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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

BIRC7 Gene

protein-coding   GIFtS: 60
GCID: GC20P061867

baculoviral IAP repeat containing 7

(Previous name: baculoviral IAP repeat-containing 7 )
 Explore 55 diseases affiliated with
BIRC7 via our new
 Human Malady Compendium 
Biological research products
for BIRC7
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Baculoviral IAP Repeat Containing 71 2     RING Finger Protein 502 3
KIAP1 2 3 5     Baculoviral IAP Repeat-Containing 71
ML-IAP1 2 3     Mliap1
RNF501 2 3     Baculoviral IAP Repeat-Containing Protein 72
LIVIN2 3 5     Livin Inhibitor Of Apoptosis2
MLIAP2 3 5     EC 6.3.2.-3
Kidney Inhibitor Of Apoptosis Protein2 3     Livin3
Melanoma Inhibitor Of Apoptosis Protein2 3     

External Ids:    HGNC: 137021   Entrez Gene: 794442   Ensembl: ENSG000001011977   OMIM: 6057375   UniProtKB: Q96CA53   

Export aliases for BIRC7 gene to outside databases

Previous GC identifers: GC20P061744 GC20P062546 GC20P062593 GC20P061337 GC20P058592


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for BIRC7:
The protein encoded by this gene is a member of the family of inhibitor of apoptosis proteins (IAP) and contains a
single copy of a baculovirus IAP repeat (BIR) as well as a RING-type zinc finger domain. The BIR domain is essential
for inhibitory activity and interacts with caspases, while the RING finger domain sometimes enhances antiapoptotic
activity but does not inhibit apoptosis alone. Two transcript variants encoding different isoforms have been found for
this gene. The two isoforms have different antiapoptotic properties, with isoform alpha protecting cells from
apoptosis induced by staurosporine and isoform b protecting cells from apoptosis induced by etoposide. (provided by
RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: BIRC7_HUMAN, Q96CA5
Function: Apoptotic regulator capable of exerting proapoptotic and anti-apoptotic activities and plays crucial roles in
apoptosis, cell proliferation, and cell cycle control. Its anti-apoptotic activity is mediated through the inhibition
of CASP3, CASP7 and CASP9, as well as by its E3 ubiquitin-protein ligase activity. As it is a weak caspase inhibitor,
its anti-apoptotic activity is thought to be due to its ability to ubiquitinate DIABLO/SMAC targeting it for
degradation thereby promoting cell survival. May contribute to caspase inhibition, by blocking the ability of
DIABLO/SMAC to disrupt XIAP/BIRC4-caspase interactions. Protects against apoptosis induced by TNF or by chemical
agents such as adriamycin, etoposide or staurosporine. Suppression of apoptosis is mediated by activation of
MAPK8/JNK1, and possibly also of MAPK9/JNK2. This activation depends on TAB1 and NR2C2/TAK1. In vitro, inhibits CASP3
and proteolytic activation of pro-CASP9. Isoform 1 blocks staurosporine-induced apoptosis. Isoform 2 blocks
etoposide-induced apoptosis. Isoform 2 protects against natural killer (NK) cell killing whereas isoform 1 augments
killing

Gene Wiki entry for BIRC7


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000020.10  NC_018931.1  NT_011333.6  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the BIRC7 gene promoter:
         N-Myc   HNF-4alpha2   HNF-4alpha1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidBIRC7 promoter sequence
   Search SABiosciences Chromatin IP Primers for BIRC7

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat BIRC7


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 20q13.3   Ensembl cytogenetic band:  20q13.33   HGNC cytogenetic band: 20q13.3

BIRC7 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
BIRC7 gene location

GeneLoc information about chromosome 20         GeneLoc Exon Structure

GeneLoc location for GC20P061867:  view genomic region     (about GC identifiers)

