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Aliases for BOLA3-AS1 Gene

Subcategory (RNA class) for BOLA3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for BOLA3-AS1 Gene

  • BOLA3 Antisense RNA 1 (Head To Head) 2 3 5
  • BOLA3 Antisense RNA 1 (Non-Protein Coding) 2
  • BOLA3 Antisense RNA 1 2

External Ids for BOLA3-AS1 Gene

Previous GeneCards Identifiers for BOLA3-AS1 Gene

  • GC02P074379

Summaries for BOLA3-AS1 Gene

GeneCards Summary for BOLA3-AS1 Gene

BOLA3-AS1 (BOLA3 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BOLA3-AS1 Gene

Genomics for BOLA3-AS1 Gene

Regulatory Elements for BOLA3-AS1 Gene

Enhancers for BOLA3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G074181 1.5 FANTOM5 Ensembl ENCODE 24.4 +34.0 33981 2.1 HDGF WRNIP1 TCF12 KDM4B NCOA1 JUNB TBX21 SMARCA4 NBN HMBOX1 BOLA3-AS1 BOLA3 LOC107985899 MOB1A TET3 NAT8B ENSG00000279201
GH02G074184 1.6 FANTOM5 Ensembl ENCODE 21.7 +38.4 38439 4.8 HDGF PKNOX1 FOXA2 CREB3L1 ZNF207 ZNF263 SP5 JUNB TBX21 ZNF592 BOLA3-AS1 LOC107985899 BOLA3 FNBP1P1 MOB1A MTHFD2 TET3 LBX2 ENSG00000279201
GH02G074204 1.2 Ensembl ENCODE 25.3 +57.8 57791 2.9 PKNOX1 ATF1 CREB3L1 WRNIP1 FEZF1 ZNF121 FOS NCOA1 JUNB TBX21 BOLA3-AS1 MOB1A BOLA3 RTKN LOC107985899 MTHFD2 GC02P074217
GH02G074177 1.1 ENCODE 26.7 +30.5 30536 2.3 HDGF HNRNPUL1 PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF766 ZNF207 DUSP11 BOLA3-AS1 ENSG00000273245 DGUOK-AS1 LOC107985899 MOGS PCGF1 HTRA2 BOLA3 MTHFD2
GH02G074196 1.2 ENCODE 20.6 +50.8 50767 3.9 CREB3L1 AGO1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC DUSP11 DGUOK-AS1 ENSG00000273245 BOLA3-AS1 WBP1 SLC4A5 MOGS PCGF1 SEMA4F HTRA2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BOLA3-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for BOLA3-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000119130 -81 1401 HDGF MLX ARNT AGO1 ARID4B SIN3A DMAP1 YY1 CBX5 ZNF143

Genomic Location for BOLA3-AS1 Gene

Chromosome:
2
Start:
74,147,981 bp from pter
End:
74,152,389 bp from pter
Size:
4,409 bases
Orientation:
Plus strand

Genomic View for BOLA3-AS1 Gene

Genes around BOLA3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BOLA3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BOLA3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BOLA3-AS1 Gene

Proteins for BOLA3-AS1 Gene

Post-translational modifications for BOLA3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BOLA3-AS1 Gene

Domains & Families for BOLA3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BOLA3-AS1 Gene

Function for BOLA3-AS1 Gene

Phenotypes for BOLA3-AS1 Gene

genes like me logo Genes that share phenotypes with BOLA3-AS1: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BOLA3-AS1 Gene

Localization for BOLA3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BOLA3-AS1 Gene

Pathways & Interactions for BOLA3-AS1 Gene

SuperPathways for BOLA3-AS1 Gene

No Data Available

Interacting Proteins for BOLA3-AS1 Gene

Gene Ontology (GO) - Biological Process for BOLA3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BOLA3-AS1 Gene

Drugs & Compounds for BOLA3-AS1 Gene

No Compound Related Data Available

Transcripts for BOLA3-AS1 Gene

mRNA/cDNA for BOLA3-AS1 Gene

(8) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for BOLA3-AS1 Gene

BOLA3 antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BOLA3-AS1 Gene

No ASD Table

Relevant External Links for BOLA3-AS1 Gene

GeneLoc Exon Structure for
BOLA3-AS1
ECgene alternative splicing isoforms for
BOLA3-AS1

Expression for BOLA3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for BOLA3-AS1 Gene

SOURCE GeneReport for Unigene cluster for BOLA3-AS1 Gene:

Hs.503348
genes like me logo Genes that share expression patterns with BOLA3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BOLA3-AS1 Gene

Orthologs for BOLA3-AS1 Gene

Evolution for BOLA3-AS1 Gene

ENSEMBL:
Gene Tree for BOLA3-AS1 (if available)
TreeFam:
Gene Tree for BOLA3-AS1 (if available)

No data available for Orthologs for BOLA3-AS1 Gene

Paralogs for BOLA3-AS1 Gene

No data available for Paralogs for BOLA3-AS1 Gene

Variants for BOLA3-AS1 Gene

Sequence variations from dbSNP and Humsavar for BOLA3-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs761339384 Uncertain significance 74,147,909(+) TCACT(A/G)TATGC upstream-variant-2KB, utr-variant-5-prime
rs886056327 Uncertain significance 74,147,882(-) ACGTC(A/G)GCCGG upstream-variant-2KB, utr-variant-5-prime
rs531409597 Benign 74,147,830(+) CGGAT(A/C/G)CCGCG upstream-variant-2KB, reference, synonymous-codon
rs1000094086 -- 74,148,899(+) CACGC(A/G)GTCTG nc-transcript-variant, upstream-variant-2KB
rs1000334840 -- 74,149,847(+) CTTTT(A/C)TTTAT nc-transcript-variant, upstream-variant-2KB

Relevant External Links for BOLA3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BOLA3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BOLA3-AS1 Gene

Disorders for BOLA3-AS1 Gene

Relevant External Links for BOLA3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BOLA3-AS1

No disorders were found for BOLA3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BOLA3-AS1 Gene

Publications for BOLA3-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for BOLA3-AS1 Gene

Sources for BOLA3-AS1 Gene

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