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Aliases & Descriptions for BIRC5
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases API4 2 , 3 EPR-1 1 , 2 IAP4 3
Descriptions Apoptosis inhibitor 4 1 , 2 , 3 Apoptosis inhibitor survivin 3 baculoviral IAP repeat-containing 5 2 baculoviral IAP repeat-containing protein 5 2 survivin variant 3 alpha 2
Search outside databases for aliases for BIRC5 genePrevious GC identifers: GC17M076124 GC17P079197 GC17P076671 GC17P076808 GC17P076809
Summaries for BIRC5 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for BIRC5 : This gene is a member of the inhibitor of apoptosis (IAP) gene family, which encode negativeregulatory proteins that prevent apoptotic cell death. IAP family members usually contain multiplebaculovirus IAP repeat (BIR) domains, but this gene encodes proteins with only a single BIRdomain. The encoded proteins also lack a C-terminus RING finger domain. Gene expression is highduring fetal development and in most tumors yet low in adult tissues. Antisense transcripts areinvolved in the regulation of this gene's expression. At least four transcript variantsencoding distinct isoforms have been found for this gene, but the full-length natures of onlythree of them have been determined. [provided by RefSeq] UniProtKB/Swiss-Prot: BIRC5_HUMAN, O15392 Function : May play a role in neoplasia. May counteract a default induction of apoptosis in G2/Mphase. Interacts with tubulin. Inhibitor of caspase-3 and caspase-7. Component of the chromosomalpassenger complex (CPC), a complex that acts as a key regulator of mitosis. The CPC complex hasessential functions at the centromere in ensuring correct chromosome alignment and segregation andis required for chromatin-induced microtubule stabilization and spindle assembly. Isoforms 2 and 3do not appear to play vital roles in mitosis. Isoform 3 shows a marked reduction in itsanti-apoptotic effects when compared with the displayed wild-type isoform
Gene Wiki entry for BIRC5 (Survivin)
Genomic Location for BIRC5
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the BIRC5 gene Entrez Gene cytogenetic band: 17q25 Ensembl cytogenetic band: 17q25.3 HGNC cytogenetic band: 17q25 BIRC5 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 17 GeneLoc Exon Structure
GeneLoc location for GC17P073722:
(about GC identifiers )
Start:
73,721,872 bp from pter
End:
73,733,311 bp from pter
Size:
11,440 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000017.9 NT_010641.15 Proteins for BIRC5
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: BIRC5_HUMAN, O15392 (See
protein sequence )Recommended Name: Baculoviral IAP repeat-containing protein 5 Size : 142 amino acids; 16390 Da
Subunit : Homodimer. When phosphorylated, interacts with HBXIP; the resulting complex bindspro-caspase-9, as well as active caspase-9, but much less efficiently. Component of the CPC atleast composed of BIRC5/survivin, CDCA8/borealin, INCENP and AURKB/Aurora-B. Interacts with EVI5
Subcellular location : Cytoplasm. Nucleus. Centromere. Note=Localizes on chromosome arms and innercentromeres from prophase through metaphase and then transferring to the spindle midzone andmidbody from anaphase through cytokinesis. Colocalizes with AURKB at mitotic chromosomes
PDB structures from and Proteopedia : 1E31 (3D)
 1F3H (3D)
 1XOX (3D)
 2QFA (3D)
 2RAW (3D)
 2RAX (3D)
 
Secondary accessions : Q2I3N8 Q4VGX0 Q53F61 Q5MGC6 Q6FHL2 Q75SP2 Q9P2W8Alternative splicing : 7 isoforms : O15392-1 O15392-2 O15392-3 O15392-4 O15392-5 O15392-6 O15392-7
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (3 alternative transcripts):
