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Aliases for BPIFA4P Gene

Aliases for BPIFA4P Gene

  • BPI Fold Containing Family A Member 4, Pseudogene 2 3 5
  • PLUNC Family Pseudogene 2 3
  • BASE 3 4
  • Gene Expressed Only In The Salivary Gland And Breast Cancers 3
  • BPI Fold Containing Family A, Member 4, Pseudogene 4
  • Breast Cancer And Salivary Gland-Expressed Protein 4
  • Breast Cancer And Salivary Gland Expression Gene 2
  • Breast Cancer And Salivary Gland Expression 3
  • Putative Latherin 4
  • LATH 4

External Ids for BPIFA4P Gene

Previous GeneCards Identifiers for BPIFA4P Gene

  • GC20P031784

Summaries for BPIFA4P Gene

GeneCards Summary for BPIFA4P Gene

BPIFA4P (BPI Fold Containing Family A Member 4, Pseudogene) is a Pseudogene.

UniProtKB/Swiss-Prot for BPIFA4P Gene

  • Major protein in sweat, has surfactant properties.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BPIFA4P Gene

Genomics for BPIFA4P Gene

Regulatory Elements for BPIFA4P Gene

Enhancers for BPIFA4P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20F033206 0.6 FANTOM5 0.4 +12.9 12926 0.1 BPIFA1 BPIFB3 DNMT3B ENSG00000224876 BPIFA4P
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around BPIFA4P on UCSC Golden Path with GeneCards custom track

Genomic Location for BPIFA4P Gene

33,193,585 bp from pter
33,210,462 bp from pter
16,878 bases
Plus strand

Genomic View for BPIFA4P Gene

Genes around BPIFA4P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BPIFA4P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BPIFA4P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BPIFA4P Gene

Proteins for BPIFA4P Gene

  • Protein details for BPIFA4P Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative BPIFA4P protein
    Protein Accession:

    Protein attributes for BPIFA4P Gene

    179 amino acids
    Molecular mass:
    19456 Da
    Quaternary structure:
    No Data Available

neXtProt entry for BPIFA4P Gene

Post-translational modifications for BPIFA4P Gene

No Post-translational modifications

No data available for DME Specific Peptides for BPIFA4P Gene

Domains & Families for BPIFA4P Gene

Gene Families for BPIFA4P Gene

Protein Domains for BPIFA4P Gene

Suggested Antigen Peptide Sequences for BPIFA4P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the BPI/LBP/Plunc superfamily. Plunc family.
  • Belongs to the BPI/LBP/Plunc superfamily. Plunc family.
genes like me logo Genes that share domains with BPIFA4P: view

Function for BPIFA4P Gene

Molecular function for BPIFA4P Gene

UniProtKB/Swiss-Prot Function:
Major protein in sweat, has surfactant properties.
genes like me logo Genes that share phenotypes with BPIFA4P: view

Animal Model Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BPIFA4P Gene

Localization for BPIFA4P Gene

Subcellular locations from UniProtKB/Swiss-Prot for BPIFA4P Gene


No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BPIFA4P Gene

Pathways & Interactions for BPIFA4P Gene

SuperPathways for BPIFA4P Gene

No Data Available

Interacting Proteins for BPIFA4P Gene

Gene Ontology (GO) - Biological Process for BPIFA4P Gene


No data available for Pathways by source and SIGNOR curated interactions for BPIFA4P Gene

Transcripts for BPIFA4P Gene

mRNA/cDNA for BPIFA4P Gene

(1) REFSEQ mRNAs :
(8) Additional mRNA sequences :
(6) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BPIFA4P Gene

BPI fold containing family A, member 4, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BPIFA4P Gene

ExUns: 1a · 1b ^ 2a · 2b · 2c ^ 3a · 3b · 3c ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9
SP1: - -
SP2: -
SP3: - - -

Relevant External Links for BPIFA4P Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for BPIFA4P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BPIFA4P Gene

mRNA differential expression in normal tissues according to GTEx for BPIFA4P Gene

This gene is overexpressed in Testis (x19.7) and Prostate (x18.6).

NURSA nuclear receptor signaling pathways regulating expression of BPIFA4P Gene:


SOURCE GeneReport for Unigene cluster for BPIFA4P Gene:


mRNA Expression by UniProt/SwissProt for BPIFA4P Gene:

Tissue specificity: Expressed in breast cancer and salivary gland.
genes like me logo Genes that share expression patterns with BPIFA4P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression and Protein tissue co-expression partners for BPIFA4P Gene

Orthologs for BPIFA4P Gene

Evolution for BPIFA4P Gene

Gene Tree for BPIFA4P (if available)
Gene Tree for BPIFA4P (if available)

No data available for Orthologs for BPIFA4P Gene

Paralogs for BPIFA4P Gene

No data available for Paralogs for BPIFA4P Gene

Variants for BPIFA4P Gene

Sequence variations from dbSNP and Humsavar for BPIFA4P Gene

SNP ID Clin Chr 20 pos Sequence Context AA Info Type
rs1040795 -- 33,191,941(+) TAAGA(A/T)TTTGC upstream-variant-2KB
rs10556531 -- 33,197,068(+) ACTCT(-/GTCT)CAAAA intron-variant
rs111230046 -- 33,202,360(+) AAGCC(A/G)TTCCC intron-variant
rs111241395 -- 33,196,137(+) GTCTC(C/T)ACTAA intron-variant
rs111284934 -- 33,206,229(+) ATCTG(-/C)CCAAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for BPIFA4P Gene

Variant ID Type Subtype PubMed ID
esv2751912 CNV loss 17911159
nsv1056411 CNV loss 25217958
nsv1060241 CNV loss 25217958
nsv458964 CNV loss 19166990
nsv585926 CNV loss 21841781

Relevant External Links for BPIFA4P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for BPIFA4P Gene

Disorders for BPIFA4P Gene

Relevant External Links for BPIFA4P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for BPIFA4P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BPIFA4P Gene

Publications for BPIFA4P Gene

  1. Discovery of the breast cancer gene BASE using a molecular approach to enrich for genes encoding membrane and secreted proteins. (PMID: 12538848) Egland K.A. … Pastan I. (Proc. Natl. Acad. Sci. U.S.A. 2003) 2 3 4 64
  2. Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. (PMID: 21787333) Bingle C.D. … Craven C.J. (Biochem. Soc. Trans. 2011) 2 3 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  4. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P. … Rogers J. (Nature 2001) 3 4 64
  5. Genome-wide association study of primary dentition pit-and-fissure and smooth surface caries. (PMID: 24556642) Zeng Z. … Shaffer J.R. (Caries Res. 2014) 3 64

Products for BPIFA4P Gene

Sources for BPIFA4P Gene

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