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Aliases for BTBD19 Gene

Aliases for BTBD19 Gene

  • BTB (POZ) Domain Containing 19 2 3

External Ids for BTBD19 Gene

Summaries for BTBD19 Gene

GeneCards Summary for BTBD19 Gene

BTBD19 (BTB (POZ) Domain Containing 19) is a Protein Coding gene. An important paralog of this gene is BTBD9.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BTBD19 Gene

Genomics for BTBD19 Gene

Genomic Location for BTBD19 Gene

Start:
44,807,704 bp from pter
End:
44,815,585 bp from pter
Size:
7,882 bases
Orientation:
Plus strand

Genomic View for BTBD19 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BTBD19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTBD19 Gene

No data available for Regulatory Elements for BTBD19 Gene

Proteins for BTBD19 Gene

  • Protein details for BTBD19 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    C9JJ37-BTBDJ_HUMAN
    Recommended name:
    BTB/POZ domain-containing protein 19
    Protein Accession:
    C9JJ37
    Secondary Accessions:
    • B4E384
    • B7ZC36
    • B7ZC37

    Protein attributes for BTBD19 Gene

    Size:
    291 amino acids
    Molecular mass:
    32365 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=CAX15036.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305}; Sequence=CAX15037.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};

    Alternative splice isoforms for BTBD19 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for BTBD19 Gene

Proteomics data for BTBD19 Gene at MOPED

Post-translational modifications for BTBD19 Gene

No Post-translational modifications

Other Protein References for BTBD19 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for BTBD19 Gene

Domains for BTBD19 Gene

Gene Families for BTBD19 Gene

HGNC:
  • BTBD :BTB/POZ domain containing

Protein Domains for BTBD19 Gene

UniProtKB/Swiss-Prot:

BTBDJ_HUMAN
Domain:
  • Contains 1 BACK (BTB/Kelch associated) domain.:
    • C9JJ37
  • Contains 1 BTB (POZ) domain.:
    • C9JJ37
genes like me logo Genes that share domains with BTBD19: view

Function for BTBD19 Gene

Gene Ontology (GO) - Molecular Function for BTBD19 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with BTBD19: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for BTBD19 Gene

Localization for BTBD19 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for BTBD19 Gene COMPARTMENTS Subcellular localization image for BTBD19 gene
Compartment Confidence
cytosol 2
extracellular 2
nucleus 2

No data available for Gene Ontology (GO) - Cellular Components for BTBD19 Gene

Pathways for BTBD19 Gene

SuperPathways for BTBD19 Gene

No Data Available

Interacting Proteins for BTBD19 Gene

STRING Interaction Network Preview (showing 3 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000395461%0d%0a9606.ENSP00000359795%0d%0a9606.ENSP00000340698%0d%0a9606.ENSP00000319254%0d%0a
Selected Interacting proteins: ENSP00000395461 for BTBD19 Gene via STRING

Gene Ontology (GO) - Biological Process for BTBD19 Gene

None

No data available for Pathways by source for BTBD19 Gene

Transcripts for BTBD19 Gene

Unigene Clusters for BTBD19 Gene

BTB (POZ) domain containing 19:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BTBD19 Gene

No ASD Table

Relevant External Links for BTBD19 Gene

GeneLoc Exon Structure for
BTBD19
ECgene alternative splicing isoforms for
BTBD19

Expression for BTBD19 Gene

mRNA expression in normal human tissues for BTBD19 Gene

SOURCE GeneReport for Unigene cluster for BTBD19 Gene Hs.632400

genes like me logo Genes that share expressions with BTBD19: view

Orthologs for BTBD19 Gene

This gene was present in the common ancestor of animals.

Orthologs for BTBD19 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia BTBD19 36
  • 98.97 (n)
  • 98.97 (a)
BTBD19 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia BTBD19 36
  • 88.66 (n)
  • 92.1 (a)
BTBD19 37
  • 92 (a)
OneToOne
dog
(Canis familiaris)
Mammalia BTBD19 37
  • 79 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Btbd19 16
Btbd19 37
  • 90 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia BTBD19 37
  • 31 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia BTBD19 37
  • 50 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia LOC100361234 36
  • 84.03 (n)
  • 89.16 (a)
chicken
(Gallus gallus)
Aves BTBD19 36
  • 60.48 (n)
  • 54.64 (a)
BTBD19 37
  • 55 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia BTBD19 37
  • 52 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia btbd19 36
  • 57.63 (n)
  • 52.01 (a)
zebrafish
(Danio rerio)
Actinopterygii btbd3a 37
  • 14 (a)
ManyToMany
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP010439 36
  • 40.28 (n)
  • 29.17 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG7102 36
  • 43.86 (n)
  • 31.05 (a)
CG7102 37
  • 14 (a)
OneToOne
Species with no ortholog for BTBD19:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for BTBD19 Gene

ENSEMBL:
Gene Tree for BTBD19 (if available)
TreeFam:
Gene Tree for BTBD19 (if available)

Paralogs for BTBD19 Gene

Paralogs for BTBD19 Gene

genes like me logo Genes that share paralogs with BTBD19: view

Variants for BTBD19 Gene

Sequence variations from dbSNP and Humsavar for BTBD19 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs3795717 -- 44,810,703(+) GGAAC(A/G)TGTGC intron-variant
rs3795718 -- 44,810,755(+) GGCAT(A/G)TATGT intron-variant
rs4073112 -- 44,812,422(+) CAAGC(C/T)GGGTC intron-variant
rs4399197 -- 44,812,692(+) AGACT(C/T)TGCCT intron-variant
rs6143210 -- 44,812,787(+) TCCAC(-/GTGTGTGTGTGTGTGTGTGTGT)GTGTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for BTBD19 Gene

Variant ID Type Subtype PubMed ID
nsv461406 CNV Loss 19166990
nsv870815 CNV Loss 21882294
nsv871320 CNV Loss 21882294
nsv870773 CNV Loss 21882294

Relevant External Links for BTBD19 Gene

HapMap Linkage Disequilibrium report
BTBD19

Disorders for BTBD19 Gene

No disorders were found for BTBD19 Gene.

No data available for UniProtKB/Swiss-Prot for BTBD19 Gene

Publications for BTBD19 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 4

Products for BTBD19 Gene

Sources for BTBD19 Gene

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