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BIRC5 Gene

protein-coding   GIFtS: 62

GC17P073722
baculoviral IAP repeat-containing 5
(Previous name: apoptosis inhibitor 4 )
Symbol approved by the HUGO Gene Nomenclature Committee (HGNC) database
(Previous symbol: API4)
Services    
(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc , and/or 7Ensembl, 8miRBase)
About This Section

Aliases
API4 2, 3
EPR-1 1, 2
IAP4 3
Descriptions
Apoptosis inhibitor 4 1, 2, 3
Apoptosis inhibitor survivin 3
baculoviral IAP repeat-containing 5 2
baculoviral IAP repeat-containing protein 5 2
survivin variant 3 alpha 2
External Ids
HGNC: 5931
Entrez Gene: 3322
UniProtKB: O153923
Ensembl: ENSG000000896857
Search outside databases for aliases for BIRC5 gene

Previous GC identifers: GC17M076124 GC17P079197 GC17P076671 GC17P076808 GC17P076809

(According to Entrez Gene, Wikipedia's Gene Wiki,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

EntrezGene summary for BIRC5:
This gene is a member of the inhibitor of apoptosis (IAP) gene family, which encode negative
regulatory proteins that prevent apoptotic cell death. IAP family members usually contain multiple
baculovirus IAP repeat (BIR) domains, but this gene encodes proteins with only a single BIR
domain. The encoded proteins also lack a C-terminus RING finger domain. Gene expression is high
during fetal development and in most tumors yet low in adult tissues. Antisense transcripts are
involved in the regulation of this gene's expression. At least four transcript variants
encoding distinct isoforms have been found for this gene, but the full-length natures of only
three of them have been determined. [provided by RefSeq]

UniProtKB/Swiss-Prot: BIRC5_HUMAN, O15392
Function: May play a role in neoplasia. May counteract a default induction of apoptosis in G2/M
phase. Interacts with tubulin. Inhibitor of caspase-3 and caspase-7. Component of the chromosomal
passenger complex (CPC), a complex that acts as a key regulator of mitosis. The CPC complex has
essential functions at the centromere in ensuring correct chromosome alignment and segregation and
is required for chromatin-induced microtubule stabilization and spindle assembly. Isoforms 2 and 3
do not appear to play vital roles in mitosis. Isoform 3 shows a marked reduction in its
anti-apoptotic effects when compared with the displayed wild-type isoform

Gene Wiki entry for BIRC5 (Survivin)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to UCSC and Ensembl, Transcription factor binding sites according to SABiosciences)
About This Section

Genomic View:
UCSC Golden Path with GeneCards custom track

 Transcription factor binding sites upstream to the BIRC5 gene  

Entrez Gene cytogenetic band: 17q25   Ensembl cytogenetic band:  17q25.3   HGNC cytogenetic band: 17q25

BIRC5 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)

GeneLoc gene densities for chromosome 17         GeneLoc Exon Structure

GeneLoc location for GC17P073722:     (about GC identifiers)

Start:
73,721,872 bp from pter
End:
73,733,311 bp from pter
Size:
11,440 bases
Orientation:
plus strand
RefSeq DNA sequence:
NC_000017.9  NT_010641.15  
(According to 1UniProtKB, and/or Ensembl, Phosphorylation sites according to 2Phosphosite, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Enzo Life Sciences, Abnova, OriGene and/or, Abcam,
Biochemical Assays by Invitrogen, Millipore, R&D Systems, Cell Signaling Technology, and/or Enzo Life Sciences, Ontologies according to Gene Ontology Consortium 01 Apr 2009 and Entrez Gene, Antibodies by Invitrogen, Millipore, Sigma-Aldrich, R&D Systems, Cell Signaling Technology, Abcam, Abnova, and/or Novus Biologicals)
About This Section

