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Aliases &
Descriptions
for C10orf129
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
About This Section
|
| Aliases |
|---|
| EC 6.2.1.2 3 | | OTTHUMP00000059410 2 | | bA310E22.3 1, 2 |
| | | Descriptions |
|---|
| AMP-binding enzyme 2 | | acyl-coenzyme A synthetase ACSM6, mitochondrial 2 | | chromosome 10 open reading frame 129 2 |
|
| |
Search outside databases for aliases for C10orf129 genePrevious GC identifer: GC10P096618 |
Summaries
for C10orf129(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| -- |
Genomic Location
for C10orf129
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences)
About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
 Transcription factor binding sites upstream to the C10orf129 gene 
Entrez Gene cytogenetic band: 10q23.33 Ensembl cytogenetic band: 10q23.33 HGNC chromosome: 10C10orf129 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 10 GeneLoc Exon Structure GeneLoc location for GC10P096943:
(about GC identifiers)
Start:
|
96,943,947 bp from pter |
End:
|
96,978,671 bp from pter |
Size:
|
34,725 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000010.9 NT_030059.12
| Proteins
for C10orf129
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: ACSM6_HUMAN, Q6P461 (See
protein sequence)Recommended Name: Acyl-coenzyme A synthetase ACSM6, mitochondrial precursor Size: 480 amino acids; 53497 Da
Cofactor: Magnesium (By similarity)
Subunit: Monomer (By similarity)
Subcellular location: Mitochondrion (Potential)
Sequence caution: Sequence=CAH72344.1; Type=Erroneous gene model prediction;
Secondary accessions: A4FU95 A4IF38 Q5VZX2 Q6ZTX1Alternative splicing: 3 isoforms: Q6P461-1 Q6P461-2 Q6P461-3 REFSEQ proteins: NP_997204.2
ENSEMBL proteins: ENSP00000340296 ENSP00000377573 ENSP00000328491 ENSP00000384922
Human Recombinant Proteins  Browse Origene for full length recombinant human proteins expressed in human HEK293 cells
1 Gene Ontology (GO) cellular component term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005739 | mitochondrion |
IEA | -- |
About this table
Antibodies for C10orf129:
Assays for C10orf129: | Protein
Domains/
Families
for C10orf129(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q6P461
ProtoNet protein and cluster: Q6P461 1 Blocks protein family: IPB000873 AMP-binding signature
UniProtKB/Swiss-Prot: ACSM6_HUMAN, Q6P461Similarity: Belongs to the ATP-dependent AMP-binding enzyme family | Gene Function
for C10orf129
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_207321
 Applied Biosystems Silencer® siRNAs for C10orf129
 Sigma-Aldrich siRNA for C10orf129
Sigma-Aldrich shRNA for C10orf129
Explore Sigma-Aldrich super-pooled esiRNAs
OriGene GFP tagged cDNA clone in CMV expression vector: NM_207321
Myc/DDK tagged cDNA clone in CMV expression vector: NM_207321
untagged cDNA clone in CMV expression vector: NM_207321
Primers:  Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
OriGene genome-wide validated SYBR primer pairs: NM_207321
UniProtKB/Swiss-Prot: ACSM6_HUMAN, Q6P461Catalytic activity: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoACatalytic activity: GTP + lipoate = diphosphate + lipoyl-GMPEnzyme Number (IUBMB): EC 6.2.1.2 5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6
): About this table | Pathways & Interactions
for C10orf129
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
--3 Gene Ontology (GO) biological process terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0006629 | lipid metabolic process |
IEA | -- | | GO:0006631 | fatty acid metabolic process |
IEA | -- | | GO:0008152 | metabolic process |
IEA | -- |
About this table
|
Drugs & Compounds
for C10orf129(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for C10orf129
|
Transcripts
for C10orf129(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene,
Expression Assays from Applied Biosystems)
About This Section
| OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_207321
Sigma-Aldrich siRNA for C10orf129
Sigma-Aldrich shRNA for C10orf129
Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer® siRNAs: NM_207321 REFSEQ mRNAs for C10orf129 gene: NM_207321.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_207321
OriGene GFP tagged cDNA clone in CMV expression vector: NM_207321
Myc/DDK tagged cDNA clone in CMV expression vector: NM_207321
untagged cDNA clone in CMV expression vector: NM_207321
Additional cDNA sequence: AK126134.1 BC063654.1 BC104210.1 BC104211.2 BC112988.1 BC148184.1 2 DOTS entries: DT.91847749 DT.101958735 7 AceView cDNA sequences:NM_207321 BC063654 AK126134 BX105341 BG698484 AI080692 AI190959
 highest scoring ESTs for C10orf129:AI190959 AI080692 AK126134 BC063654 BG698484 BX105341 NM_207321 BC104210 BC104211 AA437096 Unigene Cluster for C10orf129: Chromosome 10 open reading frame 129 Hs.134229 [show with all ESTs]Unigene Representative Sequence: AK126134
GeneLoc Exon Structure
3 Alternative Splicing Database (ASD) splice patterns (SP) for C10orf129
| ExUns: | 1 | ^ | 2a | · | 2b | ^ | 3a | · | 3b | ^ | 4a | · | 4b | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10a | · | 10b | · | 10c | ^ | 11 |
|---|
|
| SP1: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SP2: | | | | | | | | | - | | | | | | | | | | | | - | | | | | | | | | | | | |
| SP3: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - | | | |
About this scheme
ECgene alternative splicing isoforms for C10orf129
4 Ensembl transcripts including schematic representations: ENST00000341686
ENST00000394005
ENST00000327739
ENST00000404473
|
Expression
for C10orf129
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| C10orf129 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for C10orf129
1 / 2 / 3 1 probe-set matching C10orf129 gene Data from
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: CTTTACCTCA
SOURCE GeneReport for Unigene cluster: Hs.134229
|
Orthologs
for C10orf129
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
| ENSEMBL Gene Tree for C10orf129 | Paralogs
for C10orf129(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| Paralogs for C10orf129 gene
- ACSM12 ACSM42 ACSM52 ACSM32 ACSM2B2 ACSM2A2
|
SNPs/Variants
for C10orf129(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for C10orf129 (up to first 250kb)
|
Disorders & Mutations
for C10orf129
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
| -- |
Medical News
for C10orf129(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for C10orf129 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 4 PubMed articles for C10orf129 gene: |
Search for C10orf129
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing C10orf129
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing C10orf129
(According to HUGE)
About This Section
| -- |
Specialized Databases showing C10orf129(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| About This Section
| --
| Services
for C10orf129(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section
| 
Products for C10orf129:
|
GeneCards Homepage - Last full update: 1 Jul 2009
Incremental update: 13 Oct 2009
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