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Aliases for BRDTP1 Gene

Aliases for BRDTP1 Gene

  • Bromodomain Testis Associated Pseudogene 1 2 3 5
  • Bromodomain, Testis-Specific Pseudogene 1 2 3
  • HCG1811337 3

External Ids for BRDTP1 Gene

Summaries for BRDTP1 Gene

GeneCards Summary for BRDTP1 Gene

BRDTP1 (Bromodomain Testis Associated Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BRDTP1 Gene

Genomics for BRDTP1 Gene

Regulatory Elements for BRDTP1 Gene

Enhancers for BRDTP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG096243 0.5 ENCODE 0.1 +92.5 92499 3.3 SOX5 SOX13 TFAP4 ATF1 RPS29P28 BRDTP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BRDTP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for BRDTP1 Gene

Chromosome:
X
Start:
96,337,086 bp from pter
End:
96,337,912 bp from pter
Size:
827 bases
Orientation:
Minus strand

Genomic View for BRDTP1 Gene

Genes around BRDTP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BRDTP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BRDTP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BRDTP1 Gene

Proteins for BRDTP1 Gene

Post-translational modifications for BRDTP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BRDTP1 Gene

Domains & Families for BRDTP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BRDTP1 Gene

Function for BRDTP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BRDTP1 Gene

Localization for BRDTP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BRDTP1 Gene

Pathways & Interactions for BRDTP1 Gene

SuperPathways for BRDTP1 Gene

No Data Available

Interacting Proteins for BRDTP1 Gene

Gene Ontology (GO) - Biological Process for BRDTP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BRDTP1 Gene

Drugs & Compounds for BRDTP1 Gene

No Compound Related Data Available

Transcripts for BRDTP1 Gene

mRNA/cDNA for BRDTP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BRDTP1 Gene

No ASD Table

Relevant External Links for BRDTP1 Gene

GeneLoc Exon Structure for
BRDTP1
ECgene alternative splicing isoforms for
BRDTP1

Expression for BRDTP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BRDTP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of BRDTP1 Gene:

BRDTP1
genes like me logo Genes that share expression patterns with BRDTP1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BRDTP1 Gene

Orthologs for BRDTP1 Gene

Evolution for BRDTP1 Gene

ENSEMBL:
Gene Tree for BRDTP1 (if available)
TreeFam:
Gene Tree for BRDTP1 (if available)

No data available for Orthologs for BRDTP1 Gene

Paralogs for BRDTP1 Gene

No data available for Paralogs for BRDTP1 Gene

Variants for BRDTP1 Gene

Sequence variations from dbSNP and Humsavar for BRDTP1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs1001147293 -- 96,338,392(+) TCCTA(C/T)CCATG upstream-variant-2KB
rs1002834097 -- 96,339,885(+) TTGAG(A/C)TCTTT upstream-variant-2KB
rs1004537766 -- 96,337,467(+) CAATT(A/T)ATTTC nc-transcript-variant
rs1005016430 -- 96,337,924(+) ATCCA(C/T)CTTGA upstream-variant-2KB
rs1006620478 -- 96,339,428(+) GGTTG(A/G)TATGC upstream-variant-2KB

Relevant External Links for BRDTP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BRDTP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BRDTP1 Gene

Disorders for BRDTP1 Gene

Relevant External Links for BRDTP1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BRDTP1

No disorders were found for BRDTP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BRDTP1 Gene

Publications for BRDTP1 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for BRDTP1 Gene

Sources for BRDTP1 Gene

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