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Aliases for C10orf76 Gene

Aliases for C10orf76 Gene

  • Chromosome 10 Open Reading Frame 76 2 3

External Ids for C10orf76 Gene

Previous GeneCards Identifiers for C10orf76 Gene

  • GC10M103270
  • GC10M103595
  • GC10M097236

Summaries for C10orf76 Gene

GeneCards Summary for C10orf76 Gene

C10orf76 (Chromosome 10 Open Reading Frame 76) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C10orf76 Gene

Genomics for C10orf76 Gene

Regulatory Elements for C10orf76 Gene

Genomic Location for C10orf76 Gene

Start:
101,845,599 bp from pter
End:
102,056,193 bp from pter
Size:
210,595 bases
Orientation:
Minus strand

Genomic View for C10orf76 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C10orf76 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C10orf76 Gene

Proteins for C10orf76 Gene

  • Protein details for C10orf76 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5T2E6-CJ076_HUMAN
    Recommended name:
    UPF0668 protein C10orf76
    Protein Accession:
    Q5T2E6
    Secondary Accessions:
    • Q2TB87
    • Q9H8Z9

    Protein attributes for C10orf76 Gene

    Size:
    689 amino acids
    Molecular mass:
    78710 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for C10orf76 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C10orf76 Gene

Proteomics data for C10orf76 Gene at MOPED

Post-translational modifications for C10orf76 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C10orf76 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C10orf76 Gene

Domains for C10orf76 Gene

Protein Domains for C10orf76 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for C10orf76 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q5T2E6

UniProtKB/Swiss-Prot:

CJ076_HUMAN :
  • Q5T2E6
Family:
  • Belongs to the UPF0668 family.
genes like me logo Genes that share domains with C10orf76: view

No data available for Gene Families for C10orf76 Gene

Function for C10orf76 Gene

Gene Ontology (GO) - Molecular Function for C10orf76 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005488 binding --
genes like me logo Genes that share ontologies with C10orf76: view

Phenotypes for C10orf76 Gene

MGI mutant phenotypes for C10orf76:
inferred from 1 alleles
genes like me logo Genes that share phenotypes with C10orf76: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C10orf76 Gene

Localization for C10orf76 Gene

Subcellular locations from UniProtKB/Swiss-Prot for C10orf76 Gene

Membrane; Single-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C10orf76 Gene COMPARTMENTS Subcellular localization image for C10orf76 gene
Compartment Confidence
plasma membrane 3
nucleus 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for C10orf76 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with C10orf76: view

Pathways for C10orf76 Gene

SuperPathways for C10orf76 Gene

No Data Available

Interacting Proteins for C10orf76 Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000359050%0d%0a9606.ENSP00000344818%0d%0a
Selected Interacting proteins: ENSP00000359050 for C10orf76 Gene via STRING

Symbol External ID(s) Details
UBC

Gene Ontology (GO) - Biological Process for C10orf76 Gene

None

No data available for Pathways by source for C10orf76 Gene

Transcripts for C10orf76 Gene

Unigene Clusters for C10orf76 Gene

Chromosome 10 open reading frame 76:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C10orf76 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b · 6c ^ 7a · 7b ^ 8 ^ 9 ^ 10a · 10b · 10c · 10d · 10e
SP1: - - - -
SP2:
SP3: - -
SP4:
SP5: - - -

Relevant External Links for C10orf76 Gene

GeneLoc Exon Structure for
C10orf76
ECgene alternative splicing isoforms for
C10orf76

Expression for C10orf76 Gene

mRNA expression in normal human tissues for C10orf76 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for C10orf76 Gene

SOURCE GeneReport for Unigene cluster for C10orf76 Gene Hs.16004

genes like me logo Genes that share expressions with C10orf76: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for C10orf76 Gene

