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Aliases & Descriptions for BIRC2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| API1 2, 3 | | C-IAP1 3 | | HIAP-2 3 | | HIAP2 2, 3 | | Hiap-2 2 | | IAP2 3 | | MIHB 1, 2, 3 | | RNF48 1, 2, 3 | | cIAP1 1, 2 | | hiap-2 1 |
| | | Descriptions |
|---|
| IAP homolog B 3 | | Inhibitor of apoptosis protein 2 3 | | NFR2-TRAF signalling complex protein 2 | | RING finger protein 48 3 | | TNFR2-TRAF-signaling complex protein 2 3 | | apoptosis inhibitor 1 2 | | baculoviral IAP repeat-containing 2 2 | | baculoviral IAP repeat-containing protein 2 2 |
|
| | Search outside databases for aliases for BIRC2 genePrevious GC identifers: GC11P104413 GC11P103575 GC11P102252 GC11P101757 GC11P101755 |
Summaries for BIRC2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for BIRC2: The protein encoded by this gene is a member of a family of proteins that inhibits apoptosis by binding to tumor necrosis factor receptor-associated factors TRAF1 and TRAF2, probably by interfering with activation of ICE-like proteases. This encoded protein inhibits apoptosis induced by serum deprivation and menadione, a potent inducer of free radicals. [provided by RefSeq] UniProtKB/Swiss-Prot: BIRC2_HUMAN, Q13490Function: Apoptotic suppressor. The BIR motifs region interacts with TNF receptor associated factors 1 and 2 (TRAF1 and TRAF2) to form an heteromeric complex, which is then recruited to the tumor necrosis factor receptor 2 (TNFR2)Gene Wiki entry for BIRC2 |
Genomic Location for BIRC2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the BIRC2 gene 
Entrez Gene cytogenetic band: 11q22 Ensembl cytogenetic band: 11q22.2 HGNC cytogenetic band: 11q22BIRC2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 11 GeneLoc Exon Structure GeneLoc location for GC11P101723:
(about GC identifiers)
Start:
|
101,723,176 bp from pter |
End:
|
101,754,611 bp from pter |
Size:
|
31,436 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000011.8 NT_033899.7
| Proteins for BIRC2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: BIRC2_HUMAN, Q13490 (See
protein sequence)Recommended Name: Baculoviral IAP repeat-containing protein 2 Size: 618 amino acids; 69900 Da
Subunit: Interacts with SMAC and with PRSS25; these interactions inhibit apoptotic suppressor activity
Subcellular location: Cytoplasm (Potential)
PDB structures from and Proteopedia :1QBH (3D)
 3D9T (3D)
 3D9U (3D)
 
Secondary accessions: Q16516 Q4TTG0Post-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_001157.1
ENSEMBL proteins: ENSP00000227758
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for BIRC2: Assays for BIRC2: | Protein
Domains/ Families for BIRC2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q13490
ProtoNet protein and cluster: Q13490 3 Blocks protein families: IPB001315 CARD interaction domain IPB001370 Baculovirus inhibitor of apoptosis protein repeat (BIR) IPB001841 Zn-finger
UniProtKB/Swiss-Prot: BIRC2_HUMAN, Q13490Similarity: Belongs to the IAP familySimilarity: Contains 3 BIR repeatsSimilarity: Contains 1 CARD domainSimilarity: Contains 1 RING-type zinc finger | Gene Function for BIRC2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001166
Applied Biosystems Silencer® siRNAs for BIRC2
Sigma-Aldrich siRNA and siRNA Panels for BIRC2  Sigma-Aldrich shRNA Panels and shRNA for BIRC2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001166                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001166                                  untagged cDNA clone in CMV expression vector: NM_001166 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001166
UniProtKB/Swiss-Prot: BIRC2_HUMAN, Q13490Function: Apoptotic suppressor. The BIR motifs region interacts with TNF receptor associated factors 1 and 2 (TRAF1 and TRAF2) to form an heteromeric complex, which is then recruited to the tumor necrosis factor receptor 2 (TNFR2)2 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Birc2):