UniProtKB/Swiss-Prot: BIRC5_HUMAN, O15392 (See protein sequence)
Recommended Name: Baculoviral IAP repeat-containing protein 5  
Size: 142 amino acids; 16390 Da
Subunit: Homodimer. When phosphorylated, interacts with HBXIP; the resulting complex binds
pro-caspase-9, as well as active caspase-9, but much less efficiently. Component of the CPC at
least composed of BIRC5/survivin, CDCA8/borealin, INCENP and AURKB/Aurora-B. Interacts with EVI5
Subcellular location: Cytoplasm. Nucleus. Centromere. Note=Localizes on chromosome arms and inner
centromeres from prophase through metaphase and then transferring to the spindle midzone and
midbody from anaphase through cytokinesis. Colocalizes with AURKB at mitotic chromosomes
PDB structures from and Proteopedia :
1E31 (3D)    1F3H (3D)    1XOX (3D)    2QFA (3D)    2RAW (3D)    2RAX (3D)    
Secondary accessions: Q2I3N8 Q4VGX0 Q53F61 Q5MGC6 Q6FHL2 Q75SP2 Q9P2W8
Alternative splicing: 7 isoforms:  O15392-1   O15392-2   O15392-3   O15392-4   O15392-5   O15392-6   O15392-7   

Post-translational modifications:

  • View phosphorylation sites using PhosphoSite2


  • REFSEQ proteins (3 alternative transcripts): 
    NP_001012270.1  NP_001012271.1  NP_001159.2  


    ENSEMBL proteins: 
    ENSP00000364086 ENSP00000301633 ENSP00000324180 


    Human Recombinant Proteins 
    Browse Drug Discovery Central at Invitrogen for human recombinant proteins
    Browse Purified and Recombinant Proteins at Millipore
    Browse Human Recombinant Proteins at Sigma-Aldrich  
    R&D Systems Recombinant & Natural Proteins for BIRC5 (Survivin)
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Recombinant Proteins from Abcam (Survivin 2B, Survivin , Survivin DEx3)
    Human Recombinant Proteins from Abnova (BIRC5)
                  OriGene Purified Recombinant Human Protein: BIRC5 

    5/13 Gene Ontology (GO) cellular component terms (links to tree view) (see all 13 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000775 chromosome, centromeric region ISS--
    GO:0005622 intracellular IEA--
    GO:0005634 nucleus IEA--
    GO:0005694 chromosome IEA--
    GO:0005730NOT nucleolus IDA18029348
    About this table

    Antibodies for BIRC5: 
    Invitrogen Antibodies for BIRC5
    Millipore Mono- and Polyclonal Antibodies for the study of BIRC5
    Sigma-Aldrich Antibody Arrays and Antibodies for BIRC5
    R&D Systems Antibodies for BIRC5 (Survivin)
    Cell Signaling Technology (CST) Antibodies for BIRC5  (survivin)
    Antibodies from Abcam (Survivin 2B, Survivin , Survivin DEx3), each with their AbpromiseSM
    Monoclonal and Polyclonal Antibodies from Abnova (BIRC5)
    Novus Biologicals Antibodies for BIRC5

    Assays for BIRC5: 
    Browse Invitrogen for biochemical assays
    Browse Kits and Assays available from Millipore
    R&D Systems ELISAs for BIRC5 (Survivin)         (see all)
    Cell Signaling Technology (CST) Sandwich ELISA Kits for BIRC5 (survivin)
    Browse biochemical assays available from Enzo Life Sciences

    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    1 InterPro domain/family:
     IPR001370 Prot_inh_I32_IAP


       GeneDecks  BIRC5 for the domains selected above  
    About GeneDecksing

    Graphical View of Domain Structure for InterPro Entry O15392

    ProtoNet protein and cluster: O15392

    UniProtKB/Swiss-Prot: BIRC5_HUMAN, O15392
    Domain: The BIR repeat is necessary and sufficient for HBXIP binding
    Similarity: Belongs to the IAP family
    Similarity: Contains 1 BIR repeat

    (According to MGI Jun 06 2009, UniProtKB, IUBMB,and/or Genatlas,
    shRNA from OriGene, Sigma-Aldrich, RNAi from Sigma-Aldrich,
    RNAi Products, Clones, and Q-PCR Products from Invitrogen, Millipore, OriGene, and/or Abnova, siRNAs from Applied Biosystems, SYBR primers from OriGene, Cell-based Assays from Millipore, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (BIRC5)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (BIRC5)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_001012270

