Free for academic non-profit institutions. Other users need a Commercial license

Aliases for BORCS7-ASMT Gene

Subcategory (RNA class) for BORCS7-ASMT Gene


Quality Score for this RNA gene is


Aliases for BORCS7-ASMT Gene

  • BORCS7-ASMT Readthrough (NMD Candidate) 2 3 5
  • C10orf32-ASMT Readthrough (NMD Candidate) 2
  • C10orf32-AS3MT 3
  • C10orf32-ASMT 3

External Ids for BORCS7-ASMT Gene

Previous HGNC Symbols for BORCS7-ASMT Gene

  • C10orf32-ASMT

Summaries for BORCS7-ASMT Gene

Entrez Gene Summary for BORCS7-ASMT Gene

  • This locus represents naturally occurring read-through transcription between the neighboring C10orf32 (chromosome 10 open reading frame 32) and AS3MT (arsenic, +3 oxidation state, methyltransferase) genes. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is therefore unlikely to produce a protein product. [provided by RefSeq, Dec 2010]

GeneCards Summary for BORCS7-ASMT Gene

BORCS7-ASMT (BORCS7-ASMT Readthrough (NMD Candidate)) is an RNA Gene, and is affiliated with the ncRNA class. An important paralog of this gene is BORCS7.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BORCS7-ASMT Gene

Genomics for BORCS7-ASMT Gene

Regulatory Elements for BORCS7-ASMT Gene

Enhancers for BORCS7-ASMT Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around BORCS7-ASMT on UCSC Golden Path with GeneCards custom track

Promoters for BORCS7-ASMT Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around BORCS7-ASMT on UCSC Golden Path with GeneCards custom track

Genomic Location for BORCS7-ASMT Gene

102,854,210 bp from pter
102,901,899 bp from pter
47,690 bases
Plus strand

Genomic View for BORCS7-ASMT Gene

Genes around BORCS7-ASMT on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BORCS7-ASMT Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BORCS7-ASMT Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BORCS7-ASMT Gene

Proteins for BORCS7-ASMT Gene

  • Protein details for BORCS7-ASMT Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    Protein BORCS7-ASMT
    Protein Accession:

    Protein attributes for BORCS7-ASMT Gene

    106 amino acids
    Molecular mass:
    11695 Da
    Quaternary structure:
    No Data Available

neXtProt entry for BORCS7-ASMT Gene

Proteomics data for BORCS7-ASMT Gene at MOPED

Post-translational modifications for BORCS7-ASMT Gene

No Post-translational modifications

Other Protein References for BORCS7-ASMT Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for BORCS7-ASMT Gene

Domains & Families for BORCS7-ASMT Gene

Protein Domains for BORCS7-ASMT Gene


Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with BORCS7-ASMT: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BORCS7-ASMT Gene

Function for BORCS7-ASMT Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BORCS7-ASMT Gene

Localization for BORCS7-ASMT Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BORCS7-ASMT Gene

Pathways & Interactions for BORCS7-ASMT Gene

SuperPathways for BORCS7-ASMT Gene

No Data Available

Interacting Proteins for BORCS7-ASMT Gene

STRING Interaction Network Preview (showing 1 interactants - click image to see details)
Selected Interacting proteins: ENSP00000299353 for BORCS7-ASMT Gene via STRING

Symbol External ID(s) Details

Gene Ontology (GO) - Biological Process for BORCS7-ASMT Gene


No data available for Pathways by source and SIGNOR curated interactions for BORCS7-ASMT Gene

Drugs & Compounds for BORCS7-ASMT Gene

No Compound Related Data Available

Transcripts for BORCS7-ASMT Gene


(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BORCS7-ASMT Gene

No ASD Table

Relevant External Links for BORCS7-ASMT Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for BORCS7-ASMT Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for BORCS7-ASMT Gene

Orthologs for BORCS7-ASMT Gene

This gene was present in the common ancestor of chordates.

Orthologs for BORCS7-ASMT Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia -- 36
  • 96 (a)
(Canis familiaris)
Mammalia -- 36
  • 82 (a)
(Monodelphis domestica)
Mammalia -- 36
  • 90 (a)
(Mus musculus)
Mammalia 2010012O05Rik 36
  • 96 (a)
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 88 (a)
(Pan troglodytes)
Mammalia C10ORF32 36
  • 100 (a)
(Gallus gallus)
Aves C6H10ORF32 36
  • 83 (a)
(Anolis carolinensis)
Reptilia -- 36
  • 83 (a)
(Danio rerio)
Actinopterygii C13H10orf32 36
  • 79 (a)
Species with no ortholog for BORCS7-ASMT:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for BORCS7-ASMT Gene

Gene Tree for BORCS7-ASMT (if available)
Gene Tree for BORCS7-ASMT (if available)

Paralogs for BORCS7-ASMT Gene

Paralogs for BORCS7-ASMT Gene

genes like me logo Genes that share paralogs with BORCS7-ASMT: view

Variants for BORCS7-ASMT Gene

Sequence variations from dbSNP and Humsavar for BORCS7-ASMT Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs10786717 -- 102,865,480(+) CACAG(A/G)GTCAG intron-variant
rs563328645 -- 102,865,475(+) CGGAT(C/T)ACAGA intron-variant
rs545322072 -- 102,865,462(+) AGGCC(A/G)AGGCA intron-variant
rs548622334 -- 102,865,506(+) CTGGC(C/T)AACAT intron-variant
rs766010033 -- 102,865,492(+) AGTTC(A/G)AGACC intron-variant

Variation tolerance for BORCS7-ASMT Gene

Gene Damage Index Score: 0.07; 1.68% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Relevant External Links for BORCS7-ASMT Gene

Disorders for BORCS7-ASMT Gene

Relevant External Links for BORCS7-ASMT

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for BORCS7-ASMT Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BORCS7-ASMT Gene

Publications for BORCS7-ASMT Gene

  1. Genome-wide association study in Chinese identifies novel loci for blood pressure and hypertension. (PMID: 25249183) Lu X. … Gu D. (Hum. Mol. Genet. 2015) 3 67
  2. Gene-age interactions in blood pressure regulation: a large-scale investigation with the CHARGE, Global BPgen, and ICBP Consortia. (PMID: 24954895) Simino J. … Rao D.C. (Am. J. Hum. Genet. 2014) 3
  3. Biological insights from 108 schizophrenia-associated genetic loci. (PMID: 25056061) (Nature 2014) 3
  4. Identification of risk loci with shared effects on five major psychiatric disorders: a genome-wide analysis. (PMID: 23453885) (Lancet 2013) 3
  5. Genome-wide association analysis identifies 13 new risk loci for schizophrenia. (PMID: 23974872) Ripke S. … Sullivan P.F. (Nat. Genet. 2013) 3

Products for BORCS7-ASMT Gene

Sources for BORCS7-ASMT Gene