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Aliases for BPIFB5P Gene

Aliases for BPIFB5P Gene

  • BPI Fold Containing Family B Member 5, Pseudogene 2 3 5

External Ids for BPIFB5P Gene

Previous GeneCards Identifiers for BPIFB5P Gene

  • GC20U900686
  • GC20P031905

Summaries for BPIFB5P Gene

GeneCards Summary for BPIFB5P Gene

BPIFB5P (BPI Fold Containing Family B Member 5, Pseudogene) is a Pseudogene.

Additional gene information for BPIFB5P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BPIFB5P Gene

Genomics for BPIFB5P Gene

Regulatory Elements for BPIFB5P Gene

Enhancers for BPIFB5P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20H032559 1.5 Ensembl ENCODE dbSUPER 14.6 -755.6 -755606 3 PKNOX1 FOXA2 MLX ARID4B DMAP1 SLC30A9 GLIS2 KLF7 RUNX3 SP3 SUN5 BPIFA3 ENSG00000224876 BPIFB5P RPL12P3 RNU1-94P ASXL1 CDK5RAP1 TM9SF4 PDRG1
GH20H033991 1.4 ENCODE dbSUPER 14.6 +677.2 677179 4 HDGF PKNOX1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ENSG00000228386 ENSG00000229188 BPIFB5P BPIFA3 ENSG00000224876 SUN5 RPL12P3 RPS2P1 CDK5RAP1 ENSG00000272945
GH20H033400 1.2 ENCODE 14.7 +84.5 84494 2 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 SP3 NFYC CDK5RAP1 BPIFB5P RPL12P3 BPIFA3 ENSG00000224876 ENSG00000229188 SUN5 ENSG00000228386 ZNF341-AS1 RPS2P1
GH20H034300 1.2 ENCODE 14.6 +985.4 985377 3 HDGF FOXA2 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 ENSG00000228386 ENSG00000229188 BPIFB5P NCOA6 CDK5RAP1 RPS2P1 CBFA2T2 TRPC4AP EIF6 AHCY
GH20H033684 1.1 ENCODE 14.6 +369.0 369032 2 HDGF MLX ARID4B SIN3A DMAP1 SLC30A9 ZNF143 FOS SP3 CEBPZ ZNF341-AS1 ENSG00000229188 ENSG00000228386 BPIFB5P RPL12P3 BPIFA3 ENSG00000224876 SUN5 EIF2S2 RPS2P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BPIFB5P on UCSC Golden Path with GeneCards custom track

Genomic Location for BPIFB5P Gene

Chromosome:
20
Start:
33,316,869 bp from pter
End:
33,329,969 bp from pter
Size:
13,101 bases
Orientation:
Plus strand

Genomic View for BPIFB5P Gene

Genes around BPIFB5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BPIFB5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BPIFB5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BPIFB5P Gene

Proteins for BPIFB5P Gene

Post-translational modifications for BPIFB5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for BPIFB5P Gene

Domains & Families for BPIFB5P Gene

Gene Families for BPIFB5P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with BPIFB5P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BPIFB5P Gene

Function for BPIFB5P Gene

Phenotypes From GWAS Catalog for BPIFB5P Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for BPIFB5P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BPIFB5P Gene

Localization for BPIFB5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BPIFB5P Gene

Pathways & Interactions for BPIFB5P Gene

SuperPathways for BPIFB5P Gene

No Data Available

Interacting Proteins for BPIFB5P Gene

Gene Ontology (GO) - Biological Process for BPIFB5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BPIFB5P Gene

Drugs & Compounds for BPIFB5P Gene

No Compound Related Data Available

Transcripts for BPIFB5P Gene

mRNA/cDNA for BPIFB5P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for BPIFB5P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for BPIFB5P Gene

No ASD Table

Relevant External Links for BPIFB5P Gene

GeneLoc Exon Structure for
BPIFB5P
ECgene alternative splicing isoforms for
BPIFB5P

Expression for BPIFB5P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BPIFB5P Gene

NURSA nuclear receptor signaling pathways regulating expression of BPIFB5P Gene:

BPIFB5P
genes like me logo Genes that share expression patterns with BPIFB5P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BPIFB5P Gene

Orthologs for BPIFB5P Gene

Evolution for BPIFB5P Gene

ENSEMBL:
Gene Tree for BPIFB5P (if available)
TreeFam:
Gene Tree for BPIFB5P (if available)

No data available for Orthologs for BPIFB5P Gene

Paralogs for BPIFB5P Gene

No data available for Paralogs for BPIFB5P Gene

Variants for BPIFB5P Gene

Relevant External Links for BPIFB5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BPIFB5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BPIFB5P Gene

Disorders for BPIFB5P Gene

No disorders were found for BPIFB5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BPIFB5P Gene

Publications for BPIFB5P Gene

  1. Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. (PMID: 21787333) Bingle CD … Craven CJ (Biochemical Society transactions 2011) 2 3 60
  2. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang ZD … Gerstein M (Genome biology 2010) 3 60
  3. Meet the relatives: a family of BPI- and LBP-related proteins. (PMID: 15106612) Bingle CD … Craven CJ (Trends in immunology 2004) 3 60
  4. Comparative analysis of the PLUNC (palate, lung and nasal epithelium clone) protein families. (PMID: 12887310) Bingle CD … Craven CJ (Biochemical Society transactions 2003) 3 60

Products for BPIFB5P Gene

Sources for BPIFB5P Gene

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