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Aliases for C10orf113 Gene

Aliases for C10orf113 Gene

  • Chromosome 10 Open Reading Frame 113 2 3
  • Putative Uncharacterized Protein C10orf113 3
  • BA165O3.1 3

External Ids for C10orf113 Gene

Summaries for C10orf113 Gene

GeneCards Summary for C10orf113 Gene

C10orf113 (Chromosome 10 Open Reading Frame 113) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for C10orf113 Gene

Genomics for C10orf113 Gene

Genomic Location for C10orf113 Gene

Start:
21,125,763 bp from pter
End:
21,146,559 bp from pter
Size:
20,797 bases
Orientation:
Minus strand

Genomic View for C10orf113 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for C10orf113 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for C10orf113 Gene

Regulatory Elements for C10orf113 Gene

Proteins for C10orf113 Gene

  • Protein details for C10orf113 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5VZT2-CJ113_HUMAN
    Recommended name:
    Putative uncharacterized protein C10orf113
    Protein Accession:
    Q5VZT2
    Secondary Accessions:
    • B9EIM9
    • E9PRX7

    Protein attributes for C10orf113 Gene

    Size:
    155 amino acids
    Molecular mass:
    17689 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAI40745.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=CAH70812.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Alternative splice isoforms for C10orf113 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for C10orf113 Gene

Proteomics data for C10orf113 Gene at MOPED

Post-translational modifications for C10orf113 Gene

No Post-translational modifications

Other Protein References for C10orf113 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for C10orf113 Gene

Domains for C10orf113 Gene

Protein Domains for C10orf113 Gene

ProtoNet:
genes like me logo Genes that share domains with C10orf113: view

No data available for Gene Families and UniProtKB/Swiss-Prot for C10orf113 Gene

Function for C10orf113 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for C10orf113 Gene

Localization for C10orf113 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for C10orf113 Gene COMPARTMENTS Subcellular localization image for C10orf113 gene
Compartment Confidence
cytosol 2
nucleus 2
extracellular 1
golgi apparatus 1
mitochondrion 1

No data available for Gene Ontology (GO) - Cellular Components for C10orf113 Gene

Pathways for C10orf113 Gene

SuperPathways for C10orf113 Gene

No Data Available

Interacting Proteins for C10orf113 Gene

Gene Ontology (GO) - Biological Process for C10orf113 Gene

None

No data available for Pathways by source for C10orf113 Gene

Transcripts for C10orf113 Gene

mRNA/cDNA for C10orf113 Gene

(4) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for C10orf113 Gene

Chromosome 10 open reading frame 113:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for C10orf113 Gene

No ASD Table

Relevant External Links for C10orf113 Gene

GeneLoc Exon Structure for
C10orf113
ECgene alternative splicing isoforms for
C10orf113

Expression for C10orf113 Gene

mRNA expression in normal human tissues for C10orf113 Gene

mRNA differential expression in normal tissues according to GTEx for C10orf113 Gene

This gene is overexpressed in Testis (11.3) and Skin - Not Sun Exposed (Suprapubic) (4.5).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for C10orf113 Gene

SOURCE GeneReport for Unigene cluster for C10orf113 Gene Hs.664110

genes like me logo Genes that share expressions with C10orf113: view

Orthologs for C10orf113 Gene

This gene was present in the common ancestor of mammals.

Orthologs for C10orf113 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C10H10orf113 36
  • 99.14 (n)
  • 97.42 (a)
C10orf113 37
  • 97 (a)
OneToOne
cow
(Bos Taurus)
Mammalia C13H10orf113 36
  • 79.22 (n)
  • 62.75 (a)
dog
(Canis familiaris)
Mammalia C2H10orf113 36
  • 87.5 (n)
  • 77.5 (a)
Species with no ortholog for C10orf113:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for C10orf113 Gene

ENSEMBL:
Gene Tree for C10orf113 (if available)
TreeFam:
Gene Tree for C10orf113 (if available)

Paralogs for C10orf113 Gene

No data available for Paralogs for C10orf113 Gene

Variants for C10orf113 Gene

Sequence variations from dbSNP and Humsavar for C10orf113 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
VAR_028801 -
VAR_050858 -

Structural Variations from Database of Genomic Variants (DGV) for C10orf113 Gene

Variant ID Type Subtype PubMed ID
nsv831806 CNV Gain 17160897

Relevant External Links for C10orf113 Gene

HapMap Linkage Disequilibrium report
C10orf113

Disorders for C10orf113 Gene

Relevant External Links for C10orf113

Genetic Association Database (GAD)
C10orf113
genes like me logo Genes that share disorders with C10orf113: view

No data available for UniProtKB/Swiss-Prot for C10orf113 Gene

Publications for C10orf113 Gene

  1. The DNA sequence and comparative analysis of human chromosome 10. (PMID: 15164054) Deloukas P. … Rogers J. (Nature 2004) 3 4
  2. GWAS meta-analysis and replication identifies three new susceptibility loci for ovarian cancer. (PMID: 23535730) Pharoah P.D. … Sellers T.A. (Nat. Genet. 2013) 3
  3. A genome wide association study (GWAS) providing evidence of an association between common genetic variants and late radiotherapy toxicity. (PMID: 24785509) Barnett G.C. … West C.M. (Radiother Oncol 2014) 3
  4. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for C10orf113 Gene

Sources for C10orf113 Gene

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