Free for academic non-profit institutions. Other users need a Commercial license

Aliases for BOLA3-AS1 Gene

Subcategory (RNA class) for BOLA3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is


Aliases for BOLA3-AS1 Gene

  • BOLA3 Antisense RNA 1 (Head To Head) 2 3 5
  • BOLA3 Antisense RNA 1 (Non-Protein Coding) 2
  • BOLA3 Antisense RNA 1 2

External Ids for BOLA3-AS1 Gene

Previous GeneCards Identifiers for BOLA3-AS1 Gene

  • GC02P074379

Summaries for BOLA3-AS1 Gene

GeneCards Summary for BOLA3-AS1 Gene

BOLA3-AS1 (BOLA3 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for BOLA3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BOLA3-AS1 Gene

Genomics for BOLA3-AS1 Gene

Regulatory Elements for BOLA3-AS1 Gene

Enhancers for BOLA3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H074181 1.5 FANTOM5 Ensembl ENCODE 24.4 +34.0 33981 2.1 HDGF SIN3A TCF12 ATF7 RUNX3 NCOA1 JUNB SMARCA4 NBN HMBOX1 BOLA3-AS1 BOLA3 LOC107985899 MOB1A TET3 NAT8B ENSG00000279201
GH02H074184 1.6 FANTOM5 Ensembl ENCODE 21.7 +38.4 38439 4.8 HDGF PKNOX1 ATF1 TCF12 GATA2 ZNF207 ATF7 RUNX3 NCOA1 JUNB BOLA3-AS1 LOC107985899 BOLA3 FNBP1P1 MOB1A MTHFD2 TET3 LBX2 ENSG00000279201
GH02H074204 1.2 Ensembl ENCODE 25.3 +57.8 57791 2.9 PKNOX1 ATF1 FEZF1 ATF7 RUNX3 NCOA1 JUNB ZNF592 SSRP1 SMARCA4 BOLA3-AS1 MOB1A BOLA3 RTKN LOC107985899 MTHFD2 GC02P074217
GH02H074177 1.1 ENCODE 26.7 +30.5 30536 2.3 HDGF PKNOX1 ARID4B SIN3A DMAP1 YY1 ZNF766 ZNF207 SP3 SP5 DUSP11 BOLA3-AS1 ENSG00000273245 AUP1 TTC31 DGUOK-AS1 LOC107985899 INO80B MOGS PCGF1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BOLA3-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for BOLA3-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000119130 -81 1401 HDGF MLX ARNT ARID4B SIN3A DMAP1 YY1 CBX5 ZNF143 SP5

Genomic Locations for BOLA3-AS1 Gene

Genomic Locations for BOLA3-AS1 Gene
4,409 bases
Plus strand

Genomic View for BOLA3-AS1 Gene

Genes around BOLA3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BOLA3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BOLA3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BOLA3-AS1 Gene

Proteins for BOLA3-AS1 Gene

Post-translational modifications for BOLA3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BOLA3-AS1 Gene

Domains & Families for BOLA3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BOLA3-AS1 Gene

Function for BOLA3-AS1 Gene

Phenotypes for BOLA3-AS1 Gene

genes like me logo Genes that share phenotypes with BOLA3-AS1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BOLA3-AS1 Gene

Localization for BOLA3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BOLA3-AS1 Gene

Pathways & Interactions for BOLA3-AS1 Gene

SuperPathways for BOLA3-AS1 Gene

No Data Available

Interacting Proteins for BOLA3-AS1 Gene

Gene Ontology (GO) - Biological Process for BOLA3-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for BOLA3-AS1 Gene

Drugs & Compounds for BOLA3-AS1 Gene

No Compound Related Data Available

Transcripts for BOLA3-AS1 Gene

mRNA/cDNA for BOLA3-AS1 Gene

(8) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BOLA3-AS1 Gene

BOLA3 antisense RNA 1 (head to head):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for BOLA3-AS1 Gene

No ASD Table

Relevant External Links for BOLA3-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for BOLA3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BOLA3-AS1 Gene

SOURCE GeneReport for Unigene cluster for BOLA3-AS1 Gene:

genes like me logo Genes that share expression patterns with BOLA3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BOLA3-AS1 Gene

Orthologs for BOLA3-AS1 Gene

Evolution for BOLA3-AS1 Gene

Gene Tree for BOLA3-AS1 (if available)
Gene Tree for BOLA3-AS1 (if available)

No data available for Orthologs for BOLA3-AS1 Gene

Paralogs for BOLA3-AS1 Gene

No data available for Paralogs for BOLA3-AS1 Gene

Variants for BOLA3-AS1 Gene

Sequence variations from dbSNP and Humsavar for BOLA3-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs761339384 Uncertain significance 74,147,909(+) TCACT(A/G)TATGC upstream-variant-2KB, utr-variant-5-prime
rs886056327 Uncertain significance 74,147,882(-) ACGTC(A/G)GCCGG upstream-variant-2KB, utr-variant-5-prime
rs531409597 Benign 74,147,830(+) CGGAT(A/C/G)CCGCG upstream-variant-2KB, reference, synonymous-codon
rs1000094086 -- 74,148,899(+) CACGC(A/G)GTCTG nc-transcript-variant, upstream-variant-2KB
rs1000334840 -- 74,149,847(+) CTTTT(A/C)TTTAT nc-transcript-variant, upstream-variant-2KB

Relevant External Links for BOLA3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BOLA3-AS1 Gene

Disorders for BOLA3-AS1 Gene

Relevant External Links for BOLA3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for BOLA3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BOLA3-AS1 Gene

Publications for BOLA3-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for BOLA3-AS1 Gene

Sources for BOLA3-AS1 Gene

Loading form....