Start:
61,867,235 bp from pter      End:
61,871,859 bp from pter
Size:
4,625 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: BIRC7_HUMAN, Q96CA5 (See protein sequence)
Recommended Name: Baculoviral IAP repeat-containing protein 7  
Size: 298 amino acids; 32798 Da
Subunit: Binds to CASP9. Interaction with DIABLO/SMAC via the BIR domain disrupts binding to CASP9 and apoptotic
suppressor activity. Interacts with TAB1. In vitro, interacts with CASP3 and CASP7 via its BIR domain
Subcellular location: Nucleus. Cytoplasm. Golgi apparatus. Note=Nuclear, and in a filamentous pattern throughout the
cytoplasm. Full-length livin is detected exclusively in the cytoplasm, whereas the truncated form (tLivin) is found in
the peri-nuclear region with marked localization to the Golgi apparatus; the accumulation of tLivin in the nucleus
shows positive correlation with the increase in apoptosis
6/13 PDB 3D structures from and Proteopedia for BIRC7 (see all 13):
1OXN (3D)        1OXQ (3D)        1OY7 (3D)        1TW6 (3D)        2I3H (3D)        2I3I (3D)    
Secondary accessions: Q9BQV0 Q9H2A8 Q9HAP7
Alternative splicing: 2 isoforms:  Q96CA5-1   Q96CA5-2   

Explore the universe of human proteins at neXtProt for BIRC7: NX_Q96CA5

Post-translational modifications:

  • Autoubiquitinated and undergoes proteasome-mediated degradation1
  • The truncated protein (tLivin) not only loses its anti-apoptotic effect but also acquires a pro-apoptotic effect1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q96CA5

  • BIRC7 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_071444.1  NP_647478.1  

    ENSEMBL proteins: 
     ENSP00000345213   ENSP00000217169   ENSP00000378717  

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    ProSpec Recombinant Protein for BIRC7
    Uscn Proteins for BIRC7

    Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005622intracellular ----
    GO:0005634nucleus IDA17294084
    GO:0005737cytoplasm IDA17294084
    GO:0005794Golgi apparatus IDA17294084


    BIRC7 for ontologies           About GeneDecksing



    BIRC7 Antibody Products: 
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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    BIRC7 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR017907 Znf_RING_CS
     IPR001841 Znf_RING
     IPR001370 BIR
     IPR013083 Znf_RING/FYVE/PHD

    Graphical View of Domain Structure for InterPro Entry Q96CA5

    ProtoNet protein and cluster: Q96CA5

    2 Blocks protein families:
    IPB001370 Baculovirus inhibitor of apoptosis protein repeat (BIR)
    IPB001841 Zn-finger


    UniProtKB/Swiss-Prot: BIRC7_HUMAN, Q96CA5
    Domain: The RING domain is essential for autoubiquitination
    Similarity: Belongs to the IAP family
    Similarity: Contains 1 BIR repeat
    Similarity: Contains 1 RING-type zinc finger


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: BIRC7_HUMAN, Q96CA5
    Function: Apoptotic regulator capable of exerting proapoptotic and anti-apoptotic activities and plays crucial roles in
    apoptosis, cell proliferation, and cell cycle control. Its anti-apoptotic activity is mediated through the inhibition
    of CASP3, CASP7 and CASP9, as well as by its E3 ubiquitin-protein ligase activity. As it is a weak caspase inhibitor,
    its anti-apoptotic activity is thought to be due to its ability to ubiquitinate DIABLO/SMAC targeting it for
    degradation thereby promoting cell survival. May contribute to caspase inhibition, by blocking the ability of
    DIABLO/SMAC to disrupt XIAP/BIRC4-caspase interactions. Protects against apoptosis induced by TNF or by chemical
    agents such as adriamycin, etoposide or staurosporine. Suppression of apoptosis is mediated by activation of
    MAPK8/JNK1, and possibly also of MAPK9/JNK2. This activation depends on TAB1 and NR2C2/TAK1. In vitro, inhibits CASP3
    and proteolytic activation of pro-CASP9. Isoform 1 blocks staurosporine-induced apoptosis. Isoform 2 blocks
    etoposide-induced apoptosis. Isoform 2 protects against natural killer (NK) cell killing whereas isoform 1 augments
    killing

    Enzyme Number (IUBMB): EC 6.3.2.-1

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    Gene Ontology (GO): 5 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0004842ubiquitin-protein ligase activity IDA16729033
    GO:0004869cysteine-type endopeptidase inhibitor activity TAS--
    GO:0005515protein binding IPI11801603
    GO:0008270zinc ion binding IEA--
    GO:0019899enzyme binding NAS11801603


