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Aliases &
Descriptions
for PYROXD2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
About This Section
|
| Aliases |
|---|
| C10orf33 2, 3 | | EC 1.-.-.- 3 | | FLJ12197 2 | | FLJ23849 1, 2 | | FP3420 2 | | MGC13047 2 | | OTTHUMP00000020249 2 |
| | | Descriptions |
|---|
| chromosome 10 open reading frame 33 1 | | pyridine nucleotide-disulphide oxidoreductase domain 2 2 |
|
| |
Search outside databases for aliases for PYROXD2 gene |
Summaries
for PYROXD2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: PYRD2_HUMAN, Q8N2H3Function: Probable oxidoreductase (By similarity) |
Genomic Location
for PYROXD2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences)
About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 10q24.2 Ensembl cytogenetic band: 10q24.2 HGNC cytogenetic band: 10q24.2PYROXD2 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 10 GeneLoc Exon Structure GeneLoc location for GC10M100134:
(about GC identifiers)
Start:
|
100,133,314 bp from pter |
End:
|
100,164,931 bp from pter |
Size:
|
31,618 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000010.9 NT_030059.12
| Proteins
for PYROXD2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: PYRD2_HUMAN, Q8N2H3 (See
protein sequence)Recommended Name: Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 Size: 581 amino acids; 63068 Da
Secondary accessions: Q5TAA9 Q9BRQ1REFSEQ proteins: NP_116098.2
ENSEMBL proteins: ENSP00000359607
Human Recombinant Proteins  Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
Antibodies for PYROXD2:
Assays for PYROXD2: | Protein
Domains/
Families
for PYROXD2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q8N2H3
ProtoNet protein and cluster: Q8N2H3 UniProtKB/Swiss-Prot: PYRD2_HUMAN, Q8N2H3Similarity: Belongs to the carotenoid/retinoid oxidoreductase family | Gene Function
for PYROXD2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| OriGene 29mer shRNA kit in GFP-retroviral vector: NM_032709
 Applied Biosystems Silencer® siRNAs for PYROXD2
 Sigma-Aldrich siRNA for PYROXD2
Sigma-Aldrich shRNA for PYROXD2
Explore Sigma-Aldrich super-pooled esiRNAs
OriGene GFP tagged cDNA clone in CMV expression vector: NM_032709
Myc/DDK tagged cDNA clone in CMV expression vector: NM_032709
untagged cDNA clone in CMV expression vector: NM_032709
Primers:  Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
OriGene genome-wide validated SYBR primer pairs: NM_032709
UniProtKB/Swiss-Prot: PYRD2_HUMAN, Q8N2H3Function: Probable oxidoreductase (By similarity)Enzyme Number (IUBMB): EC 1.-.-.- 1 Gene Ontology (GO) molecular function term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0016491 | oxidoreductase activity |
IEA | -- |
About this table | Pathways & Interactions
for PYROXD2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
--1 Gene Ontology (GO) biological process term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0055114 | oxidation reduction |
IEA | -- |
About this table
|
Drugs & Compounds
for PYROXD2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for PYROXD2
|
Transcripts
for PYROXD2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene,
Expression Assays from Applied Biosystems)
About This Section
| OriGene 29mer shRNA kit in GFP-retroviral vector: NM_032709
Sigma-Aldrich siRNA for PYROXD2
Sigma-Aldrich shRNA for PYROXD2
Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer® siRNAs: NM_032709 REFSEQ mRNAs for PYROXD2 gene: NM_032709.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_032709
OriGene GFP tagged cDNA clone in CMV expression vector: NM_032709
Myc/DDK tagged cDNA clone in CMV expression vector: NM_032709
untagged cDNA clone in CMV expression vector: NM_032709
Additional cDNA sequence: AK022259.1 AK074429.1 AK075265.1 AK123713.1 AK225637.1 AK295699.1 BC006131.1 BC035712.1 BC050574.1 CR597626.1 CR620799.1 10 DOTS entries: DT.410149 DT.97839792 DT.100758181 DT.40131826 DT.101982390 DT.121290374 DT.100019759 DT.100662346 DT.101979638 DT.424805 24/218 AceView cDNA sequences (see all 218
):CR593063 BE048783 CR625584 CD673355 BM758873 BX282181 BG388727 BC035712 CR620028 BU629693 CA488995 BC000175 BX451587 AI219272 BE747083 BU196145 AW674329 BX092521 AA649872 BG757528 AW675059 NM_182639 Z40097 NM_182637 Unigene Cluster for PYROXD2: Pyridine nucleotide-disulphide oxidoreductase domain 2 Hs.238303 [show with all ESTs]Unigene Representative Sequence: BC050574
GeneLoc Exon Structure
5 Alternative Splicing Database (ASD) splice patterns (SP) for PYROXD2
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3 | ^ | 4a | · | 4b | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11a | · | 11b | ^ | 12a | · | 12b | ^ | 13a | · | 13b | ^ | 14 | ^ | 15 | ^ | 16a | · | 16b | ^ | 17a | · | 17b |
|---|
|
| SP1: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - | | | | | | - | | | | | | - | | | | | | | | |
| SP2: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - | | | | | | | | | | | | | | |
| SP3: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - | | | | | | | | | | | | | | | | | | | | |
| SP4: | | | | | - | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SP5: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
About this scheme
ECgene alternative splicing isoforms for PYROXD2
1 Ensembl transcript including schematic representation: ENST00000370575
|
Expression
for PYROXD2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| PYROXD2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for PYROXD2
1 / 2 7 probe-sets matching PYROXD2 gene Data from
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: GACTGGTTCT
SOURCE GeneReport for Unigene cluster: Hs.238303
|
Orthologs
for PYROXD2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for PYROXD2 gene from 5/10 species (see all 10
)
About this table Species with no ortholog for PYROXD2
ENSEMBL Gene Tree for PYROXD2 | Paralogs
for PYROXD2(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| -- |
SNPs/Variants
for PYROXD2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for PYROXD2 (up to first 250kb)
|
Disorders & Mutations
for PYROXD2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
| -- |
Medical News
for PYROXD2(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for PYROXD2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 6 PubMed articles for PYROXD2 gene: |
Search for PYROXD2
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing PYROXD2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing PYROXD2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing PYROXD2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| About This Section
| --
| Services
for PYROXD2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section
| 
Products for PYROXD2:
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| | |  | Search Tocris compounds for PYROXD2 |
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