3 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for BIRC2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
5/8 Sigma-Aldrich "Your Favorite Gene" Pathways for BIRC2 (Your Favorite Gene powered by Ingenuity) (see all 8
) 
Gene Network CentralTM Interacting Genes and Proteins Network for BIRC2 
5/73 Interacting proteins for BIRC2 (Q134901, 2 ENSP000002277583) via UniProtKB, MINT, and/or STRING (see all 73
)| Interactant | Interaction Details |
|---|
| GeneCard | External ID(s) |
|---|
| CASP7 | P552101, ENSP000002987003 | EBI-514538, EBI-523958 STRING (score=.999) | | CASP9 | P552111, ENSP000003302373 | EBI-514538, EBI-516799 STRING (score=.999) | | DIABLO | Q9NR281, ENSP000002671693 | EBI-514538, EBI-517508 STRING (score=.999) | | CASP3 | P425741, ENSP000003110323 | EBI-514538, EBI-524064 STRING (score=.998) | | TRAF2 | Q129331, ENSP000003526853 | EBI-514538, EBI-355744 STRING (score=.967) | About this table
5 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for BIRC2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for BIRC2 9 Novoseek chemical compound relationships for BIRC2 gene
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| ciap1 |
96.43 |
113 |
15265700 (10), 15665297 (7), 16282325 (6), 16510124 (6) (see all 17) |
| ciap2 |
92.84 |
18 |
18997792 (3), 17972100 (2), 15380346 (2), 16892011 (1) (see all 9) |
| sp 600125 |
55.08 |
4 |
17133355 (1), 18343029 (1) |
| wortmannin |
40.22 |
4 |
15995629 (2), 17074018 (1), 12888921 (1) |
| bryostatin 1 |
36.20 |
4 |
10581168 (4) |
| oligonucleotide |
1.73 |
3 |
15065090 (2), 17253596 (1) |
| agarose |
0.29 |
1 |
9492068 (1) |
| zinc |
0.00 |
1 |
18617897 (1) |
| vitamin-e |
0.00 |
2 |
15566391 (2) |
About this table
|
Transcripts for BIRC2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001166
Sigma-Aldrich siRNA and siRNA Panels for BIRC2  Sigma-Aldrich shRNA Panels and shRNA for BIRC2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001166 REFSEQ mRNAs for BIRC2 gene: NM_001166.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001166               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001166                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001166                                  untagged cDNA clone in CMV expression vector: NM_001166  Additional cDNA sequence: AK225856.1 AK303197.1 AK313446.1 BC016174.1 BC028578.1 BX647978.1 L49431.1 U37547.1 U45879.1 17 DOTS entries: DT.99955512 DT.455872 DT.101966491 DT.91808576 DT.95121789 DT.92410067 DT.92444769 DT.99969815 DT.100679229 DT.120734536 DT.100038470 DT.100730532 DT.92444764 DT.97806829 DT.102830794 DT.92444767 DT.95299594 24/250 AceView cDNA sequences (see all 250
):BP341109 T73007 AU280325 R83678 CB132520 CB117702 AI278103 BM703963 BU633609 AA969704 AA773975 AA702174 AU131149 AA361629 BC016174 AI016580 BQ439248 BF509777 T32378 AI718618 N78871 AW028956 BC028578 BM800246
highest scoring ESTs for BIRC2:U37547 AA190628 AA193578 AA194647 AA361629 AA421225 AA463671 AA504096 AA528657 AA564605 Unigene Cluster for BIRC2: Baculoviral IAP repeat-containing 2 Hs.696238 [show with all ESTs]Unigene Representative Sequence: BC028578
GeneLoc Exon Structure
5/6 Alternative Splicing Database (ASD) splice patterns (SP) for BIRC2 (see all 6
)
| ExUns: | 1a | · | 1b | ^ | 2 | ^ | 3a | · | 3b | · | 3c | ^ | 4a | · | 4b | ^ | 5 | ^ | 6 | ^ | 7a | · | 7b | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11 | ^ | 12 | |
| SP1: | |   | |   | - |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for BIRC2
1 Ensembl transcript including schematic representation: ENST00000227758
|
Expression for BIRC2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| BIRC2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for BIRC2
1 / 2 / 3 3 probe-sets matching BIRC2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TTCTAGTCTG
