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Aliases for BTF3P9 Gene

Aliases for BTF3P9 Gene

  • Basic Transcription Factor 3 Pseudogene 9 2 3 5

External Ids for BTF3P9 Gene

Previous GeneCards Identifiers for BTF3P9 Gene

  • GC01P227623
  • GC01P198138

Summaries for BTF3P9 Gene

GeneCards Summary for BTF3P9 Gene

BTF3P9 (Basic Transcription Factor 3 Pseudogene 9) is a Pseudogene.

Additional gene information for BTF3P9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BTF3P9 Gene

Genomics for BTF3P9 Gene

Regulatory Elements for BTF3P9 Gene

Enhancers for BTF3P9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H227431 1.6 Ensembl ENCODE dbSUPER 0.7 -1.9 -1866 1 PKNOX1 FOXA2 ARNT ZNF2 ZNF766 ZNF416 FOS MCM3 REST ZNF662 CICP26 ZNF678 C1orf35 ENSG00000269890 CDC42BPA HIST3H3 JMJD4 PSEN2 LINC01641 BTF3P9
GH01H227437 1.1 Ensembl ENCODE 0.7 +4.1 4084 0 YBX3 RB1 ZNF2 RAD21 CHAMP1 RFX5 YY1 ZNF766 GATA2 ZNF654 CDC42BPA BTF3P9 ENSG00000237193
GH01H227440 0.4 ENCODE 0.4 +7.2 7234 0 RFX1 CDC42BPA BTF3P9 ENSG00000237193
GH01H227441 0.2 ENCODE 0.4 +6.5 6482 0 CDC42BPA BTF3P9 ENSG00000237193
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BTF3P9 on UCSC Golden Path with GeneCards custom track

Genomic Location for BTF3P9 Gene

Chromosome:
1
Start:
227,433,913 bp from pter
End:
227,434,606 bp from pter
Size:
694 bases
Orientation:
Plus strand

Genomic View for BTF3P9 Gene

Genes around BTF3P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BTF3P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BTF3P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTF3P9 Gene

Proteins for BTF3P9 Gene

Post-translational modifications for BTF3P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BTF3P9 Gene

Domains & Families for BTF3P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BTF3P9 Gene

Function for BTF3P9 Gene

Phenotypes From GWAS Catalog for BTF3P9 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for BTF3P9
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BTF3P9 Gene

Localization for BTF3P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BTF3P9 Gene

Pathways & Interactions for BTF3P9 Gene

SuperPathways for BTF3P9 Gene

No Data Available

Interacting Proteins for BTF3P9 Gene

Gene Ontology (GO) - Biological Process for BTF3P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BTF3P9 Gene

Drugs & Compounds for BTF3P9 Gene

No Compound Related Data Available

Transcripts for BTF3P9 Gene

mRNA/cDNA for BTF3P9 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BTF3P9 Gene

Basic transcription factor 3 pseudogene 9:
Representative Sequences:

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for BTF3P9
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for BTF3P9 Gene

No ASD Table

Relevant External Links for BTF3P9 Gene

GeneLoc Exon Structure for
BTF3P9
ECgene alternative splicing isoforms for
BTF3P9

Expression for BTF3P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BTF3P9 Gene

NURSA nuclear receptor signaling pathways regulating expression of BTF3P9 Gene:

BTF3P9

SOURCE GeneReport for Unigene cluster for BTF3P9 Gene:

Hs.586511
genes like me logo Genes that share expression patterns with BTF3P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BTF3P9 Gene

Orthologs for BTF3P9 Gene

Evolution for BTF3P9 Gene

ENSEMBL:
Gene Tree for BTF3P9 (if available)
TreeFam:
Gene Tree for BTF3P9 (if available)

No data available for Orthologs for BTF3P9 Gene

Paralogs for BTF3P9 Gene

No data available for Paralogs for BTF3P9 Gene

Variants for BTF3P9 Gene

Relevant External Links for BTF3P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BTF3P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BTF3P9 Gene

Disorders for BTF3P9 Gene

Relevant External Links for BTF3P9

Genetic Association Database (GAD)
BTF3P9
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BTF3P9

No disorders were found for BTF3P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BTF3P9 Gene

Publications for BTF3P9 Gene

  1. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 45 60
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for BTF3P9 Gene

Sources for BTF3P9 Gene

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