NP_001012270.1 NP_001012271.1 NP_001159.2 ENSEMBL proteins: ENSP00000364086 ENSP00000301633 ENSP00000324180 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: BIRC5 5/13 Gene Ontology (GO) cellular component terms (links to tree view) (see all 13
):
About this table Antibodies for BIRC5: Assays for BIRC5:
Protein
Domains/ Families for BIRC5(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry O15392 ProtoNet protein and cluster: O15392
UniProtKB/Swiss-Prot: BIRC5_HUMAN, O15392 Domain : The BIR repeat is necessary and sufficient for HBXIP bindingSimilarity : Belongs to the IAP familySimilarity : Contains 1 BIR repeat
Gene Function for BIRC5
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001012270 Applied Biosystems Silencer ® siRNAs for BIRC5 Sigma-Aldrich siRNA and siRNA Panels for BIRC5 Sigma-Aldrich shRNA Panels and shRNA for BIRC5 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001012270                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001012270                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001012270  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001012271 UniProtKB/Swiss-Prot: BIRC5_HUMAN, O15392 Function : May play a role in neoplasia. May counteract a default induction of apoptosis in G2/Mphase. Interacts with tubulin. Inhibitor of caspase-3 and caspase-7. Component of the chromosomalpassenger complex (CPC), a complex that acts as a key regulator of mitosis. The CPC complex hasessential functions at the centromere in ensuring correct chromosome alignment and segregation andis required for chromatin-induced microtubule stabilization and spindle assembly. Isoforms 2 and 3do not appear to play vital roles in mitosis. Isoform 3 shows a marked reduction in itsanti-apoptotic effects when compared with the displayed wild-type isoform
7 MGI mutant phenotypes (inferred from 5 alleles ) (MGI details for Birc5) :5/8 Gene Ontology (GO) molecular function terms (links to tree view) (see all 8
):
About this table
Pathways & Interactions for BIRC5
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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2 Sigma-Aldrich "Your Favorite Gene" Pathways for BIRC5 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for BIRC5 5/119 Interacting proteins for BIRC5 (O15392 1 , 2 ENSP00000301633 3 ) via UniProtKB, MINT, and/or STRING (see all 119
)Interactant Interaction Details GeneCard External ID(s) INCENP Q9NQS7 2 , ENSP00000278849 3 MINT-4509563 MINT-4509570 MINT-77929 STRING (score=.999 ) CASP9 P55211 1 , ENSP00000330237 3 EBI-518823, EBI-516799 STRING (score=.971 ) CDC2 P06493 1 , ENSP00000362917 3 EBI-518823, EBI-444308 STRING (score=.94 ) AURKB Q96GD4 1 , 2 , ENSP00000313950 3 EBI-518842, EBI-624291 MINT-4509558 MINT-4509592 MINT-4509580 EBI-518842, EBI-624291 MINT-4509558 MINT-4509592 MINT-4509580 STRING (score=.999 ) CDCA8 Q53HL2 1 , 2 , ENSP00000316121 3 EBI-518842, EBI-979174 MINT-4509524 MINT-4509575 EBI-518842, EBI-979174 MINT-4509524 MINT-4509575 STRING (score=.999 )
About this table 5/12 Gene Ontology (GO) biological process terms (links to tree view) (see all 12
):
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Drugs & Compounds for BIRC5 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for BIRC5 10/58 Novoseek chemical compound relationships for BIRC5 gene (see all 58
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
ciap2
71.44
9
17255535 (2), 15380346 (2), 17208224 (2), 16957584 (1) (see all 5 )
ponicidin
65.15
5
19330074 (2), 16537182 (2), 17049940 (1)
purvalanol a
64.93
2
17011457 (1), 14988404 (1)
noxa
61.85
8
18712736 (1), 14508115 (1), 17569614 (1), 17038534 (1) (see all 8 )
tetra-o-methylnordihydroguaiaretic acid
61.38
3
17454637 (2), 16890802 (1)
deguelin
56.39
14
18089792 (5), 18593368 (4), 17035597 (2)
