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Aliases for BIRC6-AS1 Gene

Subcategory (RNA class) for BIRC6-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for BIRC6-AS1 Gene

  • BIRC6 Antisense RNA 1 2 3 5
  • BIRC6 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Pal3 3

External Ids for BIRC6-AS1 Gene

Previous GeneCards Identifiers for BIRC6-AS1 Gene

  • GC02M032603

Summaries for BIRC6-AS1 Gene

GeneCards Summary for BIRC6-AS1 Gene

BIRC6-AS1 (BIRC6 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for BIRC6-AS1 Gene

Genomics for BIRC6-AS1 Gene

Regulatory Elements for BIRC6-AS1 Gene

Enhancers for BIRC6-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F032378 1.1 Ensembl 0.8 +1.3 1299 0.2 RAD51 BIRC6-AS1 GC02M032356
GH02F032367 0.4 Ensembl 0.4 +11.6 11598 0.8 HDGF TFDP1 ATF1 ZNF740 DDX20 ADNP KDM1A GC02M032356 BIRC6-AS1
GH02F032364 0.2 Ensembl 0.4 +15.0 14999 0.8 ZNF384 ZNF600 KDM1A ZNF644 HOMEZ GC02M032356 BIRC6-AS1
GH02F032360 0.8 Ensembl 0.3 +18.9 18928 0.3 IKZF1 HMBOX1 JUNB GC02M032356 BIRC6-AS1
GH02F032363 0.2 Ensembl 0.3 +16.2 16199 0.8 ATF1 MTA2 IKZF1 CEBPA ZMYM3 TBX21 GC02M032356 BIRC6-AS1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around BIRC6-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for BIRC6-AS1 Gene

Chromosome:
2
Start:
32,377,631 bp from pter
End:
32,379,599 bp from pter
Size:
1,969 bases
Orientation:
Minus strand

Genomic View for BIRC6-AS1 Gene

Genes around BIRC6-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
BIRC6-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for BIRC6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for BIRC6-AS1 Gene

Proteins for BIRC6-AS1 Gene

Post-translational modifications for BIRC6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for BIRC6-AS1 Gene

Domains & Families for BIRC6-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for BIRC6-AS1 Gene

Function for BIRC6-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for BIRC6-AS1 Gene

Localization for BIRC6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for BIRC6-AS1 Gene

Pathways & Interactions for BIRC6-AS1 Gene

SuperPathways for BIRC6-AS1 Gene

No Data Available

Interacting Proteins for BIRC6-AS1 Gene

Gene Ontology (GO) - Biological Process for BIRC6-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for BIRC6-AS1 Gene

Transcripts for BIRC6-AS1 Gene

mRNA/cDNA for BIRC6-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for BIRC6-AS1 Gene

No ASD Table

Relevant External Links for BIRC6-AS1 Gene

GeneLoc Exon Structure for
BIRC6-AS1
ECgene alternative splicing isoforms for
BIRC6-AS1

Expression for BIRC6-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for BIRC6-AS1 Gene

genes like me logo Genes that share expression patterns with BIRC6-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for BIRC6-AS1 Gene

Orthologs for BIRC6-AS1 Gene

Evolution for BIRC6-AS1 Gene

ENSEMBL:
Gene Tree for BIRC6-AS1 (if available)
TreeFam:
Gene Tree for BIRC6-AS1 (if available)

No data available for Orthologs for BIRC6-AS1 Gene

Paralogs for BIRC6-AS1 Gene

No data available for Paralogs for BIRC6-AS1 Gene

Variants for BIRC6-AS1 Gene

Relevant External Links for BIRC6-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
BIRC6-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for BIRC6-AS1 Gene

Disorders for BIRC6-AS1 Gene

No disorders were found for BIRC6-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for BIRC6-AS1 Gene

Publications for BIRC6-AS1 Gene

  1. Conserved function of lincRNAs in vertebrate embryonic development despite rapid sequence evolution. (PMID: 22196729) Ulitsky I. … Bartel D.P. (Cell 2011) 2 3 64

Products for BIRC6-AS1 Gene

Sources for BIRC6-AS1 Gene

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