Free for academic non-profit institutions. Other users need a Commercial license

Aliases for BTBD9-AS1 Gene

Subcategory (RNA class) for BTBD9-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for BTBD9-AS1 Gene

  • BTBD9 Antisense RNA 1 2 3 5
  • BTBD9 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for BTBD9-AS1 Gene

Previous GeneCards Identifiers for BTBD9-AS1 Gene

  • GC06P038451
  • GC06P038550
  • GC06P038482
  • GC06P038645
  • GC06P038647

Summaries for BTBD9-AS1 Gene

GeneCards Summary for BTBD9-AS1 Gene

BTBD9-AS1 (BTBD9 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BTBD9-AS1 Gene

Genomics for BTBD9-AS1 Gene

Regulatory Elements for BTBD9-AS1 Gene

Enhancers for BTBD9-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F037791 1.4 Ensembl ENCODE 9.3 -683.6 -683648 1.0 PKNOX1 ARNT MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 SLC30A9 ZNF143 CMTR1 MDGA1 BTBD9-AS1 ENSG00000225945 GC06P040033
GH06F038503 1.1 Ensembl ENCODE 11.7 +28.2 28217 1.2 ZNF792 SAP130 ARID4B YBX1 ZSCAN9 ZFHX2 ZNF207 PRDM10 HOMEZ MIXL1 ANKRD18EP BTBD9-AS1 PIR44974
GH06F038404 1.1 Ensembl ENCODE 10.3 -70.1 -70088 1.1 SOX13 ATF1 ZNF792 SAP130 CEBPG RAD21 TEAD3 YY1 GATA3 HNF4G BTBD9-AS1 BTBD9 GC06M038171
GH06F038390 1.2 VISTA Ensembl 9 -83.5 -83537 1.4 JUN JUND GATA3 SMARCA4 ZNF692 ZNF169 FOSL2 FOS ZNF24 CUX1 BTBD9-AS1 GC06M038171
GH06F038212 1.1 Ensembl ENCODE 9.8 -262.2 -262242 1.4 ATF1 INSM2 ZNF76 KLF17 FEZF1 RAD21 ZNF2 GLIS2 ZNF366 CREM BTBD9-AS1 SAYSD1 GC06P039126 LOC105375045
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BTBD9-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for BTBD9-AS1 Gene

38,475,148 bp from pter
38,500,230 bp from pter
25,083 bases
Plus strand

Genomic View for BTBD9-AS1 Gene

Genes around BTBD9-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BTBD9-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BTBD9-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTBD9-AS1 Gene

Proteins for BTBD9-AS1 Gene

Post-translational modifications for BTBD9-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BTBD9-AS1 Gene

Domains & Families for BTBD9-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BTBD9-AS1 Gene

Function for BTBD9-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BTBD9-AS1 Gene

Localization for BTBD9-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BTBD9-AS1 Gene

Pathways & Interactions for BTBD9-AS1 Gene

SuperPathways for BTBD9-AS1 Gene

No Data Available

Interacting Proteins for BTBD9-AS1 Gene

Gene Ontology (GO) - Biological Process for BTBD9-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for BTBD9-AS1 Gene

Transcripts for BTBD9-AS1 Gene

mRNA/cDNA for BTBD9-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BTBD9-AS1 Gene

No ASD Table

Relevant External Links for BTBD9-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for BTBD9-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BTBD9-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for BTBD9-AS1 Gene

This gene is overexpressed in Testis (x40.7).
genes like me logo Genes that share expression patterns with BTBD9-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for BTBD9-AS1 Gene

Orthologs for BTBD9-AS1 Gene

Evolution for BTBD9-AS1 Gene

Gene Tree for BTBD9-AS1 (if available)
Gene Tree for BTBD9-AS1 (if available)

No data available for Orthologs for BTBD9-AS1 Gene

Paralogs for BTBD9-AS1 Gene

No data available for Paralogs for BTBD9-AS1 Gene

Variants for BTBD9-AS1 Gene

Sequence variations from dbSNP and Humsavar for BTBD9-AS1 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs111671338 -- 38,482,024(+) ATGTT(C/G)AAGGG intron-variant
rs111814431 -- 38,483,392(+) CTGCC(C/T)CACTG intron-variant
rs112565755 -- 38,483,602(+) TGTCT(A/G)TCTGT intron-variant
rs112924626 -- 38,481,918(+) CCAAG(C/G)AACAT intron-variant
rs114917539 -- 38,481,823(+) TTCAG(C/T)GCAAC intron-variant

Relevant External Links for BTBD9-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BTBD9-AS1 Gene

Disorders for BTBD9-AS1 Gene

No disorders were found for BTBD9-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BTBD9-AS1 Gene

Publications for BTBD9-AS1 Gene

No publications were found for BTBD9-AS1 Gene.

Products for BTBD9-AS1 Gene

Sources for BTBD9-AS1 Gene

Loading form....