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Aliases for BPIFB9P Gene

Aliases for BPIFB9P Gene

  • BPI Fold Containing Family B, Member 9, Pseudogene 2 3
  • Chromosome 20 Open Reading Frame 115 2
  • DJ1187J4.2 3
  • DJ1187J4.3 3
  • C20orf115 3

External Ids for BPIFB9P Gene

Previous HGNC Symbols for BPIFB9P Gene

  • C20orf115

Previous GeneCards Identifiers for BPIFB9P Gene

  • GC20U900699
  • GC20P031937

Summaries for BPIFB9P Gene

GeneCards Summary for BPIFB9P Gene

BPIFB9P (BPI Fold Containing Family B, Member 9, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BPIFB9P Gene

Genomics for BPIFB9P Gene

Genomic Location for BPIFB9P Gene

Start:
33,347,120 bp from pter
End:
33,355,044 bp from pter
Size:
7,925 bases
Orientation:
Plus strand

Genomic View for BPIFB9P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BPIFB9P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BPIFB9P Gene

No data available for Regulatory Elements for BPIFB9P Gene

Proteins for BPIFB9P Gene

Post-translational modifications for BPIFB9P Gene

No Post-translational modifications

No data available for DME Specific Peptides for BPIFB9P Gene

Domains for BPIFB9P Gene

Gene Families for BPIFB9P Gene

HGNC:
  • BPIF :BPI fold containing

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with BPIFB9P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BPIFB9P Gene

Function for BPIFB9P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for BPIFB9P Gene

Localization for BPIFB9P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BPIFB9P Gene

Pathways for BPIFB9P Gene

SuperPathways for BPIFB9P Gene

No Data Available

Interacting Proteins for BPIFB9P Gene

Gene Ontology (GO) - Biological Process for BPIFB9P Gene

None

No data available for Pathways by source for BPIFB9P Gene

Transcripts for BPIFB9P Gene

mRNA/cDNA for BPIFB9P Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BPIFB9P Gene

No ASD Table

Relevant External Links for BPIFB9P Gene

GeneLoc Exon Structure for
BPIFB9P
ECgene alternative splicing isoforms for
BPIFB9P

Expression for BPIFB9P Gene

mRNA expression in normal human tissues for BPIFB9P Gene

mRNA differential expression in normal tissues according to GTEx for BPIFB9P Gene

This gene is overexpressed in Brain - Cortex (4.8).
genes like me logo Genes that share expressions with BPIFB9P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for BPIFB9P Gene

Orthologs for BPIFB9P Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for BPIFB9P Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Bpifb9a 16
Species with no ortholog for BPIFB9P:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for BPIFB9P Gene

ENSEMBL:
Gene Tree for BPIFB9P (if available)
TreeFam:
Gene Tree for BPIFB9P (if available)

Paralogs for BPIFB9P Gene

No data available for Paralogs for BPIFB9P Gene

Variants for BPIFB9P Gene

Relevant External Links for BPIFB9P Gene

HapMap Linkage Disequilibrium report
BPIFB9P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for BPIFB9P Gene

Disorders for BPIFB9P Gene

No disorders were found for BPIFB9P Gene.

No data available for UniProtKB/Swiss-Prot for BPIFB9P Gene

Publications for BPIFB9P Gene

  1. Distant cousins: genomic and sequence diversity within the BPI fold-containing (BPIF)/PLUNC protein family. (PMID: 21787330) Bingle C.D. … Craven C.J. (Biochem. Soc. Trans. 2011) 3
  2. Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. (PMID: 21787333) Bingle C.D. … Craven C.J. (Biochem. Soc. Trans. 2011) 3

Products for BPIFB9P Gene

Sources for BPIFB9P Gene

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