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Aliases for BTNL8 Gene

Aliases for BTNL8 Gene

  • Butyrophilin Like 8 2 3 5
  • B7-H5 Costimulatory Molecule 3
  • Butyrophilin-Like Protein 8 3
  • Butyrophilin-Like 8 2
  • BTN9.2 3

External Ids for BTNL8 Gene

Previous GeneCards Identifiers for BTNL8 Gene

  • GC05P180436
  • GC05P180258
  • GC05P180326
  • GC05P175051
  • GC05P180907
  • GC05P180908
  • GC05P180940

Summaries for BTNL8 Gene

GeneCards Summary for BTNL8 Gene

BTNL8 (Butyrophilin Like 8) is a Protein Coding gene. Among its related pathways are Innate Immune System and Butyrophilin (BTN) family interactions. An important paralog of this gene is BTNL3.

UniProtKB/Swiss-Prot for BTNL8 Gene

  • May stimulate primary immune response. Acts on T-cell stimulated sub-optimally through the TCR/CD3 complex stimulating their proliferation and cytokine production.

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BTNL8 Gene

Genomics for BTNL8 Gene

Regulatory Elements for BTNL8 Gene

Enhancers for BTNL8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G180865 1.1 ENCODE 10.3 -32.7 -32738 2.5 HDGF PKNOX1 CREB3L1 ZFP64 ARID4B SIN3A ZNF2 ZNF143 ZNF207 FOS ZFP62 ENSG00000233937 RACK1 MGAT1 OR2V2 BTNL8 TRIM7 ENSG00000250900 LINC00847
GH05G181027 1.2 Ensembl ENCODE 7 +129.1 129089 0.9 HDGF PKNOX1 ATF1 CREB3L1 SIN3A ETS1 ELK1 KLF13 KDM4B GTF2B BTNL3 ENSG00000233937 MGAT1 BTNL8 BTNL9 RNU6-1036P
GH05G180869 0.8 ENCODE 10.3 -29.9 -29882 0.2 HDAC1 RB1 ARNT FEZF1 ZNF2 RAD21 ZNF366 SCRT2 ZNF143 RELB MGAT1 BTNL8 TRIM7 ENSG00000250900 ZFP62
GH05G180873 1.6 FANTOM5 Ensembl ENCODE 4.9 -25.1 -25126 1.2 HDGF PKNOX1 FOXA2 ATF1 CREB3L1 ARNT CBX5 GATA2 FOS JUNB ZFP62 BTNL8 MGAT1
GH05G181046 0.8 FANTOM5 7.2 +147.4 147368 0.4 NFRKB DDX20 ZNF133 ZNF175 ZNF266 NFXL1 CDC5L NCOR1 PATZ1 ZNF239 BTNL9 BTNL8 BTNL3 MIR8089 PIR56545
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BTNL8 on UCSC Golden Path with GeneCards custom track

Genomic Location for BTNL8 Gene

Chromosome:
5
Start:
180,899,077 bp from pter
End:
180,952,166 bp from pter
Size:
53,090 bases
Orientation:
Plus strand

Genomic View for BTNL8 Gene

Genes around BTNL8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BTNL8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BTNL8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTNL8 Gene

Proteins for BTNL8 Gene

  • Protein details for BTNL8 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6UX41-BTNL8_HUMAN
    Recommended name:
    Butyrophilin-like protein 8
    Protein Accession:
    Q6UX41
    Secondary Accessions:
    • A4QMZ8
    • A6NEX6
    • B7Z409
    • B7Z5B1
    • E9PEF6
    • E9PG07
    • F2Z2B2
    • F8W712
    • Q9H730

    Protein attributes for BTNL8 Gene

    Size:
    500 amino acids
    Molecular mass:
    56748 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for BTNL8 Gene

neXtProt entry for BTNL8 Gene

Post-translational modifications for BTNL8 Gene

  • Glycosylation at Asn103
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for BTNL8 Gene

Domains & Families for BTNL8 Gene

Gene Families for BTNL8 Gene

Suggested Antigen Peptide Sequences for BTNL8 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q6UX41

