 |
 | Services
| |
 |
Aliases & Descriptions for BMP7
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| BMP-7 3 | | OP-1 1, 2, 3 | | OP1 3 | | OTTHUMP00000031357 2 |
| | | Descriptions |
|---|
| Eptotermin alfa 3 | | Osteogenic protein 1 2, 3 | | bone morphogenetic protein 7 2 |
|
| | Search outside databases for aliases for BMP7 genePrevious GC identifers: GC20M055473 GC20M056382 GC20M056430 |
Summaries for BMP7(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for BMP7: The bone morphogenetic proteins (BMPs) are a family of secreted signaling molecules that can induce ectopic bone growth. Many BMPs are part of the transforming growth factor-beta (TGFB) superfamily. BMPs were originally identified by an ability of demineralized bone extract to induce endochondral osteogenesis in vivo in an extraskeletal site. Based on its expression early in embryogenesis, the BMP encoded by this gene has a proposed role in early development and possible bone inductive activity. [provided by RefSeq] UniProtKB/Swiss-Prot: BMP7_HUMAN, P18075Function: Induces cartilage and bone formation. May be the osteoinductive factor responsible for the phenomenon of epithelial osteogenesis. Plays a role in calcium regulation and bone homeostasis |
Genomic Location for BMP7
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the BMP7 gene 
Entrez Gene cytogenetic band: 20q13 Ensembl cytogenetic band: 20q13.31 HGNC cytogenetic band: 20q13BMP7 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 20 GeneLoc Exon Structure GeneLoc location for GC20M055178:
(about GC identifiers)
Start:
|
55,178,962 bp from pter |
End:
|
55,275,092 bp from pter |
Size:
|
96,131 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000020.9 NT_011362.9
| Proteins for BMP7
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: BMP7_HUMAN, P18075 (See
protein sequence)Recommended Name: Bone morphogenetic protein 7 precursor Size: 431 amino acids; 49313 Da
Subunit: Homodimer; disulfide-linked. Interacts with SOSTDC1. Interacts with TWSG1 (By similarity)
Subcellular location: Secreted
PDB structures from and Proteopedia :1BMP (3D)
 1LX5 (3D)
 1LXI (3D)
 1M4U (3D)
 
Secondary accessions: Q9H512 Q9NTQ7Post-translational modifications:
Several N-termini starting at positions 293, 300, 315 and 316 have been identified by direct sequencing resulting in secretion of different mature forms (PubMed:17977014)1
REFSEQ proteins: NP_001710.1
ENSEMBL proteins: ENSP00000379205 ENSP00000379204 ENSP00000360340
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005576 | extracellular region |
IEA | -- | | GO:0005615 | extracellular space |
IEA | -- | About this table
Antibodies for BMP7: Assays for BMP7: | Protein
Domains/ Families for BMP7(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P18075
ProtoNet protein and cluster: P18075 3 Blocks protein families: IPB001111 Transforming growth factor beta (TGFb) IPB001839 Transforming growth factor beta (TGFb) IPB002400 Growth factor cystine knot superfamily signature
UniProtKB/Swiss-Prot: BMP7_HUMAN, P18075Similarity: Belongs to the TGF-beta family | Gene Function for BMP7
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001719
Applied Biosystems Silencer® siRNAs for BMP7
Sigma-Aldrich siRNA and siRNA Panels for BMP7  Sigma-Aldrich shRNA for BMP7  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001719                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001719                                  untagged cDNA clone in CMV expression vector: NM_001719 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001719
UniProtKB/Swiss-Prot: BMP7_HUMAN, P18075Function: Induces cartilage and bone formation. May be the osteoinductive factor responsible for the phenomenon of epithelial osteogenesis. Plays a role in calcium regulation and bone homeostasisGenatlas biochemistry entry for BMP7:bone morphogenetic protein 7 (Drosophila decapentaplegic-Vg-related,DVR family;TGFB superfamily)15/16 MGI mutant phenotypes (inferred from 7 alleles ) (MGI details for Bmp7) (see all 16
