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Aliases for BMS1P21 Gene

Aliases for BMS1P21 Gene

  • BMS1, Ribosome Biogenesis Factor Pseudogene 21 2 3 5
  • BMS1 Pseudogene 21 2

External Ids for BMS1P21 Gene

Previous GeneCards Identifiers for BMS1P21 Gene

  • GC10P080042
  • GC10P080069
  • GC10P080093
  • GC10P080116
  • GC10P080140
  • GC10P080163

Summaries for BMS1P21 Gene

GeneCards Summary for BMS1P21 Gene

BMS1P21 (BMS1, Ribosome Biogenesis Factor Pseudogene 21) is a Pseudogene.

Additional gene information for BMS1P21 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BMS1P21 Gene

Genomics for BMS1P21 Gene

Regulatory Elements for BMS1P21 Gene

Enhancers for BMS1P21 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H079904 0.9 ENCODE 0.7 +0.1 92 1 ZNF76 ZBTB40 ZNF2 YY1 GLIS2 SCRT2 ZNF143 KLF7 ZNF362 ZBTB11 SFTPD MBL1P CTSLP6 SFTPD-AS1 NUTM2B ENSG00000283913 BMS1P21
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around BMS1P21 on UCSC Golden Path with GeneCards custom track

Promoters for BMS1P21 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000030713 203 1799 ZNF76 ZBTB40 ZNF2 YY1 GLIS2 SCRT2 ZNF143 KLF7 ZNF362 ZBTB11

Genomic Location for BMS1P21 Gene

Chromosome:
10
Start:
79,904,898 bp from pter
End:
79,931,801 bp from pter
Size:
26,904 bases
Orientation:
Plus strand

Genomic View for BMS1P21 Gene

Genes around BMS1P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BMS1P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BMS1P21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BMS1P21 Gene

Proteins for BMS1P21 Gene

Post-translational modifications for BMS1P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BMS1P21 Gene

Domains & Families for BMS1P21 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BMS1P21 Gene

Function for BMS1P21 Gene

Phenotypes for BMS1P21 Gene

GenomeRNAi human phenotypes for BMS1P21:
genes like me logo Genes that share phenotypes with BMS1P21: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BMS1P21 Gene

Localization for BMS1P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for BMS1P21 Gene

Pathways & Interactions for BMS1P21 Gene

SuperPathways for BMS1P21 Gene

No Data Available

Interacting Proteins for BMS1P21 Gene

Gene Ontology (GO) - Biological Process for BMS1P21 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BMS1P21 Gene

Drugs & Compounds for BMS1P21 Gene

No Compound Related Data Available

Transcripts for BMS1P21 Gene

mRNA/cDNA for BMS1P21 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BMS1P21 Gene

No ASD Table

Relevant External Links for BMS1P21 Gene

GeneLoc Exon Structure for
BMS1P21
ECgene alternative splicing isoforms for
BMS1P21

Expression for BMS1P21 Gene

NURSA nuclear receptor signaling pathways regulating expression of BMS1P21 Gene:

BMS1P21
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BMS1P21 Gene

Orthologs for BMS1P21 Gene

Evolution for BMS1P21 Gene

ENSEMBL:
Gene Tree for BMS1P21 (if available)
TreeFam:
Gene Tree for BMS1P21 (if available)

No data available for Orthologs for BMS1P21 Gene

Paralogs for BMS1P21 Gene

No data available for Paralogs for BMS1P21 Gene

Variants for BMS1P21 Gene

Sequence variations from dbSNP and Humsavar for BMS1P21 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000020293 -- 79,925,372(+) GCTTT(C/G)TTCTC intron-variant
rs1000246390 -- 79,930,797(+) CATGA(A/G)AATCT intron-variant
rs1000292311 -- 79,922,010(+) CCCAT(A/G)ATGTG intron-variant
rs1000341697 -- 79,910,322(+) AAAAC(-/T)TTAGA intron-variant
rs1000348792 -- 79,916,036(+) AATAA(A/T)GTTTC intron-variant

Relevant External Links for BMS1P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BMS1P21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BMS1P21 Gene

Disorders for BMS1P21 Gene

Relevant External Links for BMS1P21

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BMS1P21

No disorders were found for BMS1P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BMS1P21 Gene

Publications for BMS1P21 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 60
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60
  3. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 60

Products for BMS1P21 Gene

Sources for BMS1P21 Gene

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