BIRC3 Gene
protein-coding GIFtS : 67
GCID: GC11 P102188
baculoviral IAP repeat containing 3 (Previous name: baculoviral IAP repeat-containing 3 ) (Previous symbol: API2 )
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Aliasesfor BIRC3 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Baculoviral IAP Repeat Containing 3 1 2 CIAP22 API21 2 3 5 Hiap-11 MIHC1 2 3 AIP12 RNF491 2 3 CIAP22 MALT21 2 HIAP12 Baculoviral IAP Repeat-Containing 31 2 Baculoviral IAP Repeat-Containing Protein 32 C-IAP23 Mammalian IAP Homolog C2 Apoptosis Inhibitor 22 3 TNFR2-TRAF Signaling Complex Protein2 Inhibitor Of Apoptosis Protein 12 3 C-IAP23 IAP-12 3 EC 6.3.2.-3 IAP Homolog C2 3 IAP13 RING Finger Protein 492 3 HIAP-11 TNFR2-TRAF-Signaling Complex Protein 12 3 HIAP12 HAIP12 5
Export aliases for BIRC3 gene to outside databases Previous GC identifers: GC11P104381 GC11P103545 GC11P102222 GC11P101725 GC11P101693 GC11P098114
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Summariesfor BIRC3 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for BIRC3 : This gene encodes a member of the IAP family of proteins that inhibit apoptosis by binding to tumor necrosis factor receptor-associated factors TRAF1 and TRAF2, probably by interfering with activation of ICE-like proteases. The encoded protein inhibits apoptosis induced by serum deprivation but does not affect apoptosis resulting from exposure to menadione, a potent inducer of free radicals. It contains 3 baculovirus IAP repeats and a ring finger domain. Transcript variants encoding the same isoform have been identified. (provided by RefSeq, Aug 2011) UniProtKB/Swiss-Prot: BIRC3_HUMAN, Q13489 Function : Multi-functional protein which regulates not only caspases and apoptosis, but also modulates inflammatorysignaling and immunity, mitogenic kinase signaling and cell proliferation, as well as cell invasion and metastasis. Acts as an E3 ubiquitin-protein ligase regulating NF-kappa-B signaling and regulates both canonical and non-canonical NF-kappa-B signaling by acting in opposite directions: acts as a positive regulator of the canonical pathway and suppresses constitutive activation of non-canonical NF-kappa-B signaling. The target proteins for its E3 ubiquitin-protein ligase activity include: RIPK1, RIPK2, RIPK3, RIPK4, CASP3, CASP7, CASP8, TRAF1, and BCL10. Acts as an important regulator of innate immune signaling via regulation of Toll-like receptors (TLRs), Nodlike receptors (NLRs) and RIG-I like receptors (RLRs), collectively referred to as pattern recognition receptors (PRRs). Protects cells from spontaneous formation of the ripoptosome, a large multi-protein complex that has the capability to kill cancer cells in a caspase-dependent and caspase-independent manner. Suppresses ripoptosome formation by ubiquitinating RIPK1 and CASP8 Gene Wiki entry for BIRC3 (Baculoviral IAP repeat-containing protein 3)
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Genomic Viewsfor BIRC3 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000011.9 NC_018922.1 NT_033899.8 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the BIRC3 gene promoter: CREB AP-1 ATF-2 deltaCREB c-Jun Other transcription factors Search SABiosciences Chromatin IP Primers for BIRC3 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat BIRC3
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 11q22 Ensembl cytogenetic band: 11q22.2 HGNC cytogenetic band: 11q22 BIRC3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 11 GeneLoc Exon Structure
GeneLoc location for GC11P102188: view genomic region
(about GC identifiers )
Start:
102,188,194 bp from pter
End:
102,210,134 bp from pter
Size:
21,941 bases
Orientation:
plus strand
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Proteinsfor BIRC3 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: BIRC3_HUMAN, Q13489 (See
protein sequence )Recommended Name: Baculoviral IAP repeat-containing protein 3 Size : 604 amino acids; 68372 Da
Subunit : Interacts with DIABLO/SMAC and with PRSS25; these interactions inhibit apoptotic suppressor activity. The BIRmotifs region interacts with TNF receptor associated factors 1 and 2 (TRAF1 and TRAF2) to form a heteromeric complex, which is then recruited to the tumor necrosis factor receptor 2 (TNFR2). Interacts with RIP1, RIP2, RIP3, RIP4 and USP19
Subcellular location : Cytoplasm. Nucleus
5 PDB 3D structures from and Proteopedia for BIRC3 :2UVL (3D)
  3EB5 (3D)
  3EB6 (3D)
  3M0A (3D)
  3M0D (3D)
 
Secondary accessions : Q16628 Q9HC27 Q9UP46Explore the universe of human proteins at neXtProt for BIRC3: NX_Q13489 Post-translational modifications:
Auto-ubiquitinated and degraded by the proteasome in apoptotic cells1
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q13489 BIRC3 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (2 alternative transcripts):