    BIRC7 for ontologies           About GeneDecksing


    2 GenomeRNAi human phenotypes for BIRC7:
     Increased gamma-H2AX phosphory  Lamellipodia cells 


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Apoptosis and Autophagy
    Apoptosis and Autophagy1.00
    2Apoptosis Modulation and Signaling
    Apoptosis Modulation and Signaling1.00
    3Apoptosis and survival_Apoptotic TNF-family pathways
    Apoptosis Signaling Pathways0.35

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 R&D Systems Pathway for BIRC7
        Apoptosis Signaling Pathways


    1 Cell Signaling Technology (CST) Pathway for BIRC7
        Apoptosis and Autophagy

    1 BioSystems Pathway for BIRC7 
        Apoptosis Modulation and Signaling



    BIRC7 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for BIRC7

    STRING Interaction Network Preview (showing 5 interactants - click image to see 14)

    5/17 Interacting proteins for BIRC7 (Q96CA51, 3 ENSP000002171694) via UniProtKB, MINT, STRING, and/or I2D (see all 17)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    DIABLOQ9NR281, 3, ENSP000002671694EBI-517623,EBI-517508 I2D: score=3 STRING: ENSP00000267169
    HTRA2O434641, 3, ENSP000002580804EBI-517623,EBI-517086 I2D: score=2 STRING: ENSP00000258080
    CASP9P552111, 3, ENSP000003302374EBI-517623,EBI-516799 I2D: score=3 STRING: ENSP00000330237
    CASP3P425743, ENSP000003110324I2D: score=3 STRING: ENSP00000311032
    XAF1Q6GPH43, ENSP000003548224I2D: score=2 STRING: ENSP00000354822
    About this table

    Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006309apoptotic DNA fragmentation NAS11024045
    GO:0007257activation of JUN kinase activity NAS11865055
    GO:0016567protein ubiquitination IDA16729033
    GO:0042127regulation of cell proliferation IDA--
    GO:0043066negative regulation of apoptotic process NAS11162435


    BIRC7 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    BIRC7 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
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    Browse Tocris compounds for BIRC7
    7 Novoseek chemical compound relationships for BIRC7 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    ciap2 85.9 4 19269012 (2), 16892011 (1), 16957584 (1)
    ciap1 85.1 4 19269012 (2), 16892011 (1), 16957584 (1)
    etoposide 45.6 6 17437058 (1), 11162435 (1), 16965834 (1), 20171199 (1) (see all 5)
    cisplatin 44.8 2 16806840 (2)
    doxorubicin 27.4 1 14614456 (1)
    5fluorouracil 0 1 17437058 (1)
    serine 0 2 16806840 (1), 16038965 (1)

    Search CenterWatch for drugs/clinical trials and news about BIRC7 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
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    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for BIRC7 gene (2 alternative transcripts): 
    NM_022161.2  NM_139317.1  

    Unigene Cluster for BIRC7:

    Baculoviral IAP repeat containing 7
    Hs.256126  [show with all ESTs]
    Unigene Representative Sequence: AY358836
    3 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000342412 ENST00000217169(uc010gkc.1 uc002yej.3 uc002yei.3)
    ENST00000395306

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    Additional cDNA sequence: 

    AF301009.1 AF311388.1 AY358835.1 AY358836.1 AY517497.1 BC014475.1 

    4 DOTS entries:

    DT.100741536  DT.100027554  DT.102820976  DT.91800145 

    24/67 AceView cDNA sequences (see all 67):

    BM717934 AA379765 BU195879 BQ877438 CD673774 BQ676590 AF301009 BQ892691 
    BQ682897 BM704611 BM700577 BU172109 BQ682827 NM_139317 NM_022161 BF726384 
    BQ682378 BC014475 BQ681718 AF311388 CB113932 AY358836 BU737800 AY358835 

    GeneLoc Exon Structure

    5/6 Alternative Splicing Database (ASD) splice patterns (SP) for BIRC7 (see all 6)    About this scheme