SOURCE GeneReport for Unigene cluster: Hs.696238
Expression variation in blood from EXPOLDB for BIRC2 UniProtKB/Swiss-Prot: BIRC2_HUMAN, Q13490Tissue specificity: Present in many fetal and adult tissues. Mainly expressed in adult skeletal muscle, thymus, testis, ovary, and pancreas, low or absent in brain and peripheral blood leukocytes |
Orthologs for BIRC2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for BIRC2 gene from 5/10 species (see all 10
)
About this table Species with no ortholog for BIRC2
ENSEMBL Gene Tree for BIRC2 | Paralogs for BIRC2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for BIRC2 gene
- BIRC32 BIRC72 ENSG000001630982 XIAP2 BIRC82
|
SNPs/Variants for BIRC2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for BIRC2 (up to first 250kb)
|
Disorders & Mutations for BIRC2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 601712
10/31 Novoseek disease relationships for BIRC2 gene (see all 31
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| necrosis |
61.70 |
17 |
8943045 (1), 11106668 (1), 15187025 (1), 17011514 (1) (see all 15) |
| tumors |
55.06 |
50 |
16983704 (3), 11484955 (3), 15187025 (2), 10815900 (2) (see all 29) |
| leukemia |
44.60 |
1 |
16983704 (1) |
| cancer |
44.10 |
25 |
18570872 (3), 18230607 (2), 18448338 (2), 19138149 (1) (see all 17) |
| carcinoma squamous cell |
34.14 |
7 |
15911110 (2), 18621506 (2), 11559525 (1), 12208731 (1) |
| myeloma |
32.34 |
2 |
16983704 (1) |
| prostate cancer |
31.19 |
4 |
15065090 (3), 11948968 (1) |
| lymphoma b-cell |
23.21 |
4 |
15187025 (1), 16983704 (1) |
| burkitt lymphoma |
19.91 |
1 |
16983704 (1) |
| leukemia lymphocytic chronic |
13.84 |
1 |
16983704 (1) |
About this table
Human Genome Epidemiology Navigator: BIRC2 (4 documents)
|
Medical News for BIRC2(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for BIRC2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/300 PubMed articles for BIRC2 gene (see all 300
):- Suppression of apoptosis in mammalian cells by NAIP and a related family of IAP genes. (PubMed id 8552191)2, 3, 4 Liston P.... Korneluk R.G. (1996)
- The TNFR2-TRAF signaling complex contains two novel proteins related to baculoviral inhibitor of apoptosis proteins. (PubMed id 8548810)2, 3, 4 Rothe M....Goeddel D.V. (1995)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Solution structure of a baculoviral inhibitor of apoptosis (IAP) repeat. (PubMed id 10404221)3, 4 Hinds M.G.... Day C.L. (1999)
- Cloning and expression of apoptosis inhibitory protein homologs that function to inhibit apoptosis and/or bind tumor necrosis factor receptor-associated factors. (PubMed id 8643514)3, 4 Uren A.G.... Vaux D.L. (1996)
- Expression of cIAP-1 correlates with nodal metastasis in squamous cell carcinoma of the tongue. (PubMed id 18621506)1, 3 Qi S....Omura K. (2008)
- Nuclear expression of cIAP-1, an apoptosis inhibiting protein, predicts lymph node metastasis and poor patient prognosis in head and neck squamous cell carcinomas. (PubMed id 15911110)1, 3 Tanimoto T....Matsubara O. (2005)
- c-IAP1 is cleaved by caspases to produce a proapoptotic C-terminal fragment. (PubMed id 11106668)1, 3 Clem R.J....Hardwick J.M. (2001)
- Expression of cIAP1, a target for 11q22 amplification, correlates with resistance of cervical cancers to radiotherapy. (PubMed id 12208731)1, 3 Imoto I....Inazawa J. (2002)
- hnRNP A1 regulates UV-induced NF-kappaB signalling through destabilization of cIAP1 mRNA. (PubMed id 18846111)1, 3 Zhao T.T....Holcik M. (2009)
|
Search for BIRC2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing BIRC2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing BIRC2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing BIRC2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for BIRC2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for BIRC2:

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