Free for academic non-profit institutions. Other users need a Commercial license

Aliases for BPIFB9P Gene

Aliases for BPIFB9P Gene

  • BPI Fold Containing Family B Member 9, Pseudogene 2 3 5
  • Chromosome 20 Open Reading Frame 115 2
  • DJ1187J4.2 3
  • DJ1187J4.3 3
  • C20orf115 3

External Ids for BPIFB9P Gene

Previous HGNC Symbols for BPIFB9P Gene

  • C20orf115

Previous GeneCards Identifiers for BPIFB9P Gene

  • GC20U900699
  • GC20P031937

Summaries for BPIFB9P Gene

GeneCards Summary for BPIFB9P Gene

BPIFB9P (BPI Fold Containing Family B Member 9, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BPIFB9P Gene

Genomics for BPIFB9P Gene

Regulatory Elements for BPIFB9P Gene

Enhancers for BPIFB9P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G033517 1.2 Ensembl ENCODE dbSUPER 4.3 +171.3 171267 1.2 RNF2 JUN INSM2 KLF17 ZEB2 OSR2 CBX8 PRDM6 BCL11A GLIS1 CBFA2T2 SNTA1 AHCY BPIFB9P GC20P033491 GC20P033492 GC20P033562
GH20G033602 0.8 ENCODE 4.2 +255.9 255885 0.9 NFIB ZNF335 RELB PCBP1 IKZF2 PAF1 CBFB JUNB CEBPB ZNF398 BPIFB9P GC20M033592 PIR38759
GH20G033339 1 ENCODE 0.4 -7.4 -7411 0.2 ATF1 MLX ARNT ZNF48 TCF12 SLC30A9 ZNF766 GATA2 SP5 ZHX2 BPIFA1 BPIFB9P BPIFB5P
GH20G033351 0.5 ENCODE 0.7 +4.9 4871 0.9 SOX5 SOX13 PRDM1 TEAD3 CBFA2T2 BPIFA1 BPIFB9P GC20P033389
GH20G033368 1 ENCODE 0.3 +24.9 24907 6.1 FOXA2 MLX ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF207 FOS SP5 SNTA1 PXMP4 ENSG00000229188 ZNF341 BPIFA1 CBFA2T2 AHCY GC20P033389 BPIFB9P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BPIFB9P on UCSC Golden Path with GeneCards custom track

Genomic Location for BPIFB9P Gene

Chromosome:
20
Start:
33,347,120 bp from pter
End:
33,355,044 bp from pter
Size:
7,925 bases
Orientation:
Plus strand

Genomic View for BPIFB9P Gene

Genes around BPIFB9P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BPIFB9P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BPIFB9P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BPIFB9P Gene

Proteins for BPIFB9P Gene

Post-translational modifications for BPIFB9P Gene

No Post-translational modifications

No data available for DME Specific Peptides for BPIFB9P Gene

Domains & Families for BPIFB9P Gene

Gene Families for BPIFB9P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with BPIFB9P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BPIFB9P Gene

Function for BPIFB9P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BPIFB9P Gene

Localization for BPIFB9P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BPIFB9P Gene

Pathways & Interactions for BPIFB9P Gene

SuperPathways for BPIFB9P Gene

No Data Available

Interacting Proteins for BPIFB9P Gene

Gene Ontology (GO) - Biological Process for BPIFB9P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BPIFB9P Gene

Drugs & Compounds for BPIFB9P Gene

No Compound Related Data Available

Transcripts for BPIFB9P Gene

mRNA/cDNA for BPIFB9P Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BPIFB9P Gene

No ASD Table

Relevant External Links for BPIFB9P Gene

GeneLoc Exon Structure for
BPIFB9P
ECgene alternative splicing isoforms for
BPIFB9P

Expression for BPIFB9P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BPIFB9P Gene

mRNA differential expression in normal tissues according to GTEx for BPIFB9P Gene

This gene is overexpressed in Brain - Cortex (x4.8).

NURSA nuclear receptor signaling pathways regulating expression of BPIFB9P Gene:

BPIFB9P
genes like me logo Genes that share expression patterns with BPIFB9P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BPIFB9P Gene

Orthologs for BPIFB9P Gene

Evolution for BPIFB9P Gene

ENSEMBL:
Gene Tree for BPIFB9P (if available)
TreeFam:
Gene Tree for BPIFB9P (if available)

No data available for Orthologs for BPIFB9P Gene

Paralogs for BPIFB9P Gene

No data available for Paralogs for BPIFB9P Gene

Variants for BPIFB9P Gene

Relevant External Links for BPIFB9P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BPIFB9P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BPIFB9P Gene

Disorders for BPIFB9P Gene

No disorders were found for BPIFB9P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BPIFB9P Gene

Publications for BPIFB9P Gene

  1. Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. (PMID: 21787333) Bingle C.D. … Craven C.J. (Biochem. Soc. Trans. 2011) 3 64
  2. Distant cousins: genomic and sequence diversity within the BPI fold-containing (BPIF)/PLUNC protein family. (PMID: 21787330) Bingle C.D. … Craven C.J. (Biochem. Soc. Trans. 2011) 3 64

Products for BPIFB9P Gene

Sources for BPIFB9P Gene

Content
Loading form....