                  Applied Biosystems Silencer® siRNAs for BIRC5

                  Sigma-Aldrich siRNA and siRNA Panels for BIRC5  
                         Sigma-Aldrich shRNA Panels and shRNA for BIRC5  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Clones:Invitrogen Clones for BIRC5
    Browse Clones for the Expression of Recombinant Proteins Available from Millipore
                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 3): NM_001012270
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 3): NM_001012270
                                     untagged cDNA clones in CMV expression vector (see all 3): NM_001012270 

    Primers: Browse Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
                  OriGene genome-wide validated SYBR primer pairs: NM_001012271

    UniProtKB/Swiss-Prot: BIRC5_HUMAN, O15392
    Function: May play a role in neoplasia. May counteract a default induction of apoptosis in G2/M
    phase. Interacts with tubulin. Inhibitor of caspase-3 and caspase-7. Component of the chromosomal
    passenger complex (CPC), a complex that acts as a key regulator of mitosis. The CPC complex has
    essential functions at the centromere in ensuring correct chromosome alignment and segregation and
    is required for chromatin-induced microtubule stabilization and spindle assembly. Isoforms 2 and 3
    do not appear to play vital roles in mitosis. Isoform 3 shows a marked reduction in its
    anti-apoptotic effects when compared with the displayed wild-type isoform

    7 MGI mutant phenotypes (inferred from 5 alleles(MGI details for Birc5):

    cellularembryogenesishematopoietic systemhomeostasis/metabolismimmune system
    lethality-prenatal/perinatalnormal

    5/8 Gene Ontology (GO) molecular function terms (links to tree view) (see all 8 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0008017 microtubule binding ISS--
    GO:0008270 zinc ion binding ISS--
    GO:0042803 protein homodimerization activity ISS--
    GO:0043027 caspase inhibitor activity ISS--
    GO:0046872 metal ion binding IEA--
    About this table

    (Pathways according to Invitrogen (maps by GeneGo), Millipore, Cell Signaling Technology, Sigma-Aldrich, KEGG and/or UniProtKB,
    Sets of similar genes according to GeneDecks, Proteins Network according to SABiosciences, Interactions according to 1UniProtKB, 2MINT, and/or 3STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2009 via Entrez Gene.)
    About This Section

    4 Invitrogen iPath™ Online BioAtlas - Pathways for BIRC5 (Maps provided by GeneGo):
     Angiopoietin - Tie2 signaling
     Antiapoptotic Function of TRADD/TRAF2 complex
     Anti-apoptotic TNFs/NF-kB/IAP pathway
     WNT signaling pathway. Part 2

       GeneDecks  BIRC5 for the pathways selected above  
    About GeneDecksing

    3 Millipore Pathways for BIRC5
     Development Angiopoietin - Tie2 signaling
     Development Thrombopoietin-regulated cell processes
     Apoptosis and survival Anti-apoptotic TNFs/NF-kB/IAP pathway

       GeneDecks  BIRC5 for the pathways selected above  
    About GeneDecksing

    2 Sigma-Aldrich "Your Favorite Gene" Pathways for  BIRC5  (Your Favorite Gene powered by Ingenuity) 
     Angiopoietin Signaling
     p53 Signaling

       GeneDecks  BIRC5 for the pathways selected above  
    About GeneDecksing

    2 Kegg Pathways  (Kegg details for BIRC5):
     hsa05200 Pathways in cancer
     hsa05210 Colorectal cancer

       GeneDecks  BIRC5 for the pathways selected above  
    About GeneDecksing
     Gene Network CentralTM Interacting Genes and Proteins Network for  BIRC5 


