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Aliases & Descriptions for BLMH
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| BH 1, 2, 3 | | BMH 2, 3, 5 | | EC 3.4.22.40 3 |
| | | Descriptions |
|---|
| BLM hydrolase 3 | | bleomycin hydrolase 2 |
|
| | Search outside databases for aliases for BLMH genePrevious GC identifers: GC17M028328 GC17M030481 GC17M028720 |
Summaries for BLMH(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for BLMH: Bleomycin hydrolase (BMH) is a cytoplasmic cysteine peptidase that is highly conserved through evolution; however, the only known activity of the enzyme is metabolic inactivation of the glycopeptide bleomycin (BLM), an essential component of combination chemotherapy regimens for cancer. The protein contains the signature active site residues of the cysteine protease papain superfamily. [provided by RefSeq] UniProtKB/Swiss-Prot: BLMH_HUMAN, Q13867Function: The normal physiological role of BLM hydrolase is unknown, but it catalyzes the inactivation of the antitumor drug BLM (a glycopeptide) by hydrolyzing the carboxamide bond of its B-aminoalaninamide moiety thus protecting normal and malignant cells from BLM toxicity (By similarity) |
Genomic Location for BLMH
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the BLMH gene 
Entrez Gene cytogenetic band: 17q11.2 Ensembl cytogenetic band: 17q11.2 HGNC cytogenetic band: 17q11.2BLMH Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 17 GeneLoc Exon Structure GeneLoc location for GC17M025599:
(about GC identifiers)
Start:
|
25,599,349 bp from pter |
End:
|
25,643,204 bp from pter |
Size:
|
43,856 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000017.9 NT_010799.14
| Proteins for BLMH
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: BLMH_HUMAN, Q13867 (See
protein sequence)Recommended Name: Bleomycin hydrolase Size: 455 amino acids; 52562 Da
Subunit: Homohexamer
Subcellular location: Cytoplasm
PDB structure from and Proteopedia :1CB5 (3D)
 2CB5 (3D)
 
Secondary accessions: Q53F86 Q9UER9Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_000377.1
ENSEMBL proteins: ENSP00000261714 ENSP00000378296
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for BLMH: Assays for BLMH: | Protein
Domains/ Families for BLMH(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q13867
ProtoNet protein and cluster: Q13867 1 Blocks protein family: IPB004134 Peptidase C1-like family
UniProtKB/Swiss-Prot: BLMH_HUMAN, Q13867Similarity: Belongs to the peptidase C1 family | Gene Function for BLMH
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000386
Applied Biosystems Silencer® siRNAs for BLMH
Sigma-Aldrich siRNA and siRNA Panels for BLMH  Sigma-Aldrich shRNA for BLMH  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000386                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000386                                  untagged cDNA clone in CMV expression vector: NM_000386 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000386
UniProtKB/Swiss-Prot: BLMH_HUMAN, Q13867Function: The normal physiological role of BLM hydrolase is unknown, but it catalyzes the inactivation of the antitumor drug BLM (a glycopeptide) by hydrolyzing the carboxamide bond of its B-aminoalaninamide moiety thus protecting normal and malignant cells from BLM toxicity (By similarity)Catalytic activity: Inactivates bleomycin B2 (a cytotoxic glycometallopeptide) by hydrolysis of a carboxyamide bond of beta-aminoalanine, but also shows general aminopeptidase activity. The specificity varies somewhat with source, but amino acid arylamides of Met, Leu and Ala are preferredEnzyme Number (IUBMB): EC 3.4.22.40 Genatlas biochemistry entry for BLMH:bleomycin hydrolase,neutral cysteine protease,papain superfamily,widely expressed,maybe involved in bleomycin induced pulmonary fibrosis8 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Blmh):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for BLMH
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 1 Sigma-Aldrich "Your Favorite Gene" Pathway for BLMH (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for BLMH 
5/12 Interacting proteins for BLMH (ENSP000002617143 Q138672) via UniProtKB, MINT, and/or STRING (see all 12
)About this table
3 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for BLMH(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for BLMH 1 Novoseek chemical compound relationship for BLMH gene
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| leucine |
24.77 |
3 |
15187416 (1), 16455981 (1) |
About this table
|
Transcripts for BLMH(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000386