NP_001156.1 NP_892007.1 ENSEMBL proteins: ENSP00000263464 ENSP00000432907 ENSP00000436855 ENSP00000431718 Reactome Protein details: Q13489 Human Recombinant Protein Products: Gene Ontology (GO): 3 cellular component terms (GO ID links to tree view) : About this table
BIRC3 for ontologies About GeneDecksing BIRC3 Antibody Products: Assay Products for BIRC3:
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Protein
Domains / Familiesfor BIRC3 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
BIRC3 for domains About GeneDecksing 4 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q13489 ProtoNet protein and cluster: Q13489
3 Blocks protein families : IPB001315 CARD interaction domain IPB001370 Baculovirus inhibitor of apoptosis protein repeat (BIR) IPB001841 Zn-finger UniProtKB/Swiss-Prot: BIRC3_HUMAN, Q13489 Similarity : Belongs to the IAP familySimilarity : Contains 3 BIR repeatsSimilarity : Contains 1 CARD domainSimilarity : Contains 1 RING-type zinc finger
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Functionfor BIRC3 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: BIRC3_HUMAN, Q13489 Function : Multi-functional protein which regulates not only caspases and apoptosis, but also modulates inflammatorysignaling and immunity, mitogenic kinase signaling and cell proliferation, as well as cell invasion and metastasis. Acts as an E3 ubiquitin-protein ligase regulating NF-kappa-B signaling and regulates both canonical and non-canonical NF-kappa-B signaling by acting in opposite directions: acts as a positive regulator of the canonical pathway and suppresses constitutive activation of non-canonical NF-kappa-B signaling. The target proteins for its E3 ubiquitin-protein ligase activity include: RIPK1, RIPK2, RIPK3, RIPK4, CASP3, CASP7, CASP8, TRAF1, and BCL10. Acts as an important regulator of innate immune signaling via regulation of Toll-like receptors (TLRs), Nodlike receptors (NLRs) and RIG-I like receptors (RLRs), collectively referred to as pattern recognition receptors (PRRs). Protects cells from spontaneous formation of the ripoptosome, a large multi-protein complex that has the capability to kill cancer cells in a caspase-dependent and caspase-independent manner. Suppresses ripoptosome formation by ubiquitinating RIPK1 and CASP8 Enzyme regulation : USP19 regulates the stability of BIRC3/c-IAP2 by preventing its ubiquitinationEnzyme Number (IUBMB): EC 6.3.2.- 1
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for BIRC3 (see all 5 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for BIRC3 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): BIRC3 (NM_182962 ) Sino Biological Human cDNA Clone for BIRC3 DNA2.0 Custom Codon Optimized Gene
Synthesis Service for BIRC3 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat BIRC3
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for BIRC3
Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view) : About this table
BIRC3 for ontologies About GeneDecksing 5 GenomeRNAi human phenotypes for BIRC3 :Animal Models: Mouse knock-outs for BIRC3: Birc3 tm1.1Rbr Birc3 tm1Rgk 8 MGI mutant phenotypes (inferred from 4 alleles ) (MGI details for Birc3) :
BIRC3 for phenotypes About GeneDecksing
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Pathways & Interactionsfor BIRC3 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/27 super-pathways (see all 27 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 TWEAK Pathway 2 TRAF6 Mediated Induction of proinflammatory cytokines 3 Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways 4 Immune System 5 Apoptosis Modulation and Signaling
Pathway sources See GeneCards unified pathways Show all pathways 2 EMD Millipore Pathways for BIRC3 1 R&D Systems Pathway for BIRC3 5/12 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for BIRC3 (see all 12 )1
Cell Signaling Technology (CST) Pathway for BIRC3 2 GeneGo (Thomson Reuters) Pathways for BIRC3 5/12 BioSystems Pathways for BIRC3 (see all 12 ) 5/11
Reactome Pathways for BIRC3 (see all 11 )5/7
Kegg Pathways (Kegg details for BIRC3) (see all 7 ):
BIRC3 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for BIRC3 STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/84 Interacting proteins for BIRC3 (Q13489 1 , 3 ENSP00000263464 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 84 )Interactant Interaction Details GeneCard External ID(s) RIPK3 Q9Y572 1 , 3 , ENSP00000216274 4 EBI-517709,EBI-358587 I2D:
score=1 STRING: ENSP00000216274 TRAF2 Q12933 1 , 3 , ENSP00000247668 4 EBI-517709,EBI-1046651 I2D:
score=9 STRING: ENSP00000247668 DIABLO Q9NR28 1 , 3 , ENSP00000267169 4 EBI-517709,EBI-517508 I2D:
score=4 STRING: ENSP00000267169 RIPK2 O43353 1 , 3 , ENSP00000220751 4 EBI-517709,EBI-358522 I2D:
score=2 STRING: ENSP00000220751 RIPK1 Q13546 1 , 3 , ENSP00000259808 4 EBI-517709,EBI-358507 I2D:
score=2 STRING: ENSP00000259808
About this table Gene Ontology (GO): 5/16 biological process terms (GO ID links to tree view) (see all 16 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0006915 apoptotic process
IEA -- GO:0007166 cell surface receptor signaling pathway
TAS 8548810 GO:0034121 regulation of toll-like receptor signaling pathway
TAS -- GO:0038061 NIK/NF-kappaB cascade
TAS -- GO:0039535 regulation of RIG-I signaling pathway
TAS --
BIRC3 for ontologies About GeneDecksing
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Drugs & Compoundsfor BIRC3 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
BIRC3 for compounds About GeneDecksing Browse Tocris compounds for BIRC3 10/33 Novoseek chemical compound relationships for BIRC3 gene (see all 33 ) About this table
Compound
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
ciap2
95.4
64
17972100 (7), 20385093 (7), 16115895 (4), 16144937 (4) (see all 16 )
ciap1
93.7
38
15265700 (8), 20097753 (4), 18570872 (3), 17972100 (2) (see all 12 )
pdtc
49.7
5
12269771 (2), 14527959 (1)
curcumin
44.5
5
16243823 (1), 17640567 (1), 16219905 (1), 15911101 (1) (see all 5 )
ly294002
43.8
2
14762343 (1), 19051078 (1)
mg 132
41.9
1
14527959 (1)
parthenolide
41.6
1
11588049 (1)
triptolide
40.8
2
15972136 (1), 10224110 (1)
etoposide
40.2
3
15050749 (1), 12243753 (1), 9384571 (1)
doxorubicin
39.9
8
12926068 (2), 17311258 (1), 18434593 (1), 19746155 (1) (see all 6 )
Search CenterWatch for drugs/clinical trials and news about BIRC3
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Transcriptsfor BIRC3 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for BIRC3 gene (2 alternative transcripts): NM_001165.4 NM_182962.2 Unigene Cluster for BIRC3:
Baculoviral IAP repeat containing 3 Hs.127799 [show with all ESTs ] Unigene Representative Sequence: NM_001165 7 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000526421 ENST00000263464 (uc001pgx.3 ) ENST00000528940 ENST00000532808 ENST00000532609 ENST00000527309 ENST00000527336 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for BIRC3 (see all 5 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for BIRC3 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): BIRC3 (NM_182962 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for BIRC3 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat BIRC3
Additional cDNA sequence: AF070674.1 BC027485.2 BC037420.1 L43346.1 L49432.1 U45878.1
5 DOTS entries : DT.442857 DT.100813069
DT.92421251 DT.95177781 DT.100690941 24/228 AceView cDNA sequences (see all 228 ):
AW139145 BU663067 BU685791 AA261801 AI767171 AI950126 AI880582 AA761368 AI823946 AI354462 NM_001165 BU608931 AI797582 AV716229 AA252610 BM476485 AA534507 BU662287 AI417860 BX475964 AW590487 BU665537 BM956105 AI880555 GeneLoc Exon Structure 5 Alternative Splicing Database (ASD) splice patterns (SP) for BIRC3 About this scheme ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b · 4c ^ 5a · 5b · 5c ^ 6 ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12 ^ 13a · 13b SP1 :           -   -   -         -                   SP2 :                       -                   SP3 :                                         SP4 :                                         SP5 :       -                                  
ECgene alternative splicing isoforms for BIRC3
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Expression for BIRC3 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section BIRC3 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GTGTTTTTAT
About this image BIRC3 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table Stem Cell Differentiation: 1 LifeMap Cell Name Category Fetal cardiomyocytes (20 weeks) (Primary Cell)Heart, Myocardium Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See BIRC3 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for BIRC3 SOURCE GeneReport for Unigene cluster: Hs.127799 UniProtKB/Swiss-Prot: BIRC3_HUMAN, Q13489 Tissue specificity : Highly expressed in fetal lung, and kidney. In the adult, expression is mainly seen in lymphoidtissues, including spleen, thymus and peripheral blood lymphocytes SABiosciences Expression via Pathway-Focused PCR Arrays including BIRC3 (see all 13 ): Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for BIRC3Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat BIRC3 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat BIRC3 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat BIRC3 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for BIRC3
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Orthologsfor BIRC3 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of animals.