    5/119 Interacting proteins for BIRC5 (O153921, 2 ENSP000003016333) via UniProtKB, MINT, and/or STRING (see all 119 )
    InteractantInteraction Details
    GeneCardExternal ID(s)
    INCENPQ9NQS72, ENSP000002788493MINT-4509563 MINT-4509570 MINT-77929 STRING (score=.999)
    CASP9P552111, ENSP000003302373EBI-518823, EBI-516799 STRING (score=.971)
    CDC2P064931, ENSP000003629173EBI-518823, EBI-444308 STRING (score=.94)
    AURKBQ96GD41, 2, ENSP000003139503EBI-518842, EBI-624291 MINT-4509558 MINT-4509592 MINT-4509580 EBI-518842, EBI-624291 MINT-4509558 MINT-4509592 MINT-4509580 STRING (score=.999)
    CDCA8Q53HL21, 2, ENSP000003161213EBI-518842, EBI-979174 MINT-4509524 MINT-4509575 EBI-518842, EBI-979174 MINT-4509524 MINT-4509575 STRING (score=.999)
    About this table

    5/12 Gene Ontology (GO) biological process terms (links to tree view) (see all 12 ):

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000086 G2/M transition of mitotic cell cycle ISS--
    GO:0000910 cytokinesis ISS--
    GO:0006915 apoptosis IEA--
    GO:0006916 anti-apoptosis ISS--
    GO:0007049 cell cycle IEA--
    About this table
    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, Sigma-Aldrich, Tocris Bioscience, and/or Novoseek and Drugs according to Enzo Life Sciences and/or PharmGKB)
    About This Section

    Browse drugs & compounds from Enzo Life Sciences
    Browse Small Molecules at Sigma-Aldrich

    Browse Tocris compounds for BIRC5
    10/58 Novoseek chemical compound relationships for BIRC5 gene (see all 58 )
    Compound   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    ciap2 71.44 9 17255535 (2), 15380346 (2), 17208224 (2), 16957584 (1) (see all 5)
    ponicidin 65.15 5 19330074 (2), 16537182 (2), 17049940 (1)
    purvalanol a 64.93 2 17011457 (1), 14988404 (1)
    noxa 61.85 8 18712736 (1), 14508115 (1), 17569614 (1), 17038534 (1) (see all 8)
    tetra-o-methylnordihydroguaiaretic acid 61.38 3 17454637 (2), 16890802 (1)
    deguelin 56.39 14 18089792 (5), 18593368 (4), 17035597 (2)
    17-(allylamino)-17-demethoxygeldanamycin 52.11 6 17510430 (2), 16432177 (1), 18827603 (1)
    ciap1 49.75 3 15665297 (2), 16957584 (1)
    hedamycin 49.26 13 15637054 (6), 17392340 (1)
    lipofectamine 49.24 2 16224667 (1), 18077908 (1)
    About this table


    (GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 219 Homo sapiens; Jun 2 2009) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView,
    non coding RNAs according to RNAdb,
    ESTs according to GeneTide,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from Invitrogen, Millipore, and/or Abnova,
    siRNAs from Applied Biosystems, Sigma-Aldrich,
    shRNA from Sigma-Aldrich, OriGene,
    Tagged/untagged cDNA clones from OriGene,
    Expression Assays from Applied Biosystems)
    About This Section

    Inhib.
    RNA:
    Invitrogen RNAi Products for gene knock-down (BIRC5)
    Browse for Gene Knock-down Tools from Millipore
    Abnova Chimera RNAi Products for Gene knock-down (BIRC5)
                   OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_001012270

                  Sigma-Aldrich siRNA and siRNA Panels for BIRC5  
                         Sigma-Aldrich shRNA Panels and shRNA for BIRC5  
                         Explore Sigma-Aldrich super-pooled esiRNAs  

    Applied Biosystems Silencer® siRNAs: 

    NM_001012270  NM_001012271  NM_001168  

    REFSEQ mRNAs for BIRC5 gene (3 alternative transcripts): 

    NM_001012270.1   NM_001012271.1   NM_001168.2   

    Applied Biosystems TaqMan ® Gene Expression Assays: 

