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Aliases for BRE-AS1 Gene

Subcategory (RNA class) for BRE-AS1 Gene


Quality Score for this RNA gene is


Aliases for BRE-AS1 Gene

  • BRE Antisense RNA 1 2 3
  • BRE Antisense RNA 1 (Non-Protein Coding) 2

External Ids for BRE-AS1 Gene

ORGUL Members for BRE-AS1 Gene

Previous GeneCards Identifiers for BRE-AS1 Gene

  • GC02M028113

Summaries for BRE-AS1 Gene

GeneCards Summary for BRE-AS1 Gene

BRE-AS1 (BRE Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

Additional gene information for BRE-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BRE-AS1 Gene

Genomics for BRE-AS1 Gene

Regulatory Elements for BRE-AS1 Gene

Enhancers for BRE-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H027893 0.5 FANTOM5 dbSUPER 0.7 -2.1 -2120 0.3 BRE-AS1 LOC100420770
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BRE-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for BRE-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Locations for BRE-AS1 Gene

Genomic Locations for BRE-AS1 Gene
1,659 bases
Minus strand

Genomic View for BRE-AS1 Gene

Genes around BRE-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BRE-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BRE-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BRE-AS1 Gene

Proteins for BRE-AS1 Gene

Post-translational modifications for BRE-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BRE-AS1 Gene

Domains & Families for BRE-AS1 Gene

Gene Families for BRE-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with BRE-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BRE-AS1 Gene

Function for BRE-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BRE-AS1 Gene

Localization for BRE-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BRE-AS1 Gene

Pathways & Interactions for BRE-AS1 Gene

SuperPathways for BRE-AS1 Gene

No Data Available

Interacting Proteins for BRE-AS1 Gene

Gene Ontology (GO) - Biological Process for BRE-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for BRE-AS1 Gene

Drugs & Compounds for BRE-AS1 Gene

No Compound Related Data Available

Transcripts for BRE-AS1 Gene

mRNA/cDNA for BRE-AS1 Gene

(2) Additional mRNA sequences :

Unigene Clusters for BRE-AS1 Gene

BRE antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BRE-AS1 Gene

No ASD Table

Relevant External Links for BRE-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for BRE-AS1 Gene

SOURCE GeneReport for Unigene cluster for BRE-AS1 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BRE-AS1 Gene

Orthologs for BRE-AS1 Gene

No data available for Orthologs and Evolution for BRE-AS1 Gene

Paralogs for BRE-AS1 Gene

No data available for Paralogs for BRE-AS1 Gene

Variants for BRE-AS1 Gene

Sequence variations from dbSNP and Humsavar for BRE-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000150176 -- 27,891,731(+) CACCT(C/T)CTCAT intron-variant, upstream-variant-2KB
rs1003695720 -- 27,892,912(+) AATCT(C/T)GAAGA intron-variant, upstream-variant-2KB
rs1003725406 -- 27,892,624(+) TTATA(A/G)TAATT intron-variant, upstream-variant-2KB
rs1004735826 -- 27,892,535(+) GACAT(A/C)GACAT intron-variant, upstream-variant-2KB
rs1005265562 -- 27,892,990(+) TAAAT(G/T)TATTA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for BRE-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2759034 CNV gain 17122850

Relevant External Links for BRE-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for BRE-AS1 Gene

Disorders for BRE-AS1 Gene

Relevant External Links for BRE-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for BRE-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BRE-AS1 Gene

Publications for BRE-AS1 Gene

  1. Networks of Cultured iPSC-Derived Neurons Reveal the Human Synaptic Activity-Regulated Adaptive Gene Program. (PMID: 28052243) Pruunsild P … Bading H (Cell reports 2017) 2 3 60
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60
  3. Pan-genome isolation of low abundance transcripts using SAGE tag. (PMID: 17113583) Kim YC … Wang SM (FEBS letters 2006) 3 60
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for BRE-AS1 Gene

Sources for BRE-AS1 Gene

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