17-(allylamino)-17-demethoxygeldanamycin
52.11
6
17510430 (2), 16432177 (1), 18827603 (1)
ciap1
49.75
3
15665297 (2), 16957584 (1)
hedamycin
49.26
13
15637054 (6), 17392340 (1)
lipofectamine
49.24
2
16224667 (1), 18077908 (1)
About this table
Transcripts for BIRC5(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
OriGene , Expression Assays from Applied Biosystems )About This Section
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3 ): NM_001012270 Sigma-Aldrich siRNA and siRNA Panels for BIRC5 Sigma-Aldrich shRNA Panels and shRNA for BIRC5 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001012270 NM_001012271 NM_001168
REFSEQ mRNAs for BIRC5 gene (3 alternative transcripts): NM_001012270.1 NM_001012271.1 NM_001168.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001012270 NM_001012271 NM_001168
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 3 ): NM_001012270                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 3 ): NM_001012270                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001012270  
Additional cDNA sequence: AB028869.1 AB154416.1 AF077350.1 AF086186.1 AK223428.1 AK301793.1 AK311917.1 AY830084.1 AY927772.1 BC000784.2 BC008718.2 BC034148.1 BC065497.1 CR541740.1 CR592187.1 CR593999.1 CR602197.1 CR603892.1 CR605755.1 CR607868.1 CR612752.1 CR619419.1 CR621516.1 CR624931.1 DQ227257.1 DQ310375.1 DQ310376.1 DQ310377.1 DQ310378.1 DQ310379.1 DQ508245.1 DQ508246.1 DQ508247.1 DQ508248.1 DQ508249.1 L26245.1 L32866.1
19 DOTS entries : DT.100722905 DT.100869111 DT.453571 DT.100655157 DT.100637750 DT.100038157 DT.120915604 DT.92462361 DT.100733093 DT.40106138 DT.100655167 DT.100853297 DT.101980495 DT.95162876 DT.95162880 DT.97775214 DT.100655161 DT.120915600 DT.121117749
24/516 AceView cDNA sequences (see all 516
):L32866 BF953213 CR611538 CR612752 CR619419 BE858078 BF440043 AI718433 BE395154 AI936819 CR621516 CR593999 AI364358 CR602197 CR603892 BQ962876 BF953215 AF077350 CR624931 AW247335 AF086186 AI220081 BF345645 BE206066
highest scoring ESTs for BIRC5 :AA159549 AA307813 AA307937 AA315266 AA351941 AA459505 AA460859 AA506522 AA931155 AB028869
Unigene Cluster for BIRC5: Baculoviral IAP repeat-containing 5 Hs.514527 [show with all ESTs ] Unigene Representative Sequence: NM_001012271 GeneLoc Exon Structure 5/6 Alternative Splicing Database (ASD) splice patterns (SP) for BIRC5 (see all 6
) ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b · 6c SP1 :           -     -     -         SP2 :           -   -   -     -         SP3 :           -   -   -   -   -         SP4 :                           SP5 :                          
About this scheme ECgene alternative splicing isoforms for BIRC5 3 Ensembl transcripts including schematic representations : ENST00000374948
ENST00000301633
ENST00000350051
Expression for BIRC5
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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BIRC5 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for BIRC5 1 / 2 / 3
7 probe-sets matching BIRC5 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene cluster: Hs.514527 Expression variation in blood from EXPOLDB for BIRC5
UniProtKB/Swiss-Prot: BIRC5_HUMAN, O15392 Tissue specificity : Expressed only in fetal kidney and liver, and to lesser extent, lung and brain.Abundantly expressed in adenocarcinoma (lung, pancreas, colon, breast, and prostate) and inhigh-grade lymphomas. Also expressed in various renal cell carcinoma cell lines
Orthologs for BIRC5
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for BIRC5 gene from 5/11 species (see all 11
)
About this table Species with no ortholog for BIRC5 ENSEMBL Gene Tree for BIRC5 Paralogs for BIRC5 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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--