):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for BMP7
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 5/9 Sigma-Aldrich "Your Favorite Gene" Pathways for BMP7 (Your Favorite Gene powered by Ingenuity) (see all 9
) 
Gene Network CentralTM Interacting Genes and Proteins Network for BMP7 
5/95 Interacting proteins for BMP7 (P180751, 2 ENSP000003603403) via UniProtKB, MINT, and/or STRING (see all 95
)About this table
5/27 Gene Ontology (GO) biological process terms (links to tree view) (see all 27
): About this table
|
Drugs & Compounds for BMP7(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for BMP7 UniProtKB/Swiss-Prot: BMP7_HUMAN, P18075Pharmaceutical: Available under the names Osigraft (Stryker). Its use is indicated in the treatment of tibial non-union of at least 9 month duration, secondary to trauma, in skeletally mature patients, in cases where autograft has failed or is unfeasible 10/21 Novoseek chemical compound relationships for BMP7 gene (see all 21
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| safran |
67.63 |
3 |
8276880 (1), 8227084 (1) |
| hydroxyapatite |
45.30 |
38 |
19063689 (4), 16963359 (3), 18366207 (2), 15003788 (2) (see all 12) |
| tgf beta1 |
34.28 |
20 |
18040638 (7), 9326446 (3), 19112509 (2), 18434375 (1) |
| titanium |
27.21 |
1 |
15337402 (1) |
| threonine |
25.98 |
2 |
7791754 (1), 15450082 (1) |
| calcium hydroxide |
20.61 |
2 |
7575242 (1) |
| deoxyribonucleic acid |
15.04 |
4 |
18575444 (1), 10340856 (1), 12205411 (1) |
| gold |
5.82 |
2 |
14588284 (1), 10983596 (1) |
| tyrosine |
5.51 |
2 |
7496035 (1), 8598449 (1) |
| lipid |
1.25 |
2 |
17497692 (1), 8549671 (1) |
About this table
|
Transcripts for BMP7(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001719
Sigma-Aldrich siRNA and siRNA Panels for BMP7  Sigma-Aldrich shRNA for BMP7  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001719 REFSEQ mRNAs for BMP7 gene: NM_001719.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001719               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001719                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001719                                  untagged cDNA clone in CMV expression vector: NM_001719  Additional cDNA sequence: AK094784.1 AK291186.1 AK312419.1 BC008584.1 CR610754.1 EU679366.1 M60316.1 X51801.1 7 DOTS entries: DT.112582 DT.95155223 DT.100736594 DT.95239042 DT.97823505 DT.95073333 DT.40113485 24/143 AceView cDNA sequences (see all 143
):AL538341 BM927517 BC004248 BU730428 BG057007 CA396200 BE740547 BX332927 CR610754 BU151160 BU956160 BM694193 BQ880022 AW009846 BG187538 BU535475 BC008584 M60316 BM683430 BM694309 BU149950 BM704733 BU557947 AI359736
highest scoring ESTs for BMP7:X51801 AI094860 AL528073 BC004248 BC008584 BE616633 BF338314 BG914310 BM458426 BM694309 Unigene Cluster for BMP7: Bone morphogenetic protein 7 Hs.473163 [show with all ESTs]Unigene Representative Sequence: NM_001719
GeneLoc Exon Structure
5/8 Alternative Splicing Database (ASD) splice patterns (SP) for BMP7 (see all 8
)
| ExUns: | 1a | · | 1b | · | 1c | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9a | · | 9b | · | 9c | ^ | 10 | ^ | 11a | · | 11b | · | 11c | · | 11d | ^ | 12a | · | 12b | |
| SP1: | |   | |   | |   | - |   | - |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | - |   | |   | |   | - |   | |   | |   | |
| SP2: | |   | |   | |   | - |   | - |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | - |   | - |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | - |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for BMP7
3 Ensembl transcripts including schematic representations: ENST00000395864
ENST00000395863
ENST00000371291
|
Expression for BMP7
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| BMP7 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for BMP7
1 / 2 / 3 12 probe-sets matching BMP7 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: CACGGACTCG
SOURCE GeneReport for Unigene cluster: Hs.473163
