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Aliases for BOD1L1 Gene

Aliases for BOD1L1 Gene

  • Biorientation Of Chromosomes In Cell Division 1-Like 1 2 3
  • Family With Sequence Similarity 44, Member A 2 3
  • FAM44A 3 4
  • BOD1L 3 4
  • Biorientation Of Chromosomes In Cell Division Protein 1-Like 1 3
  • Biorientation Of Chromosomes In Cell Division 1-Like 2
  • Protein FAM44A 4
  • KIAA1327 4

External Ids for BOD1L1 Gene

Previous Symbols for BOD1L1 Gene

  • FAM44A
  • BOD1L

Summaries for BOD1L1 Gene

GeneCards Summary for BOD1L1 Gene

BOD1L1 (Biorientation Of Chromosomes In Cell Division 1-Like 1) is a Protein Coding gene. An important paralog of this gene is BOD1.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BOD1L1 Gene

Genomics for BOD1L1 Gene

Genomic Location for BOD1L1 Gene

Start:
13,568,738 bp from pter
End:
13,627,723 bp from pter
Size:
58,986 bases
Orientation:
Minus strand

Genomic View for BOD1L1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BOD1L1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BOD1L1 Gene

No data available for Regulatory Elements for BOD1L1 Gene

Proteins for BOD1L1 Gene

  • Protein details for BOD1L1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8NFC6-BD1L1_HUMAN
    Recommended name:
    Biorientation of chromosomes in cell division protein 1-like 1
    Protein Accession:
    Q8NFC6
    Secondary Accessions:
    • Q6P0M8
    • Q96AL1
    • Q9H6G0
    • Q9NTD6
    • Q9P2L9

    Protein attributes for BOD1L1 Gene

    Size:
    3051 amino acids
    Molecular mass:
    330466 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH16987.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAB15299.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305}; Sequence=CAB70705.1; Type=Miscellaneous discrepancy; Note=Contaminating sequence. Potential poly-A sequence.; Evidence={ECO:0000305};

neXtProt entry for BOD1L1 Gene

Proteomics data for BOD1L1 Gene at MOPED

Post-translational modifications for BOD1L1 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys81, Lys2981, and Lys2982

Other Protein References for BOD1L1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for BOD1L1 Gene

Domains for BOD1L1 Gene

Protein Domains for BOD1L1 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

Q8NFC6

UniProtKB/Swiss-Prot:

BD1L1_HUMAN
Domain:
  • Contains 1 A.T hook DNA-binding domain.:
    • Q8NFC6
Family:
  • Belongs to the BOD1 family.:
    • Q8NFC6
genes like me logo Genes that share domains with BOD1L1: view

No data available for Gene Families and Suggested Antigen Peptide Sequences for BOD1L1 Gene

Function for BOD1L1 Gene

Gene Ontology (GO) - Molecular Function for BOD1L1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003677 DNA binding IEA --
genes like me logo Genes that share ontologies with BOD1L1: view

Phenotypes for BOD1L1 Gene

GenomeRNAi human phenotypes for BOD1L1:
genes like me logo Genes that share phenotypes with BOD1L1: view

miRNA for BOD1L1 Gene

miRTarBase miRNAs that target BOD1L1

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for BOD1L1 Gene

Localization for BOD1L1 Gene

Gene Ontology (GO) - Cellular Components for BOD1L1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus --
GO:0005654 nucleoplasm IDA --
genes like me logo Genes that share ontologies with BOD1L1: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for BOD1L1 Gene

Pathways for BOD1L1 Gene

SuperPathways for BOD1L1 Gene

No Data Available

Interacting Proteins for BOD1L1 Gene

STRING Interaction Network Preview (showing 3 interactants - click image to see details)
http://string-db.org/version_10/api/image/networkList?limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000040738%0d%0a9606.ENSP00000344818%0d%0a9606.ENSP00000323588%0d%0a9606.ENSP00000360916%0d%0a
Selected Interacting proteins: ENSP00000040738 Q8NFC6-BD1L1_HUMAN for BOD1L1 Gene via STRING I2D