    ExUns: 1a · 1b ^ 2a · 2b ^ 3a · 3b · 3c ^ 4 ^ 5 ^ 6a · 6b · 6c · 6d ^ 7a · 7b
    SP1:              -           -                                                               
    SP2:              -           -                             -     -                           
    SP3:              -           -                                                               
    SP4:                          -                             -     -                           
    SP5:                                                        -     -                           


    ECgene alternative splicing isoforms for BIRC7

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    BIRC7 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GCCGGCCAGG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See BIRC7 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for BIRC7

    SOURCE GeneReport for Unigene cluster: Hs.256126

    UniProtKB/Swiss-Prot: BIRC7_HUMAN, Q96CA5
    Tissue specificity: Isoform 1 and isoform 2 are expressed at very low levels or not detectable in most adult tissues.
    Detected in adult heart, placenta, lung, lymph node, spleen and ovary, and in several carcinoma cell lines. Isoform 2
    is detected in fetal kidney, heart and spleen, and at lower levels in adult brain, skeletal muscle and peripheral
    blood leukocytes

        SABiosciences Expression via Pathway-Focused PCR Arrays including BIRC7: 
              Apoptosis 384HT in human mouse rat
              Ubiquitin Ligases in human mouse rat

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    In Situ
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for BIRC7

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of chordates.

    Orthologs for BIRC7 gene from 4/15 species (see all 15)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves BIRC76
    Uncharacterized protein
    34(a)
    1 ↔ 1
    20(8709017-8717829)
    lizard
    (Anolis carolinensis)
    Reptilia BIRC76
    --
    22(a)
    1 ↔ 1
    4(153270174-153278000)
    African clawed frog
    (Xenopus laevis)
    Amphibia XLX2 IAP-like protein 73.19(n)    AF468029.1 
    zebrafish
    (Danio rerio)
    Actinopterygii birc76
    baculoviral IAP repeat-containing 7
    24(a)
    1 ↔ 1
    23(14329498-14346904)


    ENSEMBL Gene Tree for BIRC7 (if available)
    TreeFam Gene Tree for BIRC7 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for BIRC7 gene
    BIRC32  BIRC22  XIAP2  BIRC82  
    5 SIMAP similar genes for BIRC7 using alignment to 3 protein entries:     BIRC7_HUMAN (see all proteins):
    ILP3    BIRC3    BIRC2    NAIP    BIRC5

    BIRC7 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/183 NCBI SNPs in BIRC7 are shown (see all 183    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 20 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs798673961,2
    F,--58590123(+) ACACCC/TGGGGT 2 -- us2k11Minor allele frequency- T:0.02WA 118
    rs119078871,2
    C,F,H,--58590132(+) GTTTTG/ACTGAA 2 -- us2k18Minor allele frequency- A:0.06NS EA WA NA CSA 533
    rs119055921,2
    C,H,--58590169(+) gggggC/Tggtgg 2 -- us2k14Minor allele frequency- T:0.21WA NA CSA 123
    rs60108751,2
    A,--58590395(+) GACAGA/C/GGAGGG 2 -- us2k1 trp30--------
    rs739190971,2
    C,F,--58590642(+) CCACAC/ACCTTC 2 -- us2k13Minor allele frequency- A:0.15WA CSA 122
    rs1155355261,2
    C,F,--58590772(+) TGGGAG/AGGCGG 2 -- us2k11Minor allele frequency- A:0.02WA 118
    rs799273301,2
    --58590925(+) GCTAAC/GCCTCT 2 -- us2k12Minor allele frequency- G:0.15CSA WA 120
    rs60903181,2
    C,F,H,--58590943(+) ACCTGC/TGCTCC 2 -- us2k17Minor allele frequency- T:0.04NS NA WA 906
    rs60903191,2
    F,--58591016(+) TGCACG/CCTCCC 2 -- us2k11Minor allele frequency- C:0.03WA 118
    rs731514821,2
    C,F,--58591130(+) GGGGTT/GGGGGG 2 -- us2k12Minor allele frequency- G:0.09WA NA 238

    HapMap Linkage Disequilibrium report for BIRC7 (61867235 - 61871859 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 11 variations for BIRC7
         11 CNVs: 5148 5147 31044 59579 50711 53414 53464 59580 30133 30134 50710