Expression variation in blood from EXPOLDB for BMP7 UniProtKB/Swiss-Prot: BMP7_HUMAN, P18075Tissue specificity: Expressed in the kidneys and bladder. Lower levels seen in the brain |
Orthologs for BMP7
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for BMP7 gene from 5/12 species (see all 12
)
About this table Species with no ortholog for BMP7
ENSEMBL Gene Tree for BMP7 | Paralogs for BMP7(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for BMP7 gene
- BMP52 BMP62
|
SNPs/Variants for BMP7(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for BMP7 (up to first 250kb)
|
Disorders & Mutations for BMP7
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 112267
10/68 Novoseek disease relationships for BMP7 gene (see all 68
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| renal fibrosis |
72.18 |
11 |
18266088 (3), 15794307 (1), 17376778 (1), 19112509 (1) (see all 7) |
| degenerative spondylolisthesis |
68.47 |
10 |
16371892 (2), 15672240 (1), 19092614 (1), 15534410 (1) (see all 7) |
| furcation defects |
62.79 |
3 |
9526911 (2) |
| arthrodesis |
45.54 |
12 |
19092614 (3), 12205422 (2), 10101812 (1), 17588821 (1) (see all 9) |
| spinal stenosis |
43.24 |
10 |
15672240 (2), 12908103 (2), 10232555 (1), 17669279 (1) (see all 6) |
| osteosarcoma |
42.39 |
24 |
9322936 (3), 9069169 (2), 10716620 (2), 9565067 (2) (see all 10) |
| spondylolisthesis |
41.56 |
3 |
15672240 (1), 15534410 (1), 12908103 (1) |
| renal disease |
40.54 |
40 |
15199292 (5), 18508541 (3), 16686760 (2), 12594282 (2) (see all 17) |
| pseudarthrosis |
38.15 |
12 |
16601593 (3), 17977189 (2), 16365133 (1), 16510831 (1) (see all 5) |
| ossification heterotopic |
35.29 |
2 |
19043134 (1), 17482003 (1) |
About this table
Human Gene Mutation Database: BMP7 Human Genome Epidemiology Navigator: BMP7 (5 documents)
|
Medical News for BMP7(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for BMP7 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/468 PubMed articles for BMP7 gene (see all 468
):- Three-dimensional structure of recombinant human osteogenic protein 1: structural paradigm for the transforming growth factor beta superfamily. (PubMed id 8570652)1, 3, 4 Griffith D.L.... Carlson W.D. (1996)
- A bone morphogenetic protein subfamily: chromosomal localization of human genes for BMP5, BMP6, and BMP7. (PubMed id 1427904)1, 2, 3 Hahn G.V....Kaplan F.S. (1992)
- OP-1 cDNA encodes an osteogenic protein in the TGF-beta family. (PubMed id 2357959)1, 3, 4 Oezkaynak E.... Oppermann H. (1990)
- Identification of transforming growth factor beta family members present in bone-inductive protein purified from bovine bone. (PubMed id 2263636)1, 3, 4 Celeste A.J.... Wozney J.M. (1990)
- USAG-1: a bone morphogenetic protein antagonist abundantly expressed in the kidney. (PubMed id 15020244)3, 4 Yanagita M.... Sakurai T. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- The DNA sequence and comparative analysis of human chromosome 20. (PubMed id 11780052)3, 4 Deloukas P....Rogers J. (2001)
- Modulation of endogenous osteogenic protein-1 (OP-1) by interleukin-1 in adult human articular cartilage. (PubMed id 12925612)1, 3 Merrihew C....Chubinskaya S. (2003)
- Age-related changes in cartilage endogenous osteogenic protein-1 (OP-1). (PubMed id 12385776)1, 3 Chubinskaya S....Kuettner K.E. (2002)
- BMP7 influences proliferation, migration, and invasion of breast cancer cells. (PubMed id 18980801)1, 3 Alarmo E.L....Kallioniemi A. (2009)
|
Search for BMP7
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing BMP7
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing BMP7
(According to HUGE)
About This Section
| -- |
Specialized Databases showing BMP7(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for BMP7(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for BMP7:

 | |
 | | | | |
|
 |  |  |
| Antibodies & Assays for BMP7  |
| | Recombinant Proteins (BMP7) | | Antibodies (BMP7) |
| | | Search Tocris compounds for BMP7 |
|
 |
 | | | |
GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
|