Orthologs for BIRC3 gene from 4/14 species (see all 14 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
Q9IA70_CHICK6
baculoviral IAP repeat-containing 2
70(a)
1 → many
1(186919506-186929678)
lizard (Anolis carolinensis)
Reptilia
--
--
65(a)
1 → many
3(192311974-192322685)
zebrafish (Danio rerio)
Actinopterygii
birc26
baculoviral IAP repeat-containing 2
51(a)
1 → many
21(21948887-21966212)
fruit fly (Drosophila melanogaster)
Insecta
Iap23 th1
anti-apoptosis apoptosis inhibitor3 thread1
28(a) 3 43.3(n) 1 35.18(a) 1
 
2 52D23 39753 1 NM_168645.1 1 NP_730098.1 1
ENSEMBL Gene Tree for BIRC3 (if available)TreeFam Gene Tree for BIRC3 (if available)
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Paralogsfor BIRC3 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section Paralogs for BIRC3 gene BIRC7 2 BIRC2 2 XIAP 2 BIRC8 2 18 SIMAP similar genes for BIRC3 using alignment to 4 protein entries: BIRC3_HUMAN (see all proteins ):C14orf23 EEF1E1 FLJ00047 C12orf76 GALK2 DYNC2LI1 TUBA1C NLN BIRC2 RQCD1 PFKFB3 COQ5 BIRC7 ILP3 LOC100996300 IDNK BIRC8 XIAP
BIRC3 for paralogs About GeneDecksing 1 Pseudogenes.org Pseudogene for BIRC3 PGOHUM00000257921
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Genomic Variantsfor BIRC3 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 11 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for BIRC3 (102188194 - 102210134 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for BIRC3: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing BIRC3
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Disorders
/ Diseasesfor BIRC3 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
BIRC3 for disorders About GeneDecksing
OMIM gene information: 601721
OMIM disorders : --UniProtKB/Swiss-Prot: BIRC3_HUMAN, Q13489
Note=A chromosomal aberration involving BIRC3 is recurrent in low-grade mucosa-associated lymphoid tissue (MALT lymphoma). Translocation t(11;18)(q21;q21) with MALT1. This translocation is found in approximately 50% of cytogenetically abnormal low-grade MALT lymphoma 20/70 diseases for BIRC3 (see all 70 ): About MalaCards marginal zone b-cell lymphoma splenic marginal zone lymphoma diffuse large b-cell lymphoma b-cell lymphomas patent ductus arteriosus non-small cell lung carcinoma anaplastic large cell lymphoma testicular germ cell tumor malignant pleural mesothelioma malt lymphoma non-hodgkin lymphoma chronic neutrophilic leukemia germ cell tumor muscular atrophy carotid stenosis burkitt's lymphoma adenoid cystic carcinoma edwards syndrome acute promyelocytic leukemia hodgkin's lymphoma 1 disease from the University of Copenhagen DISEASES database for BIRC3 :Lymphoma 10/38 Novoseek disease relationships for BIRC3 gene (see all 38 ) About this table
Disease
-log (P-Val)
Hits
PubMed IDs for Articles with Shared Sentences (# sentences)
malt lymphoma
75.1
17
10797525 (1), 11162514 (1), 19234489 (1), 11159207 (1) (see all 15 )
necrosis
61.1
22
10657935 (2), 11106668 (1), 17011514 (1), 16291753 (1) (see all 17 )
tumors
54.8
42
16983704 (3), 11484955 (3), 10657935 (2), 10815900 (2) (see all 26 )
lymphoma b-cell
50.5
8
11066071 (1), 16983704 (1), 14652825 (1)
leukemia
44.2
6
16638183 (2), 16983704 (1)
cancer
42
18
18570872 (3), 15856013 (2), 15265700 (1), 18992220 (1) (see all 13 )
lymphoma
39.8
4
16983704 (2), 10751367 (1)
leukemia t-cell
39.1
1
19564891 (1)
burkitt lymphoma
36.9
3
16983704 (1), 18503581 (1)
muscular atrophy spinal
27.9
1
11397650 (1)
Human Genome Epidemiology (HuGE) Navigator: BIRC3 (13 documents) Export disorders for BIRC3 gene to outside databases
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Publicationsfor BIRC3 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for BIRC3 gene, integrated from 9 sources (see all 431 ): (articles sorted by number of sources associating them with BIRC3) Utopia : connect your pdf to the dynamic world of online information