UniProtKB/Swiss-Prot:

BTNL8_HUMAN :
  • Belongs to the immunoglobulin superfamily. BTN/MOG family.
Family:
  • Belongs to the immunoglobulin superfamily. BTN/MOG family.
genes like me logo Genes that share domains with BTNL8: view

Function for BTNL8 Gene

Molecular function for BTNL8 Gene

UniProtKB/Swiss-Prot Function:
May stimulate primary immune response. Acts on T-cell stimulated sub-optimally through the TCR/CD3 complex stimulating their proliferation and cytokine production.
UniProtKB/Swiss-Prot Induction:
Down-regulated in neutrophils after treatment with LPS and TNF.

Gene Ontology (GO) - Molecular Function for BTNL8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 21982860
genes like me logo Genes that share ontologies with BTNL8: view
genes like me logo Genes that share phenotypes with BTNL8: view

Animal Model Products

CRISPR Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BTNL8 Gene

Localization for BTNL8 Gene

Subcellular locations from UniProtKB/Swiss-Prot for BTNL8 Gene

Membrane; Single-pass type I membrane protein.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for BTNL8 gene
Compartment Confidence
plasma membrane 5
nucleus 3
extracellular 2
peroxisome 1
endoplasmic reticulum 1
cytosol 1

Gene Ontology (GO) - Cellular Components for BTNL8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with BTNL8: view

Pathways & Interactions for BTNL8 Gene

genes like me logo Genes that share pathways with BTNL8: view

Pathways by source for BTNL8 Gene

Gene Ontology (GO) - Biological Process for BTNL8 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002250 adaptive immune response IEA --
GO:0002376 immune system process IEA --
genes like me logo Genes that share ontologies with BTNL8: view

No data available for SIGNOR curated interactions for BTNL8 Gene

Drugs & Compounds for BTNL8 Gene

No Compound Related Data Available

Transcripts for BTNL8 Gene

Unigene Clusters for BTNL8 Gene

Butyrophilin-like 8:
Representative Sequences:

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for BTNL8 Gene

ExUns: 1 ^ 2 ^ 3a · 3b ^ 4a · 4b · 4c
SP1:
SP2: -

Relevant External Links for BTNL8 Gene

GeneLoc Exon Structure for
BTNL8
ECgene alternative splicing isoforms for
BTNL8

Expression for BTNL8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BTNL8 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for BTNL8 Gene

This gene is overexpressed in Whole Blood (x17.9), Small Intestine - Terminal Ileum (x14.5), and Colon - Transverse (x10.5).

Protein differential expression in normal tissues from HIPED for BTNL8 Gene

This gene is overexpressed in Spleen (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for BTNL8 Gene



Protein tissue co-expression partners for BTNL8 Gene

NURSA nuclear receptor signaling pathways regulating expression of BTNL8 Gene:

BTNL8

SOURCE GeneReport for Unigene cluster for BTNL8 Gene:

Hs.189109

mRNA Expression by UniProt/SwissProt for BTNL8 Gene:

Q6UX41-BTNL8_HUMAN
Tissue specificity: Expressed in neutrophils. Isoforms 1 and 5 are expressed at high levels in the colon, lung,testis, lymph nodes and thyroid tissue. Isoform 5, but not isoform 1, is detected in spleen.

Evidence on tissue expression from TISSUES for BTNL8 Gene

  • Intestine(4.4)
genes like me logo Genes that share expression patterns with BTNL8: view

Primer Products

No data available for Phenotype-based relationships between genes and organs from Gene ORGANizer for BTNL8 Gene

Orthologs for BTNL8 Gene

This gene was present in the common ancestor of mammals.