    NM_001012270  NM_001012271  NM_001168  

                   OriGene GFP tagged cDNA clones in CMV expression vector (see all 3): NM_001012270
                                     Myc/DDK tagged cDNA clones in CMV expression vector (see all 3): NM_001012270
                                     untagged cDNA clones in CMV expression vector (see all 3): NM_001012270 

    Additional cDNA sequence: 

    AB028869.1 AB154416.1 AF077350.1 AF086186.1 AK223428.1 AK301793.1 AK311917.1 AY830084.1 
    AY927772.1 BC000784.2 BC008718.2 BC034148.1 BC065497.1 CR541740.1 CR592187.1 CR593999.1 
    CR602197.1 CR603892.1 CR605755.1 CR607868.1 CR612752.1 CR619419.1 CR621516.1 CR624931.1 
    DQ227257.1 DQ310375.1 DQ310376.1 DQ310377.1 DQ310378.1 DQ310379.1 DQ508245.1 DQ508246.1 
    DQ508247.1 DQ508248.1 DQ508249.1 L26245.1 L32866.1 

    19 DOTS entries:

    DT.100722905  DT.100869111  DT.453571  DT.100655157  DT.100637750  DT.100038157  DT.120915604  DT.92462361 
    DT.100733093  DT.40106138  DT.100655167  DT.100853297  DT.101980495  DT.95162876  DT.95162880  DT.97775214 
    DT.100655161  DT.120915600  DT.121117749 

    24/516 AceView cDNA sequences (see all 516 ):

    L32866 BF953213 CR611538 CR612752 CR619419 BE858078 BF440043 AI718433 
    BE395154 AI936819 CR621516 CR593999 AI364358 CR602197 CR603892 BQ962876 
    BF953215 AF077350 CR624931 AW247335 AF086186 AI220081 BF345645 BE206066 

    highest scoring ESTs for BIRC5:

    AA159549 AA307813 AA307937 AA315266 AA351941 AA459505 AA460859 AA506522 AA931155 AB028869 

    Unigene Cluster for BIRC5:

    Baculoviral IAP repeat-containing 5
    Hs.514527  [show with all ESTs]
    Unigene Representative Sequence: NM_001012271


    GeneLoc Exon Structure

    5/6 Alternative Splicing Database (ASD) splice patterns (SP) for BIRC5 (see all 6 )

    ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b · 6c
    SP1:                                -           -           -                     
    SP2:                                -     -     -           -                     
    SP3:                                -     -     -     -     -                     
    SP4:                                                                              
    SP5:                                                                              

    About this scheme

    ECgene alternative splicing isoforms for BIRC5

    3 Ensembl transcripts including schematic representations:
    ENST00000374948  ENST00000301633  ENST00000350051  
    (Experimental results according to 1GeneNote and GNF BioGPS,
    probe sets-to-genes annotations according to 2GeneAnnot , 3GeneTide , Sets of similar genes according to GeneDecks, Electronic Northern calculations according to data from UniGene (Build 219 Homo sapiens), SAGE tags according to CGAP, plus additional links to SOURCE, and/or GNF BioGPS, and/or EXPOLDB, and/or UniProtKB,
    Expression Assays from Applied Biosystems )
    About This Section

    BIRC5 expression in normal and diseased human tissues

     Applied Biosystems TaqMan ® Gene Expression Assays for BIRC5

    1 / 2 / 3

    7 probe-sets matching BIRC5 gene


    Affymetrix
    probe-set
    Array  GeneAnnot data GeneNote data GeneTide data
    # genes Sensitivity Specificity Correlation Length Gb_Accession Consensus Uniqueness Score Rank

    40532_at2, 3 U95-A 1 1.00 1.00 1.00 1.00 U75285 0.20 1.00 0.72 1

    210334_x_at2, 3 U133-A 1 1.00 1.00 -- -- AB028869 0.80 1.00 0.91 1

    202094_at2, 3 U133-A 1 1.00 1.00 -- -- AA648913 0.60 1.00 0.82 1

    202095_s_at2, 3 U133-A 1 1.00 1.00 -- -- NM_001168 0.60 1.00 0.82 1

    210334_x_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    202094_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --

