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Aliases for BRD7P3 Gene

Aliases for BRD7P3 Gene

  • Bromodomain Containing 7 Pseudogene 3 2 3
  • Bromodomain Containing Protein 75 KDa Pseudogene 3
  • RP3-509L4.3 5
  • BP75 3

External Ids for BRD7P3 Gene

Previous GeneCards Identifiers for BRD7P3 Gene

  • GC06P118931
  • GC06P118932
  • GC06P118822
  • GC06P116404

Summaries for BRD7P3 Gene

GeneCards Summary for BRD7P3 Gene

BRD7P3 (Bromodomain Containing 7 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BRD7P3 Gene

Genomics for BRD7P3 Gene

Regulatory Elements for BRD7P3 Gene

Enhancers for BRD7P3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G118536 1.7 VISTA FANTOM5 dbSUPER 0.3 +36.0 35955 2.6 HDAC1 PKNOX1 ATF1 TBL1XR1 CHAMP1 TCF12 ZNF766 GATA2 CREM ZEB2 PLN SSXP10 BRD7P3
GH06G118505 0.8 dbSUPER 0.4 +5.8 5769 3.7 CTCF TAL1 CEBPG RAD21 IRF9 TCF12 ZNF316 NCOR1 NFE2 TRIM24 SSXP10 CEP85L BRD7P3 PLN
GH06G118469 0.8 ENCODE 0.3 -32.1 -32121 0.2 FOXA2 NFIB FEZF1 ZNF366 MIXL1 HMG20B ZNF843 KAT8 NFIC KLF16 LOC105377971 BRD7P3
GH06G118495 0.5 ENCODE 0.4 -5.5 -5493 1.0 ZNF146 JUND JUN FOS BRD7P3 LOC105377971
GH06G118509 0.5 dbSUPER 0.4 +8.3 8294 1.3 CTCF ZNF654 RAD51 SMC3 RAD21 CEP85L BRD7P3 PLN
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BRD7P3 on UCSC Golden Path with GeneCards custom track

Genomic Location for BRD7P3 Gene

Chromosome:
6
Start:
118,501,373 bp from pter
End:
118,503,846 bp from pter
Size:
2,474 bases
Orientation:
Plus strand

Genomic View for BRD7P3 Gene

Genes around BRD7P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BRD7P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BRD7P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BRD7P3 Gene

Proteins for BRD7P3 Gene

Post-translational modifications for BRD7P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BRD7P3 Gene

Domains & Families for BRD7P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BRD7P3 Gene

Function for BRD7P3 Gene

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BRD7P3 Gene

Localization for BRD7P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BRD7P3 Gene

Pathways & Interactions for BRD7P3 Gene

SuperPathways for BRD7P3 Gene

No Data Available

Interacting Proteins for BRD7P3 Gene

Gene Ontology (GO) - Biological Process for BRD7P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BRD7P3 Gene

Drugs & Compounds for BRD7P3 Gene

No Compound Related Data Available

Transcripts for BRD7P3 Gene

mRNA/cDNA for BRD7P3 Gene

(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BRD7P3 Gene

Bromodomain containing 7 pseudogene 3:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for BRD7P3 Gene

No ASD Table

Relevant External Links for BRD7P3 Gene

GeneLoc Exon Structure for
BRD7P3
ECgene alternative splicing isoforms for
BRD7P3

Expression for BRD7P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BRD7P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of BRD7P3 Gene:

BRD7P3

SOURCE GeneReport for Unigene cluster for BRD7P3 Gene:

Hs.648050
genes like me logo Genes that share expression patterns with BRD7P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BRD7P3 Gene

Orthologs for BRD7P3 Gene

Evolution for BRD7P3 Gene

ENSEMBL:
Gene Tree for BRD7P3 (if available)
TreeFam:
Gene Tree for BRD7P3 (if available)

No data available for Orthologs for BRD7P3 Gene

Paralogs for BRD7P3 Gene

No data available for Paralogs for BRD7P3 Gene

Variants for BRD7P3 Gene

Sequence variations from dbSNP and Humsavar for BRD7P3 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1001107669 -- 118,502,306(+) GAAGA(C/T)TGATC intron-variant, nc-transcript-variant
rs1001989064 -- 118,504,087(+) ACAAA(C/T)AATAG intron-variant, downstream-variant-500B
rs1002359712 -- 118,504,337(+) ATCAC(C/T)GCACT intron-variant, downstream-variant-500B
rs1003512055 -- 118,504,079(+) CAAAA(C/T)GTACA intron-variant, downstream-variant-500B
rs1004064987 -- 118,501,106(+) GAGCA(A/G)TGCTC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for BRD7P3 Gene

Variant ID Type Subtype PubMed ID
dgv10918n54 CNV gain 21841781
dgv10919n54 CNV gain 21841781
dgv1213e214 CNV gain 21293372
dgv1826e212 CNV gain 25503493
esv3610513 CNV loss 21293372
esv3890931 CNV gain 25118596
nsv1019357 CNV gain 25217958
nsv1020463 CNV gain 25217958
nsv1020586 CNV gain 25217958
nsv1034448 CNV gain 25217958
nsv1161446 CNV duplication 26073780
nsv464029 CNV gain 19166990
nsv525179 CNV gain 19592680
nsv604555 CNV gain 21841781

Relevant External Links for BRD7P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BRD7P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for BRD7P3 Gene

Disorders for BRD7P3 Gene

Relevant External Links for BRD7P3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BRD7P3

No disorders were found for BRD7P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BRD7P3 Gene

Publications for BRD7P3 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64
  2. Identification and molecular characterization of BP75, a novel bromodomain-containing protein. (PMID: 10526152) Cuppen E. … Hendriks W. (FEBS Lett. 1999) 3 64

Products for BRD7P3 Gene

Sources for BRD7P3 Gene

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