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Aliases for BSN-AS2 Gene

Subcategory (RNA class) for BSN-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for BSN-AS2 Gene

  • BSN Antisense RNA 2 (Head To Head) 2 3 5
  • BSN Antisense RNA 2 (Non-Protein Coding) 2

External Ids for BSN-AS2 Gene

Summaries for BSN-AS2 Gene

GeneCards Summary for BSN-AS2 Gene

BSN-AS2 (BSN Antisense RNA 2 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BSN-AS2 Gene

Genomics for BSN-AS2 Gene

Regulatory Elements for BSN-AS2 Gene

Enhancers for BSN-AS2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around BSN-AS2 on UCSC Golden Path with GeneCards custom track

Promoters for BSN-AS2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around BSN-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for BSN-AS2 Gene

Chromosome:
3
Start:
49,549,306 bp from pter
End:
49,554,366 bp from pter
Size:
5,061 bases
Orientation:
Minus strand

Genomic View for BSN-AS2 Gene

Genes around BSN-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BSN-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BSN-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BSN-AS2 Gene

Proteins for BSN-AS2 Gene

Post-translational modifications for BSN-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BSN-AS2 Gene

Domains & Families for BSN-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BSN-AS2 Gene

Function for BSN-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BSN-AS2 Gene

Localization for BSN-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BSN-AS2 Gene

Pathways & Interactions for BSN-AS2 Gene

SuperPathways for BSN-AS2 Gene

No Data Available

Interacting Proteins for BSN-AS2 Gene

Gene Ontology (GO) - Biological Process for BSN-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BSN-AS2 Gene

Drugs & Compounds for BSN-AS2 Gene

No Compound Related Data Available

Transcripts for BSN-AS2 Gene

mRNA/cDNA for BSN-AS2 Gene

(3) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BSN-AS2 Gene

BSN antisense RNA 2 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BSN-AS2 Gene

No ASD Table

Relevant External Links for BSN-AS2 Gene

GeneLoc Exon Structure for
BSN-AS2
ECgene alternative splicing isoforms for
BSN-AS2

Expression for BSN-AS2 Gene

mRNA expression in normal human tissues for BSN-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for BSN-AS2 Gene

This gene is overexpressed in Testis (x17.6).

SOURCE GeneReport for Unigene cluster for BSN-AS2 Gene Hs.435651

genes like me logo Genes that share expression patterns with BSN-AS2: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for BSN-AS2 Gene

Orthologs for BSN-AS2 Gene

Evolution for BSN-AS2 Gene

ENSEMBL:
Gene Tree for BSN-AS2 (if available)
TreeFam:
Gene Tree for BSN-AS2 (if available)

No data available for Orthologs for BSN-AS2 Gene

Paralogs for BSN-AS2 Gene

No data available for Paralogs for BSN-AS2 Gene

Variants for BSN-AS2 Gene

Sequence variations from dbSNP and Humsavar for BSN-AS2 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs59579780 -- 49,549,778(+) TGCCT(G/T)GGCCT nc-transcript-variant
rs34039576 -- 49,551,409(+) GGCCA(-/TC)TCCAA nc-transcript-variant
rs73831439 -- 49,551,553(+) AGGAG(A/G)ACATG intron-variant
rs35883547 -- 49,550,676(+) TGGAT(-/A)CTCGT nc-transcript-variant
rs75470186 -- 49,549,267(+) AAACA(C/G)ACATG downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for BSN-AS2 Gene

Variant ID Type Subtype PubMed ID
nsv834687 CNV Loss 17160897

Relevant External Links for BSN-AS2 Gene

HapMap Linkage Disequilibrium report
BSN-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for BSN-AS2 Gene

Disorders for BSN-AS2 Gene

Relevant External Links for BSN-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BSN-AS2

No disorders were found for BSN-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BSN-AS2 Gene

Publications for BSN-AS2 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 67

Products for BSN-AS2 Gene

Sources for BSN-AS2 Gene

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