Orthologs for C10orf76 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for C10orf76 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C10H10orf76 35
  • 99.9 (n)
  • 100 (a)
C10orf76 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C10orf76 36
  • 100 (a)
OneToOne
C26H10orf76 35
  • 95.21 (n)
  • 99.71 (a)
dog
(Canis familiaris)
Mammalia C10orf76 36
  • 100 (a)
OneToOne
C28H10orf76 35
  • 94.82 (n)
  • 99.71 (a)
mouse
(Mus musculus)
Mammalia 9130011E15Rik 35
  • 91.39 (n)
  • 98.55 (a)
9130011E15Rik 16
9130011E15Rik 36
  • 99 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia C10orf76 36
  • 99 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia C10orf76 36
  • 93 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia RGD1564887 35
  • 91.39 (n)
  • 98.26 (a)
chicken
(Gallus gallus)
Aves C10orf76 36
  • 96 (a)
OneToOne
C6H10ORF76 35
  • 82.54 (n)
  • 96.37 (a)
lizard
(Anolis carolinensis)
Reptilia C10orf76 36
  • 95 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.32918 35
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100488528 35
  • 79.25 (n)
  • 91.44 (a)
Str.10588 35
zebrafish
(Danio rerio)
Actinopterygii C22H10orf76 (1 of 2) 36
  • 85 (a)
OneToMany
C22H10orf76 (2 of 2) 36
  • 82 (a)
OneToMany
zgc63733 35
zgc:63733 35
  • 74.94 (n)
  • 85.05 (a)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP012485 35
  • 50.43 (n)
  • 44.24 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG8379 35
  • 55.59 (n)
  • 49.54 (a)
CG8379 36
  • 46 (a)
OneToOne
bread mold
(Neurospora crassa)
Ascomycetes NCU08708 35
  • 42.72 (n)
  • 29.34 (a)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes SPBC20F10.02c 35
  • 38.32 (n)
  • 23.93 (a)
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 52 (a)
OneToOne
Species with no ortholog for C10orf76:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for C10orf76 Gene

ENSEMBL:
Gene Tree for C10orf76 (if available)
TreeFam:
Gene Tree for C10orf76 (if available)

Paralogs for C10orf76 Gene

No data available for Paralogs for C10orf76 Gene

Variants for C10orf76 Gene

Sequence variations from dbSNP and Humsavar for C10orf76 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs1364 -- 102,039,718(-) AAGAA(A/G)GACTT intron-variant
rs727314 -- 101,920,154(-) GGCTG(A/T)GAGCT intron-variant
rs935446 -- 101,849,103(+) GGGAA(A/G)TGGGT intron-variant
rs1044258 -- 101,845,957(-) GGAGC(A/G)AACAG utr-variant-3-prime
rs1374473 -- 101,921,004(-) acaac(C/T)cccca intron-variant

Structural Variations from Database of Genomic Variants (DGV) for C10orf76 Gene

Variant ID Type Subtype PubMed ID
nsv513016 CNV Insertion 21212237
esv1400220 CNV Insertion 17803354
esv270180 CNV Insertion 20981092
esv273373 CNV Insertion 20981092
nsv895968 CNV Loss 21882294
nsv895969 CNV Loss 21882294

Relevant External Links for C10orf76 Gene

HapMap Linkage Disequilibrium report
C10orf76

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for C10orf76 Gene

Disorders for C10orf76 Gene

Relevant External Links for C10orf76

Human Genome Epidemiology (HuGE) Navigator
C10orf76
genes like me logo Genes that share disorders with C10orf76: view

No data available for UniProtKB/Swiss-Prot for C10orf76 Gene

Publications for C10orf76 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 2 3 4
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease. (PMID: 16385451) Grupe A. … Goate A. (Am. J. Hum. Genet. 2006) 3
  4. Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. (PMID: 21139048) Danielsen J.M. … Nielsen M.L. (Mol. Cell Proteomics 2011) 3
  5. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PMID: 21906983) Kim W. … Gygi S.P. (Mol. Cell 2011) 3

Products for C10orf76 Gene

Sources for C10orf76 Gene

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