Sigma-Aldrich siRNA and siRNA Panels for BLMH  Sigma-Aldrich shRNA for BLMH  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_000386 REFSEQ mRNAs for BLMH gene: NM_000386.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000386               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000386                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000386                                  untagged cDNA clone in CMV expression vector: NM_000386  Additional cDNA sequence: AF091082.1 AK057600.1 AK223403.1 AK301948.1 AK312896.1 BC003616.2 BT007018.1 X92106.1 17 DOTS entries: DT.101983117 DT.315911 DT.95124813 DT.100807028 DT.95124820 DT.100810339 DT.100810343 DT.100810344 DT.417729 DT.120916053 DT.92458086 DT.75186169 DT.100693584 DT.95124811 DT.95124772 DT.97859808 DT.92458092 24/342 AceView cDNA sequences (see all 342
):CA426434 BQ690347 AI189260 BM463898 W74447 AA631008 CA416026 AA774218 AI056959 BC003616 AI745577 CB114960 BF002346 NM_000386 BQ639431 AA417881 BF055310 BQ072971 BE513584 AU279450 AI318426 BM676957 BM792704 BQ052359
highest scoring ESTs for BLMH:X92106 AA223448 AU077335 AU098904 BM755543 AA071022 AA113907 AL552976 AL559155 AL702789 Unigene Cluster for BLMH: Bleomycin hydrolase Hs.371914 [show with all ESTs]Unigene Representative Sequence: NM_000386
GeneLoc Exon Structure
5/15 Alternative Splicing Database (ASD) splice patterns (SP) for BLMH (see all 15
)
| ExUns: | 1a | · | 1b | · | 1c | ^ | 2a | · | 2b | · | 2c | ^ | 3 | ^ | 4a | · | 4b | · | 4c | ^ | 5a | · | 5b | ^ | 6a | · | 6b | ^ | 7a | · | 7b | · | 7c | · | 7d | ^ | 8a | · | 8b | ^ | 9 | ^ | 10a | · | 10b | ^ | 11a | · | 11b | ^ | 12a | · | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | - |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | |   | |   | - |   | |   | |
| SP4: | |   | |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | - |   | - |   | |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   | - |   |
| ExUns: | 12b | ^ | 13 | ^ | 14a | · | 14b | |
| SP1: | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for BLMH
2 Ensembl transcripts including schematic representations: ENST00000261714
ENST00000394819
|
Expression for BLMH
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| BLMH expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for BLMH
1 / 2 / 3 4 probe-sets matching BLMH gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GTCTCAGTCA
SOURCE GeneReport for Unigene cluster: Hs.371914
Expression variation in blood from EXPOLDB for BLMH |
Orthologs for BLMH
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for BLMH gene from 5/16 species (see all 16
)
About this table Species with no ortholog for BLMH
ENSEMBL Gene Tree for BLMH | Paralogs for BLMH(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for BLMH(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for BLMH (up to first 250kb)
|
Disorders & Mutations for BLMH
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 602403 disorders: 104300 7 Novoseek disease relationships for BLMH gene
About this table
Human Gene Mutation Database: BLMH Genetic Association Database: BLMH Human Genome Epidemiology Navigator: BLMH (8 documents)
|
Medical News for BLMH(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for BLMH (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/59 PubMed articles for BLMH gene (see all 59
):- Cloning and expression analysis of human bleomycin hydrolase, a cysteine proteinase involved in chemotherapy resistance. (PubMed id 8620487)1, 3, 4 Ferrando A.A.... Lopez-Otin C. (1996)
- Genetic variation in the bleomycin hydrolase gene and bleomycin-induced pulmonary toxicity in germ cell cancer patients. (PubMed id 15900213)1, 3, 6 Nuver J....Gietema J.A. (2005)
- Crystal structure of human bleomycin hydrolase, a self- compartmentalizing cysteine protease. (PubMed id 10404591)1, 3, 4 O'Farrell P.A.... Joshua-Tor L. (1999)
- Human bleomycin hydrolase: molecular cloning, sequencing, functional expression, and enzymatic characterization. (PubMed id 8639621)1, 3, 4 Broemme D.... Payan D.G. (1996)
- Gene characterization, promoter analysis, and chromosomal localization of human bleomycin hydrolase. (PubMed id 9407121)1, 2, 3 Ferrando A.A....Lopez-Otin C. (1997)
- Genomic structure and genetic mapping of the human neutral cysteine protease bleomycin hydrolase. (PubMed id 9331073)1, 2, 3 Montoya S.E....Lazo J.S. (1997)
- Lack of replication of association findings in complex disease: an analysis of 15 polymorphisms in prior candidate genes for sporadic Alzheimer's disease. (PubMed id 11436125)1, 3, 6 Prince J.A....Brookes A.J. (2001)
- Genetic risk factors of sporadic Alzheimer's disease among Chinese in Taiwan. (PubMed id 11099722)1, 3, 6 Hu C.J....Chang J.G. (2000)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Genetic polymorphisms of DNA repair and xenobiotic-metabolizing enzymes: role in mutagen sensitivity. (PubMed id 12082022)3, 6 Tuimala J....Norppa H. (2002)
|
Search for BLMH
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing BLMH
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing BLMH
(According to HUGE)
About This Section
| -- |
Specialized Databases showing BLMH(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for BLMH(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for BLMH:

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Incremental update: 13 Oct 2009
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