Gene Ontology (GO) - Biological Process for BOD1L1 Gene

None

No data available for Pathways by source for BOD1L1 Gene

Transcripts for BOD1L1 Gene

Unigene Clusters for BOD1L1 Gene

Biorientation of chromosomes in cell division 1-like 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for BOD1L1 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11a · 11b ^ 12 ^ 13 ^ 14a · 14b ^ 15 ^ 16 ^ 17 ^ 18a · 18b · 18c · 18d
SP1: - - -
SP2: - -
SP3:
SP4: -
SP5: -

Relevant External Links for BOD1L1 Gene

GeneLoc Exon Structure for
BOD1L1
ECgene alternative splicing isoforms for
BOD1L1

Expression for BOD1L1 Gene

mRNA expression in normal human tissues for BOD1L1 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for BOD1L1 Gene

SOURCE GeneReport for Unigene cluster for BOD1L1 Gene Hs.744935

genes like me logo Genes that share expressions with BOD1L1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for BOD1L1 Gene

Orthologs for BOD1L1 Gene

This gene was present in the common ancestor of animals.

Orthologs for BOD1L1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia BOD1L1 35
  • 99.52 (n)
  • 99.18 (a)
BOD1L1 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia BOD1L 35
  • 78.85 (n)
  • 72.4 (a)
BOD1L 36
  • 72 (a)
OneToOne
dog
(Canis familiaris)
Mammalia BOD1L1 35
  • 82.18 (n)
  • 75.86 (a)
BOD1L1 36
  • 75 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Bod1l 35
  • 78.46 (n)
  • 70.23 (a)
Bod1l 16
Bod1l 36
  • 67 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 49 (a)
ManyToMany
platypus
(Ornithorhynchus anatinus)
Mammalia BOD1L1 36
  • 67 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Bod1l1 35
  • 78.48 (n)
  • 70.51 (a)
chicken
(Gallus gallus)
Aves BOD1L 35
  • 62.51 (n)
  • 51.54 (a)
BOD1L1 36
  • 40 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia BOD1L1 36
  • 34 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.21296 35
zebrafish
(Danio rerio)
Actinopterygii BOD1L1 36
  • 25 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG5514 36
  • 16 (a)
OneToMany
Species with no ortholog for BOD1L1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for BOD1L1 Gene

ENSEMBL:
Gene Tree for BOD1L1 (if available)
TreeFam:
Gene Tree for BOD1L1 (if available)

Paralogs for BOD1L1 Gene

Paralogs for BOD1L1 Gene

Selected SIMAP similar genes for BOD1L1 Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with BOD1L1: view

Variants for BOD1L1 Gene

Sequence variations from dbSNP and Humsavar for BOD1L1 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs758975 -- 13,591,712(-) ACTGA(C/T)AAAGA intron-variant
rs971341 -- 13,610,015(-) AAAAC(A/G)TTACT intron-variant
rs973953 -- 13,608,050(+) CTTAA(A/G)AAGTT intron-variant
rs1013300 -- 13,593,935(-) CTAAA(C/T)GAATT intron-variant
rs1053032 -- 13,569,423(-) AAACT(A/C)GCATG utr-variant-3-prime

Relevant External Links for BOD1L1 Gene

HapMap Linkage Disequilibrium report
BOD1L1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for BOD1L1 Gene

Disorders for BOD1L1 Gene

No disorders were found for BOD1L1 Gene.

No data available for UniProtKB/Swiss-Prot for BOD1L1 Gene

Publications for BOD1L1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  3. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PMID: 17081983) Olsen J.V. … Mann M. (Cell 2006) 3 4
  4. Tryptic digestion of ubiquitin standards reveals an improved strategy for identifying ubiquitinated proteins by mass spectrometry. (PMID: 17370265) Denis N.J. … Figeys D. (Proteomics 2007) 3 4
  5. Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10718198) Nagase T. … Ohara O. (DNA Res. 2000) 3 4

Products for BOD1L1 Gene

Sources for BOD1L1 Gene

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