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    BIRC7 for disorders           About GeneDecksing

    OMIM gene information: 605737    OMIM disorders: --

    20/55 diseases for BIRC7 (see all 55):    About MalaCards
    melanoma    testicular germ cell tumor    malignant pleural mesothelioma    non-hodgkin lymphoma
    bladder transitional cell carcinoma    germ cell tumor    transitional cell carcinoma    squamous cell carcinoma
    laryngeal squamous cell carcinoma    adenoid cystic carcinoma    oral squamous cell carcinoma    lymphocytic leukemia
    hodgkin's lymphoma    pleomorphic adenoma    newcastle disease    acute lymphoblastic leukemia
    chronic lymphocytic leukemia    acute lymphocytic leukemia    malignant mesothelioma    lymphoblastic leukemia

    1 disease from the University of Copenhagen DISEASES database for BIRC7:
    Melanoma

    10/15 Novoseek disease relationships for BIRC7 gene (see all 15)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    melanoma 50.4 28 16806840 (4), 14559822 (3), 12626761 (3), 17618569 (2) (see all 14)
    tumors 42.6 56 16328668 (4), 18340356 (4), 17672950 (3), 19914791 (3) (see all 27)
    cancer 41.9 20 19074843 (2), 16026775 (2), 11024045 (2), 20150841 (1) (see all 12)
    t-all 34.1 2 15492285 (1), 15580304 (1)
    primary tumor 28.9 2 18853322 (1), 16328668 (1)
    leukemia lymphocytic chronic 28.3 1 15492285 (1)
    carcinoma renal cell 27.7 10 17656204 (2), 17968430 (2), 17519534 (2), 17437058 (1) (see all 5)
    nsclc 27 20 16965834 (5), 17660948 (2), 18827979 (2), 15541814 (1) (see all 5)
    solid tumor 20 3 18278467 (1), 12488298 (1), 16840203 (1)
    cancer lung 17.2 9 15829321 (2), 16409786 (1), 17660948 (1), 19671483 (1) (see all 6)

    Human Genome Epidemiology (HuGE) Navigator: BIRC7 (1 document)

    Export disorders for BIRC7 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for BIRC7 gene, integrated from 9 sources (see all 133):
    (articles sorted by number of sources associating them with BIRC7)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Livin, a novel inhibitor of apoptosis protein family member. (PubMed id 11024045)1, 2, 3, 9 Kasof G.M. and Gomes B.C. (2001)
    2. KIAP, a novel member of the inhibitor of apoptosis protein family. (PubMed id 11162435)1, 2, 3, 9 Lin J.H....Morser J. (2000)
    3. Livin promotes Smac/DIABLO degradation by ubiquitin-proteasome pathway. (PubMed id 16729033)1, 2, 9 Ma L....Wu M. (2006)
    4. Challenge and promise: roles for Livin in progression and therapy of cancer. (PubMed id 19074843)1, 2, 9 Wang L....Shan B. (2008)
    5. Subcellular localization determines the delicate balance between the anti- and pro-apoptotic activity of Livin. (PubMed id 17294084)1, 2, 9 Nachmias B....Ben-Yehuda D. (2007)
    6. Manipulation of NK cytotoxicity by the IAP family member Livin. (PubMed id 18034418)1, 2, 9 Nachmias B....Mandelboim O. (2007)
    7. Two splicing variants of a new inhibitor of apoptosis gene with different biological properties and tissue distribution pattern. (PubMed id 11322947)1, 2, 9 Ashhab Y.... Yehuda D.B. (2001)
    8. Research progress on Livin protein: an inhibitor of apoptosis. (PubMed id 21617971)1, 2 Yan B. (2011)
    9. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    10. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PubMed id 12975309)1, 2 Clark H.F.... Gray A.M. (2003)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 79444 HGNC: 13702 AceView: BIRC7 Ensembl:ENSG00000101197 euGenes: HUgn79444
    ECgene: BIRC7 H-InvDB: BIRC7

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for BIRC7 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for BIRC7 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for BIRC7 gene:
    Search GeneIP for patents involving BIRC7

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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