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Aliases for BTG4 Gene

Aliases for BTG4 Gene

  • BTG Anti-Proliferation Factor 4 2 3 5
  • BTG Family Member 4 2 3 4
  • B-Cell Translocation Gene 4 2 3
  • Protein PC3b 3 4
  • PC3B 3 4
  • Protein BTG4 3
  • APRO3 3

External Ids for BTG4 Gene

Previous GeneCards Identifiers for BTG4 Gene

  • GC11M113691
  • GC11M112850
  • GC11M111372
  • GC11M110875
  • GC11M110843
  • GC11M107262
  • GC11M111467

Summaries for BTG4 Gene

Entrez Gene Summary for BTG4 Gene

  • The protein encoded by this gene is a member of the BTG/Tob family. This family has structurally related proteins that appear to have antiproliferative properties. This encoded protein can induce G1 arrest in the cell cycle. [provided by RefSeq, Jul 2008]

GeneCards Summary for BTG4 Gene

BTG4 (BTG Anti-Proliferation Factor 4) is a Protein Coding gene. Among its related pathways are Deadenylation-dependent mRNA decay. An important paralog of this gene is BTG3.

UniProtKB/Swiss-Prot for BTG4 Gene

  • Shows marked antiproliferative activity, being able to induce G(1) arrest.

Gene Wiki entry for BTG4 Gene

Additional gene information for BTG4 Gene

No data available for CIViC summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BTG4 Gene

Genomics for BTG4 Gene

Regulatory Elements for BTG4 Gene

Enhancers for BTG4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11H111697 1.7 FANTOM5 Ensembl ENCODE dbSUPER 9.7 -184.0 -184030 2 PKNOX1 ATF1 ARNT CHAMP1 TCF12 GATA2 SMARCA5 ZEB2 SMARCB1 ZNF592 PPP2R1B NKAPD1 BTG4 C11orf88 MIR34B MIR34C SIK2 RN7SKP273 PIR48599
GH11H111357 1.6 FANTOM5 ENCODE dbSUPER 9.2 +149.8 149829 15 HDGF PKNOX1 FOXA2 MLX ZFP64 ARID4B DMAP1 YBX1 YY1 SLC30A9 COLCA2 COLCA1 LAYN BTG4 C11orf88 MIR34B MIR34C POU2AF1 RNU2-60P MIR4491
GH11H111413 1.4 Ensembl ENCODE dbSUPER 10 +98.1 98135 6 ELF3 HDGF PKNOX1 TBL1XR1 RB1 ARID4B BMI1 YBX1 BATF RAD21 COLCA1 RNU2-60P COLCA2 BTG4 C11orf88 MIR34B MIR34C LOC100132078 BCO2 GC11M111399
GH11H111776 1.4 Ensembl ENCODE dbSUPER 9.8 -263.1 -263147 2 HDGF FOXA2 PKNOX1 ATF1 ARID4B DMAP1 YY1 ZNF143 ATF7 RUNX3 PPP2R1B SIK2 LOC644277 POU2AF1 BTG4 C11orf88 MIR34B MIR34C ENSG00000254980 ENSG00000254990
GH11H111375 1.4 Ensembl ENCODE dbSUPER 9.2 +136.2 136247 5 HDGF PKNOX1 TBL1XR1 RB1 BMI1 BATF ZBTB40 ZNF143 ZNF207 ATF7 COLCA1 COLCA2 LOC644277 POU2AF1 BTG4 C11orf88 MIR34B MIR34C RNU2-60P MIR4491
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BTG4 on UCSC Golden Path with GeneCards custom track

Genomic Location for BTG4 Gene

Chromosome:
11
Start:
111,384,095 bp from pter
End:
111,514,733 bp from pter
Size:
130,639 bases
Orientation:
Minus strand

Genomic View for BTG4 Gene

Genes around BTG4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BTG4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BTG4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTG4 Gene

Proteins for BTG4 Gene

  • Protein details for BTG4 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NY30-BTG4_HUMAN
    Recommended name:
    Protein BTG4
    Protein Accession:
    Q9NY30
    Secondary Accessions:
    • Q8NEH7

    Protein attributes for BTG4 Gene

    Size:
    223 amino acids
    Molecular mass:
    25970 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for BTG4 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for BTG4 Gene

Post-translational modifications for BTG4 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for BTG4 Gene

No data available for DME Specific Peptides for BTG4 Gene

Domains & Families for BTG4 Gene

Gene Families for BTG4 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for BTG4 Gene

Suggested Antigen Peptide Sequences for BTG4 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9NY30

UniProtKB/Swiss-Prot:

BTG4_HUMAN :
  • Belongs to the BTG family.
Family:
  • Belongs to the BTG family.
genes like me logo Genes that share domains with BTG4: view

Function for BTG4 Gene

Molecular function for BTG4 Gene

UniProtKB/Swiss-Prot Function:
Shows marked antiproliferative activity, being able to induce G(1) arrest.

