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Aliases for BTNL9 Gene

Aliases for BTNL9 Gene

  • Butyrophilin-Like 9 2 3
  • Butyrophilin-Like Protein 9 3
  • Butyrophilin 3 3
  • VDLS1900 3
  • BTN3 3
  • BTN8 3

External Ids for BTNL9 Gene

Summaries for BTNL9 Gene

GeneCards Summary for BTNL9 Gene

BTNL9 (Butyrophilin-Like 9) is a Protein Coding gene. An important paralog of this gene is BTNL8.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BTNL9 Gene

Genomics for BTNL9 Gene

Genomic Location for BTNL9 Gene

Start:
181,040,205 bp from pter
End:
181,061,523 bp from pter
Size:
21,319 bases
Orientation:
Plus strand

Genomic View for BTNL9 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BTNL9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTNL9 Gene

No data available for Regulatory Elements for BTNL9 Gene

Proteins for BTNL9 Gene

  • Protein details for BTNL9 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6UXG8-BTNL9_HUMAN
    Recommended name:
    Butyrophilin-like protein 9
    Protein Accession:
    Q6UXG8
    Secondary Accessions:
    • A6NL42
    • Q6P660
    • Q96DM5

    Protein attributes for BTNL9 Gene

    Size:
    535 amino acids
    Molecular mass:
    59716 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for BTNL9 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for BTNL9 Gene

Proteomics data for BTNL9 Gene at MOPED

Post-translational modifications for BTNL9 Gene

  • Modification sites at PhosphoSitePlus
  • Glycosylation at Asn102, Asn139, and Asn224

Other Protein References for BTNL9 Gene

No data available for DME Specific Peptides for BTNL9 Gene

Domains for BTNL9 Gene

Gene Families for BTNL9 Gene

HGNC:
  • VSET :Immunoglobulin superfamily / V-set domain containing
  • BTN :Butyrophilins

UniProtKB/Swiss-Prot:

BTNL9_HUMAN
Domain:
  • Contains 1 B30.2/SPRY domain.:
    • Q6UXG8
  • Contains 1 Ig-like V-type (immunoglobulin-like) domain.:
    • Q6UXG8
Family:
  • Belongs to the immunoglobulin superfamily. BTN/MOG family.:
    • Q6UXG8
genes like me logo Genes that share domains with BTNL9: view

Function for BTNL9 Gene

Gene Ontology (GO) - Molecular Function for BTNL9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with BTNL9: view

miRNA for BTNL9 Gene

miRTarBase miRNAs that target BTNL9

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for BTNL9 Gene

Localization for BTNL9 Gene

Subcellular locations from UniProtKB/Swiss-Prot for BTNL9 Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for BTNL9 Gene COMPARTMENTS Subcellular localization image for BTNL9 gene
Compartment Confidence
plasma membrane 3
extracellular 2
cytosol 1
endoplasmic reticulum 1
nucleus 1
peroxisome 1

Gene Ontology (GO) - Cellular Components for BTNL9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with BTNL9: view

Pathways for BTNL9 Gene

SuperPathways for BTNL9 Gene

No Data Available

Interacting Proteins for BTNL9 Gene

Gene Ontology (GO) - Biological Process for BTNL9 Gene

None

No data available for Pathways by source for BTNL9 Gene

Transcripts for BTNL9 Gene

Unigene Clusters for BTNL9 Gene

Butyrophilin-like 9:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BTNL9 Gene

No ASD Table

Relevant External Links for BTNL9 Gene

GeneLoc Exon Structure for
BTNL9
ECgene alternative splicing isoforms for
BTNL9

Expression for BTNL9 Gene

mRNA expression in normal human tissues for BTNL9 Gene

mRNA differential expression in normal tissues according to GTEx for BTNL9 Gene

This gene is overexpressed in Adipose - Visceral (Omentum) (10.2), Breast - Mammary Tissue (6.7), Adipose - Subcutaneous (6.6), and Lung (4.0).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for BTNL9 Gene

SOURCE GeneReport for Unigene cluster for BTNL9 Gene Hs.546502

genes like me logo Genes that share expressions with BTNL9: view

Orthologs for BTNL9 Gene

This gene was present in the common ancestor of mammals.

Orthologs for BTNL9 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia BTNL9 36
  • 97.94 (n)
  • 96.29 (a)
BTNL9 37
  • 96 (a)
OneToOne
cow
(Bos Taurus)
Mammalia BTNL9 36
  • 78.43 (n)
  • 71.77 (a)
BTNL9 37
  • 73 (a)
OneToOne
dog
(Canis familiaris)
Mammalia BTNL9 36
  • 77.98 (n)
  • 74.25 (a)
BTNL9 37
  • 72 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Btnl9 36
  • 75.64 (n)
  • 70.85 (a)
Btnl9 16
Btnl9 37
  • 69 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia BTNL9 37
  • 57 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 37
  • 39 (a)
ManyToMany
rat
(Rattus norvegicus)
Mammalia LOC684480 36
  • 73.75 (n)
  • 70.24 (a)
Species with no ortholog for BTNL9:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for BTNL9 Gene

ENSEMBL:
Gene Tree for BTNL9 (if available)
TreeFam:
Gene Tree for BTNL9 (if available)

Paralogs for BTNL9 Gene

Paralogs for BTNL9 Gene

genes like me logo Genes that share paralogs with BTNL9: view

Variants for BTNL9 Gene

Sequence variations from dbSNP and Humsavar for BTNL9 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type MAF
rs1467 -- 181,058,720(-) GCCAT(C/T)TGACA intron-variant
rs1053110 -- 181,061,260(+) TGTAG(C/T)AAAAT utr-variant-3-prime
rs2277935 -- 181,058,949(-) AGCCA(C/T)GTCCC intron-variant
rs2277936 -- 181,058,545(-) caggc(A/G)tatgt intron-variant
rs3806869 -- 181,058,353(-) CTCCA(C/T)TCTGA synonymous-codon, reference

Structural Variations from Database of Genomic Variants (DGV) for BTNL9 Gene

Variant ID Type Subtype PubMed ID
nsv428133 CNV Gain 18775914
dgv1883e1 CNV Complex 17122850
nsv509112 CNV Insertion 20534489
nsv818395 CNV Gain 17921354
nsv462588 CNV Gain 19166990
nsv471062 CNV Gain 18288195
dgv735n27 CNV Gain 19166990
nsv5162 CNV Insertion 18451855
dgv6406n71 CNV Gain 21882294
nsv883302 CNV Gain 21882294
esv1001577 CNV Insertion 20482838
esv1267126 CNV Insertion 17803354
dgv6407n71 CNV Loss 21882294
esv1265655 CNV Insertion 17803354
nsv10792 CNV Gain 18304495

Relevant External Links for BTNL9 Gene

HapMap Linkage Disequilibrium report
BTNL9

Disorders for BTNL9 Gene

(1) University of Copenhagen DISEASES for BTNL9 Gene

genes like me logo Genes that share disorders with BTNL9: view

No data available for UniProtKB/Swiss-Prot for BTNL9 Gene

Publications for BTNL9 Gene

  1. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 3 4
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. The DNA sequence and comparative analysis of human chromosome 5. (PMID: 15372022) Schmutz J. … Rubin E.M. (Nature 2004) 4
  5. The cluster of BTN genes in the extended major histocompatibility complex. (PMID: 11170752) Rhodes D.A. … Trowsdale J. (Genomics 2001) 23

Products for BTNL9 Gene

Sources for BTNL9 Gene

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