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Aliases for BIRC6-AS2 Gene

Subcategory (RNA class) for BIRC6-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for BIRC6-AS2 Gene

  • BIRC6 Antisense RNA 2 2 3 5
  • Linc-Birc6 3
  • Megamind 3

External Ids for BIRC6-AS2 Gene

Summaries for BIRC6-AS2 Gene

GeneCards Summary for BIRC6-AS2 Gene

BIRC6-AS2 (BIRC6 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BIRC6-AS2 Gene

Genomics for BIRC6-AS2 Gene

Genomic Location for BIRC6-AS2 Gene

Chromosome:
2
Start:
32,557,520 bp from pter
End:
32,574,818 bp from pter
Size:
17,299 bases
Orientation:
Minus strand

Genomic View for BIRC6-AS2 Gene

Genes around BIRC6-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BIRC6-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BIRC6-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for BIRC6-AS2 Gene

No data available for Regulatory Elements for BIRC6-AS2 Gene

Proteins for BIRC6-AS2 Gene

Post-translational modifications for BIRC6-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BIRC6-AS2 Gene

Domains & Families for BIRC6-AS2 Gene

Gene Families for BIRC6-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with BIRC6-AS2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BIRC6-AS2 Gene

Function for BIRC6-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BIRC6-AS2 Gene

Localization for BIRC6-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BIRC6-AS2 Gene

Pathways & Interactions for BIRC6-AS2 Gene

SuperPathways for BIRC6-AS2 Gene

No Data Available

Interacting Proteins for BIRC6-AS2 Gene

Gene Ontology (GO) - Biological Process for BIRC6-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BIRC6-AS2 Gene

Drugs & Compounds for BIRC6-AS2 Gene

No Compound Related Data Available

Transcripts for BIRC6-AS2 Gene

mRNA/cDNA for BIRC6-AS2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BIRC6-AS2 Gene

No ASD Table

Relevant External Links for BIRC6-AS2 Gene

GeneLoc Exon Structure for
BIRC6-AS2
ECgene alternative splicing isoforms for
BIRC6-AS2

Expression for BIRC6-AS2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for BIRC6-AS2 Gene

Orthologs for BIRC6-AS2 Gene

Evolution for BIRC6-AS2 Gene

ENSEMBL:
Gene Tree for BIRC6-AS2 (if available)
TreeFam:
Gene Tree for BIRC6-AS2 (if available)

No data available for Orthologs for BIRC6-AS2 Gene

Paralogs for BIRC6-AS2 Gene

No data available for Paralogs for BIRC6-AS2 Gene

Variants for BIRC6-AS2 Gene

Sequence variations from dbSNP and Humsavar for BIRC6-AS2 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000273740 -- 32,566,265(+) AACAT(A/G)AATAG intron-variant
rs1000344160 -- 32,560,724(+) ACCAT(A/G)CCCAG intron-variant
rs1000676113 -- 32,559,519(+) AAGAT(A/T)GAAGT intron-variant
rs1000816229 -- 32,561,320(+) CACTG(C/T)AACCT intron-variant
rs1000935914 -- 32,559,273(+) CACTT(G/T)CCTGG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for BIRC6-AS2 Gene

Variant ID Type Subtype PubMed ID
dgv1109e212 CNV gain 25503493
dgv3749n100 CNV gain 25217958
dgv3750n100 CNV gain 25217958
dgv443n27 CNV gain 19166990
dgv6750n54 CNV gain 21841781
esv2422335 CNV duplication 17116639
esv2422472 CNV duplication 17116639
esv2751888 CNV gain 17911159
esv2763243 CNV gain 21179565
esv3590249 CNV gain 21293372
esv3590254 CNV gain 21293372
esv3891703 CNV gain 25118596
nsv1005939 CNV gain 25217958
nsv456108 CNV gain 19166990
nsv470447 CNV loss 18288195
nsv470448 CNV gain 18288195
nsv516173 CNV gain+loss 19592680
nsv581274 CNV gain 21841781
nsv581281 CNV gain 21841781
nsv833681 CNV gain+loss 17160897
nsv833692 CNV loss 17160897

Relevant External Links for BIRC6-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BIRC6-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for BIRC6-AS2 Gene

Disorders for BIRC6-AS2 Gene

Relevant External Links for BIRC6-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
BIRC6-AS2

No disorders were found for BIRC6-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for BIRC6-AS2 Gene

Publications for BIRC6-AS2 Gene

  1. Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution. (PMID: 22196729) Ulitsky I. … Bartel D.P. (Cell 2011) 2 3 64

Products for BIRC6-AS2 Gene

Sources for BIRC6-AS2 Gene

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