Orthologs for BTNL8 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia BTNL8 34 35
  • 98.76 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 44 (a)
ManyToMany
-- 35
  • 37 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 35
  • 40 (a)
ManyToMany
-- 35
  • 39 (a)
ManyToMany
Species where no ortholog for BTNL8 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for BTNL8 Gene

ENSEMBL:
Gene Tree for BTNL8 (if available)
TreeFam:
Gene Tree for BTNL8 (if available)

Paralogs for BTNL8 Gene

Paralogs for BTNL8 Gene

(13) SIMAP similar genes for BTNL8 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with BTNL8: view

Variants for BTNL8 Gene

Sequence variations from dbSNP and Humsavar for BTNL8 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs1000087075 -- 180,908,570(+) CTTTT(G/T)TATGT intron-variant, upstream-variant-2KB
rs1000164800 -- 180,907,313(+) ATCGC(A/C/G)TCGGC intron-variant
rs1000203615 -- 180,928,264(+) AAATC(C/T)TTTAC intron-variant
rs1000255270 -- 180,900,929(+) GCTGC(C/G)TTGTG intron-variant, upstream-variant-2KB
rs1000295706 -- 180,940,842(+) AGGCA(A/G)ATCAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for BTNL8 Gene

Variant ID Type Subtype PubMed ID
dgv10246n54 CNV loss 21841781
dgv1066e199 CNV deletion 23128226
dgv1685e212 CNV gain 25503493
dgv1686e212 CNV loss 25503493
dgv1687e212 CNV loss 25503493
dgv1688e212 CNV gain 25503493
dgv1689e212 CNV gain 25503493
dgv1690e212 CNV gain 25503493
dgv215n111 OTHER complex 26073780
dgv5851n100 CNV gain 25217958
dgv5852n100 CNV gain+loss 25217958
dgv5853n100 CNV gain+loss 25217958
dgv5854n100 CNV loss 25217958
dgv5855n100 CNV gain 25217958
dgv9n29 CNV loss 16826518
esv2421695 CNV deletion 20811451
esv2427567 CNV insertion 19546169
esv25559 CNV gain+loss 19812545
esv2601471 CNV insertion 19546169
esv2760983 CNV loss 21179565
esv29779 CNV gain+loss 19812545
esv3441053 CNV insertion 20981092
esv3607798 CNV loss 21293372
esv3607799 CNV gain 21293372
esv992764 CNV loss 20482838
nsv1074358 CNV deletion 25765185
nsv10790 CNV gain+loss 18304495
nsv10791 CNV gain+loss 18304495
nsv1137540 CNV deletion 24896259
nsv1161322 CNV duplication 26073780
nsv1161325 CNV deletion 26073780
nsv428133 CNV gain 18775914
nsv513283 CNV loss 21212237
nsv514338 CNV gain+loss 21397061
nsv600682 CNV loss 21841781
nsv600683 CNV gain 21841781
nsv600684 CNV loss 21841781
nsv600685 CNV gain+loss 21841781
nsv600687 CNV loss 21841781
nsv819450 CNV loss 19587683
nsv820020 CNV loss 19587683
nsv821169 CNV deletion 20802225
nsv823367 CNV loss 20364138
nsv830566 CNV loss 17160897
nsv950741 CNV duplication 24416366
nsv950742 CNV deletion 24416366

Variation tolerance for BTNL8 Gene

Residual Variation Intolerance Score: 98.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 4.35; 63.24% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for BTNL8 Gene

Human Gene Mutation Database (HGMD)
BTNL8
SNPedia medical, phenotypic, and genealogical associations of SNPs for
BTNL8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for BTNL8 Gene

Disorders for BTNL8 Gene

Relevant External Links for BTNL8

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BTNL8

No disorders were found for BTNL8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BTNL8 Gene

Publications for BTNL8 Gene

  1. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 2 3 4 64
  2. BTNL8, a butyrophilin-like molecule that costimulates the primary immune response. (PMID: 24036152) Chapoval A.I. … Mezes P.S. (Mol. Immunol. 2013) 3 4 64
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  4. Signal peptide prediction based on analysis of experimentally verified cleavage sites. (PMID: 15340161) Zhang Z. … Henzel W.J. (Protein Sci. 2004) 3 4 64
  5. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64

Products for BTNL8 Gene

Sources for BTNL8 Gene

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