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Aliases for BPIFA4P Gene

Aliases for BPIFA4P Gene

  • BPI Fold Containing Family A, Member 4, Pseudogene 2 3 4
  • BASE 3 4 6
  • PLUNC Family Pseudogene 2 3
  • Gene Expressed Only In The Salivary Gland And Breast Cancers 3
  • Breast Cancer And Salivary Gland-Expressed Protein 4
  • Breast Cancer And Salivary Gland Expression Gene 2
  • Breast Cancer And Salivary Gland Expression 3
  • Putative Latherin 4
  • LATH 4

External Ids for BPIFA4P Gene

Previous GeneCards Identifiers for BPIFA4P Gene

  • GC20P031784

Summaries for BPIFA4P Gene

GeneCards Summary for BPIFA4P Gene

BPIFA4P (BPI Fold Containing Family A, Member 4, Pseudogene) is a Pseudogene. Diseases associated with BPIFA4P include breast cancer.

UniProtKB/Swiss-Prot for BPIFA4P Gene

  • Major protein in sweat, has surfactant properties.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BPIFA4P Gene

Genomics for BPIFA4P Gene

Genomic Location for BPIFA4P Gene

33,193,585 bp from pter
33,210,462 bp from pter
16,878 bases
Plus strand

Genomic View for BPIFA4P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BPIFA4P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BPIFA4P Gene

No data available for Regulatory Elements for BPIFA4P Gene

Proteins for BPIFA4P Gene

  • Protein details for BPIFA4P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative BPIFA4P protein
    Protein Accession:
    Secondary Accessions:

    Protein attributes for BPIFA4P Gene

    179 amino acids
    Molecular mass:
    19456 Da
    Quaternary structure:
    No Data Available

neXtProt entry for BPIFA4P Gene

Proteomics data for BPIFA4P Gene at MOPED

Post-translational modifications for BPIFA4P Gene

No Post-translational modifications

No data available for DME Specific Peptides for BPIFA4P Gene

Domains for BPIFA4P Gene

Gene Families for BPIFA4P Gene

  • BPIF :BPI fold containing

Protein Domains for BPIFA4P Gene


Graphical View of Domain Structure for InterPro Entry



  • Q86YQ2
  • Belongs to the BPI/LBP/Plunc superfamily. Plunc family.
genes like me logo Genes that share domains with BPIFA4P: view

No data available for Suggested Antigen Peptide Sequences for BPIFA4P Gene

Function for BPIFA4P Gene

Molecular function for BPIFA4P Gene

UniProtKB/Swiss-Prot Function:
Major protein in sweat, has surfactant properties.

Phenotypes for BPIFA4P Gene

GenomeRNAi human phenotypes for BPIFA4P:
genes like me logo Genes that share phenotypes with BPIFA4P: view

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for BPIFA4P Gene

Localization for BPIFA4P Gene

Subcellular locations from UniProtKB/Swiss-Prot for BPIFA4P Gene


No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BPIFA4P Gene

Pathways for BPIFA4P Gene

SuperPathways for BPIFA4P Gene

No Data Available

Interacting Proteins for BPIFA4P Gene

Gene Ontology (GO) - Biological Process for BPIFA4P Gene


No data available for Pathways by source for BPIFA4P Gene

Transcripts for BPIFA4P Gene

mRNA/cDNA for BPIFA4P Gene

(6) Selected AceView cDNA sequences:
(8) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BPIFA4P Gene

BPI fold containing family A, member 4, pseudogene:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for BPIFA4P

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for BPIFA4P Gene

ExUns: 1a · 1b ^ 2a · 2b · 2c ^ 3a · 3b · 3c ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9
SP1: - -
SP2: -
SP3: - - -

Relevant External Links for BPIFA4P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for BPIFA4P Gene

mRNA expression in normal human tissues for BPIFA4P Gene

mRNA differential expression in normal tissues according to GTEx for BPIFA4P Gene

This gene is overexpressed in Testis (19.7) and Prostate (18.6).

SOURCE GeneReport for Unigene cluster for BPIFA4P Gene Hs.434194

mRNA Expression by UniProt/SwissProt for BPIFA4P Gene

Tissue specificity: Expressed in breast cancer and salivary gland.
genes like me logo Genes that share expressions with BPIFA4P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression and Expression partners for BPIFA4P Gene

Orthologs for BPIFA4P Gene

Evolution for BPIFA4P Gene

Gene Tree for BPIFA4P (if available)
Gene Tree for BPIFA4P (if available)

No data available for Orthologs for BPIFA4P Gene

Paralogs for BPIFA4P Gene

No data available for Paralogs for BPIFA4P Gene

Variants for BPIFA4P Gene

Sequence variations from dbSNP and Humsavar for BPIFA4P Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type MAF
rs735624 -- 33,205,135(+) CCAGC(A/G)CAAAA nc-transcript-variant
rs735625 -- 33,205,198(+) TGGGA(C/T)GAAAA nc-transcript-variant
rs735626 -- 33,205,396(+) TTATT(C/T)AGGTC intron-variant
rs911139 -- 33,205,263(+) GGGAG(G/T)TTGGA intron-variant
rs1040795 -- 33,191,941(+) TAAGA(A/T)TTTGC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for BPIFA4P Gene

Variant ID Type Subtype PubMed ID
nsv458964 CNV Loss 19166990
esv2751912 CNV Loss 17911159

Relevant External Links for BPIFA4P Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for BPIFA4P Gene

Disorders for BPIFA4P Gene

MalaCards: The human disease database

MalaCards: The human disease database.

Search for BPIFA4P Gene in MalaCards »

(1) Diseases for BPIFA4P Gene including...

genes like me logo Genes that share disorders with BPIFA4P: view

No data available for OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for BPIFA4P Gene

Publications for BPIFA4P Gene

  1. Discovery of the breast cancer gene BASE using a molecular approach to enrich for genes encoding membrane and secreted proteins. (PMID: 12538848) Egland K.A. … Pastan I. (Proc. Natl. Acad. Sci. U.S.A. 2003) 2 3 4
  2. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P. … Rogers J. (Nature 2001) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. (PMID: 21787333) Bingle C.D. … Craven C.J. (Biochem. Soc. Trans. 2011) 2 3
  5. Genome-wide association study of primary dentition pit-and-fissure and smooth surface caries. (PMID: 24556642) Zeng Z. … Shaffer J.R. (Caries Res. 2014) 3

Products for BPIFA4P Gene

Sources for BPIFA4P Gene

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