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Aliases for BTF3P9 Gene

Aliases for BTF3P9 Gene

  • Basic Transcription Factor 3 Pseudogene 9 2 3 5

External Ids for BTF3P9 Gene

Previous GeneCards Identifiers for BTF3P9 Gene

  • GC01P227623
  • GC01P198138

Summaries for BTF3P9 Gene

GeneCards Summary for BTF3P9 Gene

BTF3P9 (Basic Transcription Factor 3 Pseudogene 9) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BTF3P9 Gene

Genomics for BTF3P9 Gene

Regulatory Elements for BTF3P9 Gene

Enhancers for BTF3P9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F227431 1.3 Ensembl ENCODE 0.8 -1.9 -1866 1.5 ATF1 ARNT CREB3L1 ZNF2 ZNF121 ZNF416 FOS MCM3 YY2 REST CICP26 ENSG00000269890 C1orf35 CDC42BPA JMJD4 ENSG00000234277 ENSG00000242757 BTF3P9
GH01F227437 1.1 Ensembl ENCODE 0.8 +4.0 3993 1.0 YBX3 PKNOX1 CBX3 ARNT ZNF2 RAD21 RFX5 CHAMP1 YY1 GATA2 CDC42BPA IBA57-AS1 ENSG00000269890 TRIM17 ENSG00000231563 CICP26 WNT9A BTF3P9 ENSG00000237193
GH01F227440 0.6 Ensembl ENCODE 0.4 +7.2 7234 0.6 RFX1 CDC42BPA BTF3P9 ENSG00000237193
GH01F227447 0.6 Ensembl 0.4 +13.9 13863 0.3 CTCF SMARCA4 ETV4 GABPB1 ZBTB33 RAD21 CDC42BPA BTF3P9 ENSG00000237193
GH01F227441 0.4 ENCODE 0.4 +6.5 6482 0.2 ARID1B RNF2 CDC42BPA BTF3P9 ENSG00000237193
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BTF3P9 on UCSC Golden Path with GeneCards custom track

Genomic Location for BTF3P9 Gene

Chromosome:
1
Start:
227,433,913 bp from pter
End:
227,434,606 bp from pter
Size:
694 bases
Orientation:
Plus strand

Genomic View for BTF3P9 Gene

Genes around BTF3P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BTF3P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BTF3P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTF3P9 Gene

Proteins for BTF3P9 Gene

Post-translational modifications for BTF3P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BTF3P9 Gene

Domains & Families for BTF3P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BTF3P9 Gene

Function for BTF3P9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BTF3P9 Gene

Localization for BTF3P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BTF3P9 Gene

Pathways & Interactions for BTF3P9 Gene

SuperPathways for BTF3P9 Gene

No Data Available

Interacting Proteins for BTF3P9 Gene

Gene Ontology (GO) - Biological Process for BTF3P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BTF3P9 Gene

Transcripts for BTF3P9 Gene

mRNA/cDNA for BTF3P9 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BTF3P9 Gene

Basic transcription factor 3 pseudogene 9:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BTF3P9 Gene

No ASD Table

Relevant External Links for BTF3P9 Gene

GeneLoc Exon Structure for
BTF3P9
ECgene alternative splicing isoforms for
BTF3P9

Expression for BTF3P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BTF3P9 Gene

NURSA nuclear receptor signaling pathways regulating expression of BTF3P9 Gene:

BTF3P9

SOURCE GeneReport for Unigene cluster for BTF3P9 Gene:

Hs.586511
genes like me logo Genes that share expression patterns with BTF3P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for BTF3P9 Gene

Orthologs for BTF3P9 Gene

Evolution for BTF3P9 Gene

ENSEMBL:
Gene Tree for BTF3P9 (if available)
TreeFam:
Gene Tree for BTF3P9 (if available)

No data available for Orthologs for BTF3P9 Gene

Paralogs for BTF3P9 Gene

No data available for Paralogs for BTF3P9 Gene

Variants for BTF3P9 Gene

Relevant External Links for BTF3P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BTF3P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BTF3P9 Gene

Disorders for BTF3P9 Gene

Relevant External Links for BTF3P9

Genetic Association Database (GAD)
BTF3P9
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BTF3P9

No disorders were found for BTF3P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BTF3P9 Gene

Publications for BTF3P9 Gene

  1. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for BTF3P9 Gene

Sources for BTF3P9 Gene

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