BTBD19 Gene
protein-coding GIFtS: 31
GCID: GC01P045274
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BTB (POZ) domain containing 19
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Aliases
for BTBD19 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| BTB (POZ) Domain Containing 191 2 | | BTB/POZ Domain-Containing Protein 192 | | Novel BTB Domain Containing Protein2 |
Export aliases for BTBD19 gene to outside databasesPrevious GC identifers: GC01P045048 GC01P043388 |
Summaries
for BTBD19 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
-- |
Genomic Views
for BTBD19 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000001.10 NC_018912.1 NT_032977.9
Regulatory elements:
 Search SABiosciences Regulatory transcription factor binding sites for BTBD19
Other transcription factors
Search SABiosciences Chromatin IP Primers for BTBD19
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat BTBD19 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 1p34.1 Ensembl cytogenetic band: 1p34.1 HGNC cytogenetic band: 1p34.1BTBD19 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 1 GeneLoc Exon Structure GeneLoc location for GC01P045274: view genomic region
(about GC identifiers)
Start:
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45,274,154 bp from pter |
End:
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45,281,257 bp from pter |
Size:
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7,104 bases |
Orientation:
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plus strand |
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Proteins
for BTBD19 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: BTBDJ_HUMAN, C9JJ37 (See
protein sequence)Recommended Name: BTB/POZ domain-containing protein 19 Size: 291 amino acids; 32365 Da
Sequence caution: Sequence=CAX15036.1; Type=Erroneous gene model prediction; Sequence=CAX15037.1; Type=Erroneous genemodel prediction;
Secondary accessions: B4E384 B7ZC36 B7ZC37Alternative splicing: 2 isoforms: C9JJ37-1 C9JJ37-2 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for BTBD19: NX_C9JJ37
BTBD19 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_001130009.1
ENSEMBL proteins: ENSP00000386506 ENSP00000410162 ENSP00000395461 ENSP00000405193
Human Recombinant Protein Products for BTBD19:
BTBD19 Antibody Products:
Assay Products for BTBD19: |
Protein
Domains /
Families
for BTBD19 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
BTBD19 for domains About GeneDecksing
4 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry C9JJ37ProtoNet protein and cluster: C9JJ37 UniProtKB/Swiss-Prot: BTBDJ_HUMAN, C9JJ37Similarity: Contains 1 BACK (BTB/Kelch associated) domainSimilarity: Contains 1 BTB (POZ) domain |
Function
for BTBD19 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase,
shRNA from
OriGene,
Sirion Biotech,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Sirion Biotech,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
Sirion Biotech,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Animal Models:
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for BTBD19
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for BTBD19
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector: BTBD19 (NM_001136537) | |  | Browse Sino Biological Human cDNA Clones | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for BTBD19 | |  | Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat BTBD19 |
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for BTBD19 |
|
Pathways & Interactions
for BTBD19 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for BTBD19
|
Drugs & Compounds
for BTBD19 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
 Browse Tocris compounds for BTBD19
Search CenterWatch for drugs/clinical trials and news about BTBD19 / BTBDJ
|
Transcripts
for BTBD19 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
Sirion Biotech,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for BTBD19 gene: NM_001136537.1 Unigene Cluster for BTBD19: BTB (POZ) domain containing 19 Hs.743557 [show with all ESTs]Unigene Representative Sequence: AK05615010 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000409335 ENST00000439563 ENST00000485668 ENST00000482715 ENST00000475105
ENST00000495433 ENST00000489976 ENST00000464114 ENST00000450269(uc010ole.1)
ENST00000453418(uc010old.1)
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for BTBD19
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for BTBD19
OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: BTBD19 (NM_001136537) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for BTBD19 | | | Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat BTBD19 |
Additional cDNA sequence: AF086150.1 AK023857.1 AK056150.1 AK304611.1 10 DOTS entries: DT.446087 DT.86854942 DT.115474 DT.95369745 DT.91991440 DT.95256828 DT.95362830 DT.95369746 DT.92418410 DT.95238701 24/58 AceView cDNA sequences (see all 58): BQ448126 AI819357 AA973720 BX105060 AI290126 AF086150 BF732969 AI038209 AI282554 BG766202 AI829767 AK056150 AA868460 AI351885 AA418192 AW450454 AW834794 W20341 BF828217 BQ434825 BQ183759 AA872731 AW834759 AI540241
GeneLoc Exon Structure
|
Expression
for BTBD19 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| BTBD19 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: CCCTGCGGAG
About this image
See BTBD19 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for BTBD19
SOURCE GeneReport for Unigene cluster: Hs.743557
SABiosciences Custom PCR Arrays for BTBD19
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for BTBD19
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat BTBD19 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat BTBD19 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat BTBD19 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for BTBD19 |
Orthologs
for BTBD19 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of animals.
Orthologs for BTBD19 gene from 3/13 species (see all 13) About this table
ENSEMBL Gene Tree for BTBD19 (if available)
TreeFam Gene Tree for BTBD19 (if available) |
Paralogs
for BTBD19 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for BTBD19 gene
- BTBD12 BTBD22 BTBD62 BTBD32 BTBD92
BTBD19 for paralogs About GeneDecksing
|
Genomic Variants
for BTBD19 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 1 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
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HapMap Linkage Disequilibrium report for BTBD19 (45274154 - 45281257 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for BTBD19: -- | SABiosciences Cancer Mutation PCR Assays |
| | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing BTBD19 |
|
Disorders
/ Diseases
for BTBD19 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
| -- |
Publications
for BTBD19 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for BTBD19 gene integrated from 9 sources:
(articles sorted by number of sources associating them with BTBD19) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
- The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)2 Gregory S.G.... Bentley D.R. (2006)
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External Searches for BTBD19 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
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Genome Databases showing BTBD19 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
|
|
Other Databases showing BTBD19 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing BTBD19 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| Name | Description |
| PharmGKB entry for BTBD19 | Pharmacogenomics, SNPs, Pathways |
|
| | |
About This Section
| Patent Information for BTBD19 gene:
Search GeneIP for patents involving BTBD19
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
|
Products
for BTBD19 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
About This Section
|
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| | |  | Browse OriGene Antibodies | | Browse OriGene shRNA RFPs | | | Browse OriGene 29mer shRNA kits in GFP-retroviral vector | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for BTBD19 | | | OriGene Protein Over-expression Lysate for BTBD19 | | Browse OriGene Fluorogenic Cell Assay Kits | | | OriGene siRNA for BTBD19 | | Browse 3'-UTR reporter clones for miRNA target validation | | | OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for BTBD19 | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for BTBD19 | | | Browse OriGene GFP tagged cDNA clones in CMV expression vector | | Browse OriGene MicroRNA Expression Plasmids | | | Browse OriGene basic RS shRNAs | | Browse OriGene validated miRNA SYBR primer pairs | | | Browse OriGene full length recombinant human proteins expressed in human HEK293 cells | | OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling | | | OriGene Custom Antibody Services for BTBD19 | | OriGene Custom Protein Services for BTBD19 | | | OriGene Custom Immunoassay Development | | |
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| | | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat BTBD19 | | | QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing BTBD19 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat BTBD19 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat BTBD19 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat BTBD19 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat BTBD19 |
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| | | | Search Tocris compounds for BTBD19 |
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 | | | BTBD19 Proteins, Antibodies, CLIAs, and ELISAs |
| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for BTBD19 |
|  |  |  |  | | | | Search ThermoFisher Antibodies for BTBD19 |
| | | Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat BTBD19 |
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