    202095_s_at2 U133Plus2 1 1.00 1.00 -- -- -- -- -- -- --
    About this table
    Data from (Publications) and GNF BioGPS
        About these images
    About these images

    CGAP SAGE TAG: --

    SOURCE GeneReport for Unigene cluster: Hs.514527

    Expression variation in blood from EXPOLDB for BIRC5

    UniProtKB/Swiss-Prot: BIRC5_HUMAN, O15392
    Tissue specificity: Expressed only in fetal kidney and liver, and to lesser extent, lung and brain.
    Abundantly expressed in adenocarcinoma (lung, pancreas, colon, breast, and prostate) and in
    high-grade lymphomas. Also expressed in various renal cell carcinoma cell lines

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD and/or 5MGI Jun 06 2009, with possible further links to Flybase and/or WormBase, Gene Trees according to Ensembl)
    About This Section


    Orthologs for BIRC5 gene from 5/11 species (see all 11 )
    Organism Gene Locus Description Human
    Similarity
    NCBI accessions
    dog
    (Canis familiaris)
    BIRC51   -- baculoviral IAP repeat-containing 5 90.14(n)
    90.85(a)
    442936  NM_001003348.1  NP_001003348.1 
    chimpanzee
    (Pan troglodytes)
    BIRC51   -- baculoviral IAP repeat-containing 5 99.53(n)
    98.59(a)
    455276  XM_001156931.1  XP_001156931.1 
    cow
    (Bos taurus)
    BIRC51   -- baculoviral IAP repeat-containing 5 90.14(n)
    90.14(a)
    414925  NM_001001855.2  NP_001001855.2 
    mouse
    (Mus musculus)
    Birc51, 5 115
    baculoviral IAP repeat-containing 51, 5 82.62(n)1
    83.57(a)1
    117991  NM_009689.21  NP_033819.11 
     AB0138195  AB0367415  (see all 19)
    chicken
    (Gallus gallus)
    BIRC51   -- baculoviral IAP repeat-containing 5 (survivin) 65.93(n)
    61.03(a)
    374078  NM_001012318.1  NP_001012318.1 
    About this table        Species with no ortholog for BIRC5

    ENSEMBL Gene Tree for BIRC5
    (Paralogs according to 1HomoloGene
    and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
    About This Section

      --
    (According to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, and UniProtKB, Linkage Disequilibrium by HapMap, Genotyping Reagents from Applied Biosystems)
    About This Section


    10/152 NCBI SNPs in BIRC5 are shown (see all 152 )
    (Click for Applied Biosystems TaqMan ® Genotyping Assay)  (see all 73)
    ABGenomic DataTranscription DataAllele Frequencies
    SNP IDValidChr 17 posSequenceRecsAA
    Chg
    TypeMoreRecsAllele
    freq
    PopTotal
    sample
    More
    ------------
    rs22396801,2
    C,F,H,O73731378(+) TGCTCT/CTAAGG 3 -- ut31 ese320Minor allele frequency- C:0.23EA NA NS EU WA 3378
    rs10425411,2
    A,C,F,H73732965(+) TGGCTG/ACCAGC 3 -- ut31 ese316Minor allele frequency- A:0.36MN NS EU EA WA NA 1746
    rs10424891,2
    A,C,F,H73731801(+) GTCCCT/CGGCTC 3 -- ut31 ese39Minor allele frequency- C:0.40EA MN EU WA NA 2316
    rs10425421,2
    A,C,F,H73733023(+) CTAAGC/TGCAAC 3 -- ut31 ese36Minor allele frequency- T:0.40MN NS EU EA WA 764
    rs26616941,2
    C,F,H73732603(+) TATTTC/ATGCCA 3 -- ut315Minor allele frequency- A:0.18NS EU EA WA 594
    --
    rs80742281,2
    A,C,F73733491(+) aaaaaA/AA    
       
