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Aliases for C10orf142 Gene

Aliases for C10orf142 Gene

  • Chromosome 10 Open Reading Frame 142 2 3 5

External Ids for C10orf142 Gene

Summaries for C10orf142 Gene

GeneCards Summary for C10orf142 Gene

C10orf142 (Chromosome 10 Open Reading Frame 142) is a Protein Coding gene.

Additional gene information for C10orf142 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C10orf142 Gene

Genomics for C10orf142 Gene

Regulatory Elements for C10orf142 Gene

Enhancers for C10orf142 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H044280 0.4 ENCODE 0.4 -11.5 -11543 1 MNT FOXP2 CXCL12 C10orf142 ENSG00000237590
GH10H044279 0.4 ENCODE 0.4 -13.3 -13322 0 JUND C10orf142 ENSG00000237590
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around C10orf142 on UCSC Golden Path with GeneCards custom track

Genomic Location for C10orf142 Gene

Chromosome:
10
Start:
44,292,569 bp from pter
End:
44,294,649 bp from pter
Size:
2,081 bases
Orientation:
Plus strand

Genomic View for C10orf142 Gene

Genes around C10orf142 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
C10orf142 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for C10orf142 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C10orf142 Gene

Proteins for C10orf142 Gene

  • Protein details for C10orf142 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    B7Z368-CJ142_HUMAN
    Recommended name:
    Uncharacterized protein C10orf142
    Protein Accession:
    B7Z368

    Protein attributes for C10orf142 Gene

    Size:
    130 amino acids
    Molecular mass:
    13757 Da
    Quaternary structure:
    No Data Available

neXtProt entry for C10orf142 Gene

Post-translational modifications for C10orf142 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for C10orf142 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C10orf142 Gene

Domains & Families for C10orf142 Gene

Gene Families for C10orf142 Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for C10orf142 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with C10orf142: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for C10orf142 Gene

Function for C10orf142 Gene

Phenotypes From GWAS Catalog for C10orf142 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for C10orf142 Gene

Localization for C10orf142 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for C10orf142 Gene

Pathways & Interactions for C10orf142 Gene

SuperPathways for C10orf142 Gene

No Data Available

Interacting Proteins for C10orf142 Gene

Gene Ontology (GO) - Biological Process for C10orf142 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for C10orf142 Gene

Drugs & Compounds for C10orf142 Gene

No Compound Related Data Available

Transcripts for C10orf142 Gene

mRNA/cDNA for C10orf142 Gene

(1) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for C10orf142 Gene

No ASD Table

Relevant External Links for C10orf142 Gene

GeneLoc Exon Structure for
C10orf142
ECgene alternative splicing isoforms for
C10orf142

Expression for C10orf142 Gene

NURSA nuclear receptor signaling pathways regulating expression of C10orf142 Gene:

C10orf142
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for C10orf142 Gene

Orthologs for C10orf142 Gene

Evolution for C10orf142 Gene

ENSEMBL:
Gene Tree for C10orf142 (if available)
TreeFam:
Gene Tree for C10orf142 (if available)

No data available for Orthologs for C10orf142 Gene

Paralogs for C10orf142 Gene

Pseudogenes.org Pseudogenes for C10orf142 Gene

genes like me logo Genes that share paralogs with C10orf142: view

No data available for Paralogs for C10orf142 Gene

Variants for C10orf142 Gene

Sequence variations from dbSNP and Humsavar for C10orf142 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000221928 -- 44,293,659(+) ACTGC(A/G)AGGTC intron-variant, nc-transcript-variant
rs1000678768 -- 44,293,481(+) GGCTG(C/G)AGAGA nc-transcript-variant, reference, missense
rs1003489199 -- 44,291,117(+) AATCC(A/T)GGAAA upstream-variant-2KB
rs1003852543 -- 44,294,746(+) CTTGT(C/G)GTGGG intron-variant, nc-transcript-variant, downstream-variant-500B
rs1004414969 -- 44,293,990(+) ATTGC(C/T)CTGGG intron-variant, nc-transcript-variant, utr-variant-3-prime

Relevant External Links for C10orf142 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
C10orf142

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for C10orf142 Gene

Disorders for C10orf142 Gene

Relevant External Links for C10orf142

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
C10orf142

No disorders were found for C10orf142 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for C10orf142 Gene

Publications for C10orf142 Gene

  1. Genomewide association analysis of coronary artery disease. (PMID: 17634449) Samani NJ … WTCCC and the Cardiogenics Consortium (The New England journal of medicine 2007) 3 60
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 4 60
  3. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P … Rogers J (Nature 2004) 4 60

Products for C10orf142 Gene

Sources for C10orf142 Gene

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