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Aliases for BMS1P20 Gene

Aliases for BMS1P20 Gene

  • BMS1 Ribosome Biogenesis Factor Pseudogene 20 2 3
  • BMS1 Pseudogene 20 2

External Ids for BMS1P20 Gene

Summaries for BMS1P20 Gene

Entrez Gene Summary for BMS1P20 Gene

  • This locus appears to be a transcribed pseudogene of the BMS1 homolog of yeast ribosome assembly protein on chromosome 10 that has arisen from duplication of the 3' half of the parent gene. Frameshifts and premature stop codons are present in this pseudogene compared to the parent gene. This gene lies in the immunoglobulin lambda gene cluster on chromosome 22q11.21.[provided by RefSeq, Mar 2009]

GeneCards Summary for BMS1P20 Gene

BMS1P20 (BMS1 Ribosome Biogenesis Factor Pseudogene 20) is a Pseudogene.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BMS1P20 Gene

Genomics for BMS1P20 Gene

Genomic Location for BMS1P20 Gene

Start:
22,298,098 bp from pter
End:
22,322,968 bp from pter
Size:
24,871 bases
Orientation:
Plus strand

Genomic View for BMS1P20 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for BMS1P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BMS1P20 Gene

No data available for Regulatory Elements for BMS1P20 Gene

Proteins for BMS1P20 Gene

Post-translational modifications for BMS1P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BMS1P20 Gene

Domains for BMS1P20 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for BMS1P20 Gene

Function for BMS1P20 Gene

Phenotypes for BMS1P20 Gene

GenomeRNAi human phenotypes for BMS1P20:
genes like me logo Genes that share phenotypes with BMS1P20: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for BMS1P20 Gene

Localization for BMS1P20 Gene

No data available for Gene Ontology (GO) - Cellular Components for BMS1P20 Gene

Pathways for BMS1P20 Gene

SuperPathways for BMS1P20 Gene

No Data Available

Interacting Proteins for BMS1P20 Gene

Gene Ontology (GO) - Biological Process for BMS1P20 Gene

None

No data available for Pathways by source for BMS1P20 Gene

Transcripts for BMS1P20 Gene

mRNA/cDNA for BMS1P20 Gene

(1) REFSEQ mRNAs :
(19) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BMS1P20 Gene

No ASD Table

Relevant External Links for BMS1P20 Gene

GeneLoc Exon Structure for
BMS1P20
ECgene alternative splicing isoforms for
BMS1P20

Expression for BMS1P20 Gene

mRNA expression in normal human tissues for BMS1P20 Gene

Integrated Proteomics: protein expression from for BMS1P20 Gene

genes like me logo Genes that share expressions with BMS1P20: view

Orthologs for BMS1P20 Gene

Evolution for BMS1P20 Gene

ENSEMBL:
Gene Tree for BMS1P20 (if available)
TreeFam:
Gene Tree for BMS1P20 (if available)

No data available for Orthologs for BMS1P20 Gene

Paralogs for BMS1P20 Gene

No data available for Paralogs for BMS1P20 Gene

Variants for BMS1P20 Gene

Sequence variations from dbSNP and Humsavar for BMS1P20 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type MAF
rs702372 -- 22,307,206(+) GCTCT(A/G)TTATA nc-transcript-variant
rs737765 -- 22,319,284(+) CCTGG(C/T)CTAGT intron-variant
rs738895 -- 22,315,393(+) CTGGC(A/G)AACAA intron-variant
rs1044437 -- 22,306,953(+) AGAAC(A/C/T)TTGAC intron-variant, nc-transcript-variant
rs1044439 -- 22,306,963(+) CCCCC(A/G/T)TTACC intron-variant, nc-transcript-variant

Relevant External Links for BMS1P20 Gene

HapMap Linkage Disequilibrium report
BMS1P20

No data available for Structural Variations from Database of Genomic Variants (DGV) for BMS1P20 Gene

Disorders for BMS1P20 Gene

No disorders were found for BMS1P20 Gene.

No data available for UniProtKB/Swiss-Prot for BMS1P20 Gene

Publications for BMS1P20 Gene

  1. One-megabase sequence analysis of the human immunoglobulin lambda gene locus. (PMID: 9074928) Kawasaki K. … Shimizu N. (Genome Res. 1997) 3
  2. Human paralogs of KIAA0187 were created through independent pericentromeric-directed and chromosome-specific duplication mechanisms. (PMID: 11779832) Crosier M. … Jackson M.S. (Genome Res. 2002) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  5. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for BMS1P20 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate BMS1P20
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for BMS1P20
    • Block miRNA regulation of BMS1P20 using miScript Target Protectors

    Sources for BMS1P20 Gene

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