    /T/TT
    ttttt
    3 -- ng311NS 166
    rs37643831,2
    C,F,H73720446(-) tgcctA/Gtttcc 3 -- ng51 tfbs34Minor allele frequency- G:0.19EU EA WA 420
    rs20712141,2
    C,F,H73731186(+) CTGCGA/GAGAAA 3 E/K R/R mis1 syn120Minor allele frequency- G:0.30EA NA NS EU WA 2982
    rs99043411,2
    C,F,H73721962(+) ATCGCG/CGGACC 3 -- ut51 ese316Minor allele frequency- C:0.44EA NA MN NS EU 1742
    rs47895601,2
    A,C,F73733057(+) ATGTCC/TACATG 3 -- ut31 ese31Minor allele frequency- T:0.39NS 158
    About this table

    HapMap Linkage Disequilibrium images for BIRC5 (up to first 250kb)

    (in which this Gene is Involved, According to OMIM, UniProtKB, Novoseek, PharmGKB, Genatlas, GeneTests, Blood group antigen gene mutations by BGMUT, HGMD, GAD, HuGE Navigator, BCGD, and/or TGDB.)
    About This Section

    OMIM: 603352

    10/90 Novoseek disease relationships for BIRC5 gene (see all 90 )

    Disease   Score   Articles   PubMed IDs for Articles with Shared Sentences (# sentences)
    cancer 77.41 665 15359286 (5), 17167980 (5), 11956993 (5), 16731740 (4) (see all 99)
    tumors 76.82 953 11150435 (8), 12569609 (7), 16525657 (6), 12240548 (5) (see all 99)
    bladder cancer 61.83 113 14713774 (7), 16778475 (6), 16635519 (4), 11176843 (4) (see all 48)
    nsclc 57.92 143 18192073 (7), 16224523 (6), 16320585 (6), 15163019 (5) (see all 51)
    hepatocellular carcinoma 56.01 64 15195112 (4), 16086872 (3), 18296918 (3), 19173802 (3) (see all 35)
    metastasis 55.90 146 12168867 (5), 15991282 (4), 17094406 (4), 15062058 (4) (see all 83)
    laryngeal squamous cell carcinoma 55.59 23 18998509 (3), 12174930 (2), 15279637 (2), 16375115 (2) (see all 12)
    colon cancer 55.40 45 15685548 (4), 15566647 (4), 12441269 (3), 17270149 (3) (see all 24)
    prostate cancer 54.73 101 15076293 (6), 19435906 (5), 15735703 (5), 14724567 (4) (see all 39)
    breast cancer 54.60 217 17695451 (7), 16876381 (5), 19228734 (5), 18701842 (5) (see all 87)
    About this table

    Human Genome Epidemiology Navigator: BIRC5 (10 documents)

    (Possibly Related Articles in Doctor's Guide)
    About This Section

      --

    (in PubMed. Associations of this gene to articles via 1Novoseek, 2HGNC, 3Entrez Gene, 4UniProtKB/Swiss-Prot, 5UniProtKB/TrEMBL, 6GAD, and/or 7PharmGKB)
    About This Section

    10/1572 PubMed articles for BIRC5 gene (see all 1572 ):
    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section

     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)
    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, and/or H-InvDB)
    About This Section

    Entrez Gene: 332 HGNC: 593 AceView: BIRC5andAFMID Ensembl:ENSG00000089685 euGenes: HUgn332
    ECgene: BIRC5 H-InvDB: BIRC5
    (According to HUGE)
    About This Section

      --
    (According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section

    NameDescription
    ATLAS Chromosomes in Cancer entry for BIRC5 Genetics and Cytogenetics in Oncology and Haematology
    NIEHS-SNPshttp://egp.gs.washington.edu/data/birc5/
    (Available from WIS Yeda, Salk, Tufts)
    About This Section

    Licensable Technologies for BIRC5 gene:
     Salk Institute: Method and Composition for the Inhibition of Mitosis

    (Reagents available from Applied Biosystems, Antibodies and assays by Cell Signaling Technology, Abcam, Novus Biologicals,
    Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
    Enzo Life Sciences, and/or Tocris Bioscience)
    About This Section



    Products for BIRC5:
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