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Aliases for BTBD18 Gene

Aliases for BTBD18 Gene

  • BTB (POZ) Domain Containing 18 2 3
  • BTB/POZ Domain-Containing Protein 18 3
  • HCG1730474 3

External Ids for BTBD18 Gene

Summaries for BTBD18 Gene

GeneCards Summary for BTBD18 Gene

BTBD18 (BTB (POZ) Domain Containing 18) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BTBD18 Gene

Genomics for BTBD18 Gene

Genomic Location for BTBD18 Gene

Start:
57,743,514 bp from pter
End:
57,751,781 bp from pter
Size:
8,268 bases
Orientation:
Minus strand

Genomic View for BTBD18 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BTBD18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BTBD18 Gene

No data available for Regulatory Elements for BTBD18 Gene

Proteins for BTBD18 Gene

  • Protein details for BTBD18 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    B2RXH4-BTBDI_HUMAN
    Recommended name:
    BTB/POZ domain-containing protein 18
    Protein Accession:
    B2RXH4
    Secondary Accessions:

    Protein attributes for BTBD18 Gene

    Size:
    712 amino acids
    Molecular mass:
    77931 Da
    Quaternary structure:
    No Data Available

neXtProt entry for BTBD18 Gene

Proteomics data for BTBD18 Gene at MOPED

Post-translational modifications for BTBD18 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for BTBD18 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for BTBD18 Gene

Domains for BTBD18 Gene

Gene Families for BTBD18 Gene

HGNC:
  • BTBD :BTB/POZ domain containing

Protein Domains for BTBD18 Gene

InterPro:
ProtoNet:

UniProtKB/Swiss-Prot:

BTBDI_HUMAN
Domain:
  • Contains 1 BTB (POZ) domain.:
    • B2RXH4
genes like me logo Genes that share domains with BTBD18: view

Function for BTBD18 Gene

Gene Ontology (GO) - Molecular Function for BTBD18 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with BTBD18: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for BTBD18 Gene

Localization for BTBD18 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for BTBD18 Gene COMPARTMENTS Subcellular localization image for BTBD18 gene
Compartment Confidence
cytosol 2
mitochondrion 2
nucleus 2

No data available for Gene Ontology (GO) - Cellular Components for BTBD18 Gene

Pathways for BTBD18 Gene

SuperPathways for BTBD18 Gene

No Data Available

Interacting Proteins for BTBD18 Gene

Gene Ontology (GO) - Biological Process for BTBD18 Gene

None

No data available for Pathways by source for BTBD18 Gene

Transcripts for BTBD18 Gene

mRNA/cDNA for BTBD18 Gene

(5) REFSEQ mRNAs :
(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BTBD18 Gene

BTB (POZ) domain containing 18:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BTBD18 Gene

No ASD Table

Relevant External Links for BTBD18 Gene

GeneLoc Exon Structure for
BTBD18
ECgene alternative splicing isoforms for
BTBD18

Expression for BTBD18 Gene

mRNA expression in normal human tissues for BTBD18 Gene

mRNA differential expression in normal tissues according to GTEx for BTBD18 Gene

This gene is overexpressed in Testis (17.9).

Integrated Proteomics: protein expression from ProteomicsDB and MOPED for BTBD18 Gene

SOURCE GeneReport for Unigene cluster for BTBD18 Gene Hs.606355

genes like me logo Genes that share expressions with BTBD18: view

Orthologs for BTBD18 Gene

This gene was present in the common ancestor of chordates.

Orthologs for BTBD18 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia BTBD18 36
  • 99.44 (n)
  • 99.02 (a)
BTBD18 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia BTBD18 37
  • 76 (a)
OneToOne
dog
(Canis familiaris)
Mammalia BTBD18 36
  • 85.94 (n)
  • 83.92 (a)
BTBD18 37
  • 84 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm13718 36
  • 81.91 (n)
  • 77.41 (a)
Gm13718 16
oppossum
(Monodelphis domestica)
Mammalia BTBD18 37
  • 54 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Btbd18 36
  • 82.32 (n)
  • 78.01 (a)
lizard
(Anolis carolinensis)
Reptilia BTBD18 37
  • 48 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii BTBD18 (1 of 2) 37
  • 41 (a)
OneToMany
CT033803.1 37
  • 26 (a)
OneToMany
Species with no ortholog for BTBD18:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for BTBD18 Gene

ENSEMBL:
Gene Tree for BTBD18 (if available)
TreeFam:
Gene Tree for BTBD18 (if available)

Paralogs for BTBD18 Gene

Selected SIMAP similar genes for BTBD18 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with BTBD18: view

No data available for Paralogs for BTBD18 Gene

Variants for BTBD18 Gene

Sequence variations from dbSNP and Humsavar for BTBD18 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
VAR_063155 -
VAR_063156 -

Structural Variations from Database of Genomic Variants (DGV) for BTBD18 Gene

Variant ID Type Subtype PubMed ID
nsv832164 CNV Loss 17160897
nsv508633 CNV Loss 20534489
nsv326 CNV Insertion 18451855

Relevant External Links for BTBD18 Gene

HapMap Linkage Disequilibrium report
BTBD18

Disorders for BTBD18 Gene

No disorders were found for BTBD18 Gene.

No data available for UniProtKB/Swiss-Prot for BTBD18 Gene

Publications for BTBD18 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4
  4. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor T.D. … Sakaki Y. (Nature 2006) 4

Products for BTBD18 Gene

Sources for BTBD18 Gene

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