Phenotypes From GWAS Catalog for BTG4 Gene

genes like me logo Genes that share phenotypes with BTG4: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for BTG4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BTG4 Gene

Localization for BTG4 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for BTG4 gene
Compartment Confidence
cytosol 3
extracellular 2
mitochondrion 1
nucleus 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Endoplasmic reticulum (2)
  • Golgi apparatus (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for BTG4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005575 cellular_component ND --
genes like me logo Genes that share ontologies with BTG4: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for BTG4 Gene

Pathways & Interactions for BTG4 Gene

SuperPathway Contained pathways
1 Deadenylation-dependent mRNA decay
genes like me logo Genes that share pathways with BTG4: view

Pathways by source for BTG4 Gene

1 KEGG pathway for BTG4 Gene

Interacting Proteins for BTG4 Gene

Gene Ontology (GO) - Biological Process for BTG4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007050 cell cycle arrest TAS 10995567
GO:0008285 negative regulation of cell proliferation IEA,TAS 10995567
GO:0030182 neuron differentiation TAS 10995567
GO:0045930 negative regulation of mitotic cell cycle IEA --
genes like me logo Genes that share ontologies with BTG4: view

No data available for SIGNOR curated interactions for BTG4 Gene

Drugs & Compounds for BTG4 Gene

No Compound Related Data Available

Transcripts for BTG4 Gene

mRNA/cDNA for BTG4 Gene

(5) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(9) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BTG4 Gene

B-cell translocation gene 4:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for BTG4
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for BTG4 Gene

ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5a · 5b · 5c ^ 6 ^ 7
SP1: -
SP2:
SP3: -

Relevant External Links for BTG4 Gene

GeneLoc Exon Structure for
BTG4
ECgene alternative splicing isoforms for
BTG4

Expression for BTG4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BTG4 Gene

mRNA differential expression in normal tissues according to GTEx for BTG4 Gene

This gene is overexpressed in Testis (x47.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for BTG4 Gene



Protein tissue co-expression partners for BTG4 Gene

NURSA nuclear receptor signaling pathways regulating expression of BTG4 Gene:

BTG4

SOURCE GeneReport for Unigene cluster for BTG4 Gene:

Hs.128180

mRNA Expression by UniProt/SwissProt for BTG4 Gene:

Q9NY30-BTG4_HUMAN
Tissue specificity: Highly expressed in testis and in olfactory epithelium.
genes like me logo Genes that share expression patterns with BTG4: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BTG4 Gene

Orthologs for BTG4 Gene

This gene was present in the common ancestor of animals.

Orthologs for BTG4 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia BTG4 33 34
  • 99.55 (n)
dog
(Canis familiaris)
Mammalia BTG4 33 34
  • 87.33 (n)
cow
(Bos Taurus)
Mammalia BTG4 33 34
  • 87.03 (n)
mouse
(Mus musculus)
Mammalia Btg4 33 16 34
  • 77.98 (n)
oppossum
(Monodelphis domestica)
Mammalia BTG4 34
  • 60 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia BTG4 34
  • 52 (a)
OneToOne
chicken
(Gallus gallus)
Aves BTG4 33 34
  • 64.63 (n)
lizard
(Anolis carolinensis)
Reptilia BTG4 34
  • 54 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia btg4 33
  • 63.52 (n)
Str.3682 33
African clawed frog
(Xenopus laevis)
Amphibia LOC397913 33
zebrafish
(Danio rerio)
Actinopterygii btg4 33 34
  • 58.33 (n)
fruit fly
(Drosophila melanogaster)
Insecta Tob 34
  • 9 (a)
OneToMany
Species where no ortholog for BTG4 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for BTG4 Gene

ENSEMBL:
Gene Tree for BTG4 (if available)
TreeFam:
Gene Tree for BTG4 (if available)

Paralogs for BTG4 Gene

Paralogs for BTG4 Gene

(4) SIMAP similar genes for BTG4 Gene using alignment to 2 proteins:

Pseudogenes.org Pseudogenes for BTG4 Gene

genes like me logo Genes that share paralogs with BTG4: view

Variants for BTG4 Gene

Sequence variations from dbSNP and Humsavar for BTG4 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000032601 -- 111,462,038(+) GGTGA(A/G)GCCCA intron-variant
rs1000063570 -- 111,480,979(+) AAAAA(A/G)ACACA intron-variant
rs1000115612 -- 111,416,937(+) TTTTC(C/T)TAGAG intron-variant, nc-transcript-variant
rs1000132707 -- 111,433,919(+) GGATG(C/T)GGAAA intron-variant
rs1000156439 -- 111,497,002(+) TTATG(C/T)GGATC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for BTG4 Gene

Variant ID Type Subtype PubMed ID
nsv472582 CNV novel sequence insertion 20440878
nsv832268 CNV loss 17160897

Variation tolerance for BTG4 Gene

Residual Variation Intolerance Score: 38.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.39; 8.61% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for BTG4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BTG4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for BTG4 Gene

Disorders for BTG4 Gene

Relevant External Links for BTG4

Genetic Association Database (GAD)
BTG4
Human Genome Epidemiology (HuGE) Navigator
BTG4
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BTG4

No disorders were found for BTG4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BTG4 Gene

Publications for BTG4 Gene

  1. Cloning of PC3B, a novel member of the PC3/BTG/TOB family of growth inhibitory genes, highly expressed in the olfactory epithelium. (PMID: 10995567) Buanne P … Tirone F (Genomics 2000) 2 3 4 60
  2. A potentially functional polymorphism in the promoter region of miR-34b/c is associated with an increased risk for primary hepatocellular carcinoma. (PMID: 20309940) Xu Y … Hu Z (International journal of cancer 2011) 3 45 60
  3. Identification of a potential role for POU2AF1 and BTG4 in the deletion of 11q23 in chronic lymphocytic leukemia. (PMID: 15672409) Auer RL … Cotter FE (Genes, chromosomes & cancer 2005) 3 22 60
  4. Frequent promoter hypermethylation and transcriptional downregulation of BTG4 gene in gastric cancer. (PMID: 19576178) Dong W … Wang L (Biochemical and biophysical research communications 2009) 3 60
  5. Epigenetic silencing of microRNA-34b/c and B-cell translocation gene 4 is associated with CpG island methylation in colorectal cancer. (PMID: 18519671) Toyota M … Tokino T (Cancer research 2008) 3 60

Products for BTG4 Gene

Sources for BTG4 Gene

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