for C11orf44 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C11orf44 Gene

Domains for C11orf44 Gene

Protein Domains for C11orf44 Gene

ProtoNet:
genes like me logo Genes that share domains with C11orf44: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C11orf44 Gene

Function for C11orf44 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C11orf44 Gene

Localization for C11orf44 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C11orf44 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C11orf44 Gene COMPARTMENTS Subcellular localization image for C11orf44 gene
Compartment Confidence
extracellular 3

Gene Ontology (GO) - Cellular Components for C11orf44 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with C11orf44: view

Pathways for C11orf44 Gene

SuperPathways for C11orf44 Gene

No Data Available

Interacting Proteins for C11orf44 Gene

Gene Ontology (GO) - Biological Process for C11orf44 Gene

None

No data available for Pathways by source for C11orf44 Gene

Transcripts for C11orf44 Gene

mRNA/cDNA for C11orf44 Gene

(1) REFSEQ mRNAs :
(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C11orf44 Gene

Chromosome 11 open reading frame 44:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C11orf44 Gene

No ASD Table

Relevant External Links for C11orf44 Gene

GeneLoc Exon Structure for
C11orf44
ECgene alternative splicing isoforms for
C11orf44

Expression for C11orf44 Gene

mRNA expression in normal human tissues for C11orf44 Gene

SOURCE GeneReport for Unigene cluster for C11orf44 Gene Hs.376151

genes like me logo Genes that share expressions with C11orf44: view

Orthologs for C11orf44 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for C11orf44 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C11orf44 37
  • 98 (a)
OneToOne
LOC100611626 36
  • 98.63 (n)
  • 98.36 (a)
Species with no ortholog for C11orf44:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C11orf44 Gene

ENSEMBL:
Gene Tree for C11orf44 (if available)
TreeFam:
Gene Tree for C11orf44 (if available)

Paralogs for C11orf44 Gene

No data available for Paralogs for C11orf44 Gene

Variants for C11orf44 Gene

Sequence variations from dbSNP and Humsavar for C11orf44 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs2951954 -- 130,673,778(+) AGGGC(A/G)TGTTG intron-variant
rs2951955 -- 130,674,977(+) AGGCC(G/T)TTTTC intron-variant
rs4245091 -- 130,702,923(+) GGAGC(A/G)TGACA intron-variant
rs4278518 -- 130,705,339(+) ctctc(C/T)tagct intron-variant
rs4317990 -- 130,702,635(+) GAGAA(C/T)GTAGA intron-variant

Relevant External Links for C11orf44 Gene

HapMap Linkage Disequilibrium report
C11orf44

No data available for Structural Variations from Database of Genomic Variants (DGV) for C11orf44 Gene

Disorders for C11orf44 Gene

Relevant External Links for C11orf44

Genetic Association Database (GAD)
C11orf44
genes like me logo Genes that share disorders with C11orf44: view

No data available for UniProtKB/Swiss-Prot for C11orf44 Gene

Publications for C11orf44 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3

Products for C11orf44 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate C11orf44
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for C11orf44
    • Block miRNA regulation of C11orf44 using miScript Target Protectors

    Sources for C11orf44 Gene

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