Suppression of apoptosis in mammalian cells by NAIP and a related family of IAP genes. (PubMed id 8552191) 1 , 2 , 3 Liston P.... Korneluk R.G. (1996) The TNFR2-TRAF signaling complex contains two novel proteins related to baculoviral inhibitor of apoptosis proteins. (PubMed id 8548810) 1 , 2 , 3 Rothe M.... Goeddel D.V. (1995) Structure of the MLT gene and molecular characterization of the genomic breakpoint junctions in the t(11;18)(q21;q21) of marginal zone B-cell lymphomas of MALT type. (PubMed id 11066071) 1 , 2 , 9 Baens M.... Marynen P. (2000) cIAP1/2 are direct E3 ligases conjugating diverse typ es of ubiquitin chains to receptor interacting proteins kinases 1 to 4 (RIP1-4) . (PubMed id 21931591) 1 , 2 Bertrand M.J....Vandenabeele P. (2011) The USP19 deubiquitinase regulates the stability of c -IAP1 and c-IAP2. (PubMed id 21849505) 1 , 2 Mei Y....Yang X. (2011) cIAP1 Localizes to the nuclear compartment and modulates the cell cycle. (PubMed id 15665297) 1 , 2 Samuel T....Reed J.C. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Vascular endothelial genes that are responsive to tumor necrosis factor-alpha in vitro are expressed in atherosclerotic lesions, including inhibitor of apoptosis protein-1, stannin, and two novel genes. (PubMed id 10233894) 1 , 2 Horrevoets A.J.G.... Pannekoek H. (1999) Cloning and expression of apoptosis inhibitory protein homologs that function to inhibit apoptosis and/or bind tumor necrosis factor receptor-associated factors. (PubMed id 8643514) 1 , 2 Uren A.G.... Vaux D.L. (1996) Expression of the inhibitor of apoptosis (IAP) family members in human neutrophils: up-regulation of cIAP2 by granulocyte colony-stimulating factor and overexpression of cIAP2 in chronic neutrophilic leukemia. (PubMed id 12393423) 1 , 9 Hasegawa T....Kitagawa S. (2003)
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External Searches for BIRC3 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing BIRC3 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
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Other Databases showing BIRC3 gene
(According to HUGE )
About This Section --
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Specialized Databases showing BIRC3 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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About This Section Patent Information for BIRC3 gene: Search GeneIP for patents involving BIRC3 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor BIRC3 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for BIRC3 OriGene shRNA RFP for BIRC3 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for BIRC3 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for BIRC3 OriGene Protein Over-expression Lysate for BIRC3 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for BIRC3 OriGene 3'-UTR Clone for BIRC3 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for BIRC3 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for BIRC3 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs OriGene Purified Protein for BIRC3 OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for BIRC3 OriGene Custom Protein Services for BIRC3 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat BIRC3 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing BIRC3 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat BIRC3 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat BIRC3 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat BIRC3 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat BIRC3
Antibodies & Assays for BIRC3   (cIAP2)
Search Tocris compounds for BIRC3
BIRC3 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for BIRC3
ThermoFisher Antibody for BIRC3
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat BIRC3
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