SNPs/Variants for BIRC5 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for BIRC5 (up to first 250kb)
Disorders & Mutations for BIRC5
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 603352 10/90 Novoseek disease relationships for BIRC5 gene (see all 90
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
cancer
77.41
665
15359286 (5), 17167980 (5), 11956993 (5), 16731740 (4) (see all 99 )
tumors
76.82
953
11150435 (8), 12569609 (7), 16525657 (6), 12240548 (5) (see all 99 )
bladder cancer
61.83
113
14713774 (7), 16778475 (6), 16635519 (4), 11176843 (4) (see all 48 )
nsclc
57.92
143
18192073 (7), 16224523 (6), 16320585 (6), 15163019 (5) (see all 51 )
hepatocellular carcinoma
56.01
64
15195112 (4), 16086872 (3), 18296918 (3), 19173802 (3) (see all 35 )
metastasis
55.90
146
12168867 (5), 15991282 (4), 17094406 (4), 15062058 (4) (see all 83 )
laryngeal squamous cell carcinoma
55.59
23
18998509 (3), 12174930 (2), 15279637 (2), 16375115 (2) (see all 12 )
colon cancer
55.40
45
15685548 (4), 15566647 (4), 12441269 (3), 17270149 (3) (see all 24 )
prostate cancer
54.73
101
15076293 (6), 19435906 (5), 15735703 (5), 14724567 (4) (see all 39 )
breast cancer
54.60
217
17695451 (7), 16876381 (5), 19228734 (5), 18701842 (5) (see all 87 )
About this table Human Genome Epidemiology Navigator: BIRC5 (10 documents)
Medical News for BIRC5 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for BIRC5 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/1572 PubMed articles for BIRC5 gene (see all 1572
): Survivin and the inner centromere protein INCENP show similar cell- cycle localization and gene knockout phenotype. (PubMed id 11084331) 1, 3, 4 Uren A.G....Choo K.H. (2000) Borealin/Dasra B is a cell cycle-regulated chromosomal passenger protein and its nuclear accumulation is linked to poor prognosis for human gastric cancer. (PubMed id 16427043) 1, 3, 4 Chang J.-L.... Chen C.-M. (2006) Survivin-deltaEx3 and survivin-2B: two novel splice variants of the apoptosis inhibitor survivin with different antiapoptotic properties. (PubMed id 10626797) 1, 3, 4 Mahotka C.... Gerharz C.D. (1999) A novel anti-apoptosis gene, survivin, expressed in cancer and lymphoma. (PubMed id 9256286) 1, 3, 4 Ambrosini G.... Altieri D.C. (1997) Survivin mediates targeting of the chromosomal passenger complex to the centromere and midbody. (PubMed id 16239925) 1, 3, 4 Vader G.... Lens S.M.A. (2006) Borealin: a novel chromosomal passenger required for stability of the bipolar mitotic spindle. (PubMed id 15249581) 1, 3, 4 Gassmann R.... Earnshaw W.C. (2004) Molecular analysis of survivin isoforms: evidence that alternatively spliced variants do not play a role in mitosis. (PubMed id 16291752) 1, 3, 4 Noton E.A.... Wheatley S.P. (2006) EVI5 protein associates with the INCENP-aurora B kinase-survivin chromosomal passenger complex and is involved in the completion of cytokinesis. (PubMed id 16764853) 1, 3, 4 Faitar S.L.... Cowell J.K. (2006) Molecular cloning and bioinformatics analysis of a novel spliced variant of survivin from human breast cancer cells. (PubMed id 16329164) 1, 3, 4 Zheng W.... Yang S. (2005) Uncoupling the central spindle-associated function of the chromosomal passenger complex from its role at centromeres. (PubMed id 16436504) 3, 4 Lens S.M.A....Medema R.H. (2006)
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Specialized Databases showing BIRC5 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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Licensable Technologies for BIRC5 gene: Services for BIRC5 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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